RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 CCDC102AQ96A19 550 aa20.86■□□□□ 0.93
SYNGR1-206ENST00000415332 SAGE1Q9NXZ1 904 aa20.86■□□□□ 0.93
SYNGR1-206ENST00000415332 RPS12P25398 132 aaKnown RBP20.85■□□□□ 0.93
SYNGR1-206ENST00000415332 KIF4BQ2VIQ3 1234 aa20.85■□□□□ 0.93
SYNGR1-206ENST00000415332 PLBD2Q8NHP8 589 aa20.85■□□□□ 0.93
SYNGR1-206ENST00000415332 CSRNP1Q96S65 589 aa20.85■□□□□ 0.93
SYNGR1-206ENST00000415332 PSME4Q14997 1843 aa20.85■□□□□ 0.93
SYNGR1-206ENST00000415332 CHL1O00533 1208 aa20.84■□□□□ 0.93
SYNGR1-206ENST00000415332 SLC10A3P09131 477 aa20.84■□□□□ 0.93
SYNGR1-206ENST00000415332 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
SYNGR1-206ENST00000415332 ANKRD13DQ6ZTN6 518 aa20.84■□□□□ 0.93
SYNGR1-206ENST00000415332 GGA3Q9NZ52 723 aa20.84■□□□□ 0.93
SYNGR1-206ENST00000415332 VIL1P09327 827 aaKnown RBP20.83■□□□□ 0.93
SYNGR1-206ENST00000415332 CDCA5Q96FF9 252 aa20.83■□□□□ 0.93
SYNGR1-206ENST00000415332 EYA3Q99504 573 aa20.83■□□□□ 0.93
SYNGR1-206ENST00000415332 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.93
SYNGR1-206ENST00000415332 RPS8P62241 208 aaKnown RBP20.82■□□□□ 0.92
SYNGR1-206ENST00000415332 CCDC146Q8IYE0 955 aa20.82■□□□□ 0.92
SYNGR1-206ENST00000415332 IRS4O14654 1257 aaPredicted RBP20.81■□□□□ 0.92
SYNGR1-206ENST00000415332 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
SYNGR1-206ENST00000415332 HDGFL1Q5TGJ6 251 aa20.81■□□□□ 0.92
SYNGR1-206ENST00000415332 SULF1Q8IWU6 871 aa20.81■□□□□ 0.92
SYNGR1-206ENST00000415332 SEC31BQ9NQW1 1179 aa20.81■□□□□ 0.92
SYNGR1-206ENST00000415332 PCDH10Q9P2E7 1040 aa20.81■□□□□ 0.92
SYNGR1-206ENST00000415332 RASAL3Q86YV0 1011 aa20.8■□□□□ 0.92
SYNGR1-206ENST00000415332 ZC3H12CQ9C0D7 883 aaKnown RBP20.8■□□□□ 0.92
SYNGR1-206ENST00000415332 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
SYNGR1-206ENST00000415332 SCARF1Q14162 830 aa20.79■□□□□ 0.92
SYNGR1-206ENST00000415332 ANGEL2Q5VTE6 544 aaKnown RBP20.79■□□□□ 0.92
SYNGR1-206ENST00000415332 PODXL2Q9NZ53 605 aa20.79■□□□□ 0.92
SYNGR1-206ENST00000415332 SCAF8Q9UPN6 1271 aaKnown RBP20.79■□□□□ 0.92
SYNGR1-206ENST00000415332 UFL1O94874 794 aa20.78■□□□□ 0.92
SYNGR1-206ENST00000415332 MOB2Q70IA6 237 aa20.78■□□□□ 0.92
SYNGR1-206ENST00000415332 CTU1Q7Z7A3 348 aaKnown RBP20.78■□□□□ 0.92
SYNGR1-206ENST00000415332 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
SYNGR1-206ENST00000415332 PAPPA2Q9BXP8 1791 aa20.77■□□□□ 0.92
SYNGR1-206ENST00000415332 ZNF280AP59817 542 aaPredicted RBP20.77■□□□□ 0.92
SYNGR1-206ENST00000415332 TRIM28Q13263 835 aaKnown RBP20.76■□□□□ 0.91
SYNGR1-206ENST00000415332 RSBN1LQ6PCB5 846 aaPredicted RBP20.76■□□□□ 0.91
SYNGR1-206ENST00000415332 JARID2Q92833 1246 aaPredicted RBP20.76■□□□□ 0.91
SYNGR1-206ENST00000415332 ANKIB1Q9P2G1 1089 aa20.76■□□□□ 0.91
SYNGR1-206ENST00000415332 G3V3G9 751 aa20.75■□□□□ 0.91
SYNGR1-206ENST00000415332 DCAF8Q5TAQ9 597 aa20.75■□□□□ 0.91
SYNGR1-206ENST00000415332 CCDC85AQ96PX6 553 aaPredicted RBP20.75■□□□□ 0.91
SYNGR1-206ENST00000415332 GGA1Q9UJY5 639 aa20.75■□□□□ 0.91
SYNGR1-206ENST00000415332 ZNF646O15015 1829 aaPredicted RBP20.75■□□□□ 0.91
