RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 STK31Q9BXU1 1019 aa24.1■■□□□ 1.45
AP1S3-205ENST00000415298 RBM27Q9P2N5 1060 aaKnown RBP24.1■■□□□ 1.45
AP1S3-205ENST00000415298 TRIM27P14373 513 aa24.1■■□□□ 1.45
AP1S3-205ENST00000415298 ZBTB12Q9Y330 459 aaPredicted RBP24.1■■□□□ 1.45
AP1S3-205ENST00000415298 PDIA6Q15084 440 aa24.09■■□□□ 1.45
AP1S3-205ENST00000415298 KMT5BQ4FZB7 885 aa24.09■■□□□