SYNGR1-206ENST00000415332 SPEF2Q9C093 1822 aa20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 ZNF609O15014 1411 aa20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 HOXB7P09629 217 aa20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 DUSP27Q5VZP5 1158 aa20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 ZBTB38Q8NAP3 1195 aaPredicted RBP20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 AGBL3Q8NEM8 1001 aa20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 GMLQ99445 158 aa20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 HYPKQ9NX55 129 aa20.74■□□□□ 0.91
SYNGR1-206ENST00000415332 WTIPA6NIX2 430 aaPredicted RBP20.73■□□□□ 0.91
SYNGR1-206ENST00000415332 PRAMEF18Q5VWM3 479 aa20.73■□□□□ 0.91
SYNGR1-206ENST00000415332 PHAXQ9H814 394 aaKnown RBP20.73■□□□□ 0.91
SYNGR1-206ENST00000415332 MYOZ2Q9NPC6 264 aa20.73■□□□□ 0.91
SYNGR1-206ENST00000415332 HPS5Q9UPZ3 1129 aa20.73■□□□□ 0.91
SYNGR1-206ENST00000415332 UBE2Q2LH0YL09 131 aa20.72■□□□□ 0.91
SYNGR1-206ENST00000415332 TBC1D8O95759 1140 aa20.72■□□□□ 0.91
SYNGR1-206ENST00000415332 RIC3Q7Z5B4 369 aa20.72■□□□□ 0.91
SYNGR1-206ENST00000415332 USP17L8P0C7I0 530 aa20.71■□□□□ 0.91
SYNGR1-206ENST00000415332 REM2Q8IYK8 340 aaPredicted RBP20.71■□□□□ 0.91
SYNGR1-206ENST00000415332 ZNF296Q8WUU4 475 aaPredicted RBP20.71■□□□□ 0.91
SYNGR1-206ENST00000415332 MYD88Q99836 296 aa20.71■□□□□ 0.91
SYNGR1-206ENST00000415332 FKBP1BP68106 108 aa20.7■□□□□ 0.9
SYNGR1-206ENST00000415332 RALBP1Q15311 655 aa20.7■□□□□ 0.9
SYNGR1-206ENST00000415332 RUNDC1Q96C34 613 aa20.7■□□□□ 0.9
SYNGR1-206ENST00000415332 MXD3Q9BW11 206 aa20.7■□□□□ 0.9
SYNGR1-206ENST00000415332 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
SYNGR1-206ENST00000415332 NBPF9Q3BBW0 867 aa20.69■□□□□ 0.9
SYNGR1-206ENST00000415332 CCDC152Q4G0S7 254 aa20.69■□□□□ 0.9
SYNGR1-206ENST00000415332 PRPF38BQ5VTL8 546 aaKnown RBP20.69■□□□□ 0.9
SYNGR1-206ENST00000415332 PITPNM2Q9BZ72 1349 aa20.69■□□□□ 0.9
SYNGR1-206ENST00000415332 MYH3P11055 1940 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 USP17L3A6NCW0 530 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 USP17L4A6NCW7 530 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 PDE8AO60658 829 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 PCCAP05165 728 aaPredicted RBP20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 USP17L1Q7RTZ2 530 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 HDAC9Q9UKV0 1011 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 XDHP47989 1333 aa20.68■□□□□ 0.9
SYNGR1-206ENST00000415332 ELL2O00472 640 aaPredicted RBP20.67■□□□□ 0.9
SYNGR1-206ENST00000415332 MKRN3Q13064 507 aaKnown RBP20.67■□□□□ 0.9
SYNGR1-206ENST00000415332 ATP2B4P23634 1241 aa20.66■□□□□ 0.9
SYNGR1-206ENST00000415332 PODNQ7Z5L7 613 aa20.66■□□□□ 0.9
SYNGR1-206ENST00000415332 ANKRD18AQ8IVF6 992 aa20.66■□□□□ 0.9
SYNGR1-206ENST00000415332 CCDC191Q8NCU4 936 aa20.66■□□□□ 0.9
SYNGR1-206ENST00000415332 TM4SF4P48230 202 aa20.65■□□□□ 0.9
SYNGR1-206ENST00000415332 R3HDMLQ9H3Y0 253 aa20.65■□□□□ 0.9
SYNGR1-206ENST00000415332 CWC25Q9NXE8 425 aaPredicted RBP20.65■□□□□ 0.9
SYNGR1-206ENST00000415332 ADAMTS8Q9UP79 889 aa20.65■□□□□ 0.9
SYNGR1-206ENST00000415332 GPR25O00155 361 aa20.64■□□□□ 0.89
SYNGR1-206ENST00000415332 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
SYNGR1-206ENST00000415332 TTLL12Q14166 644 aaPredicted RBP20.64■□□□□ 0.89
SYNGR1-206ENST00000415332 PKN2Q16513 984 aaKnown RBP20.64■□□□□ 0.89
SYNGR1-206ENST00000415332 MYBBP1AQ9BQG0 1328 aaKnown RBP20.63■□□□□ 0.89
SYNGR1-206ENST00000415332 WNT10BO00744 389 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms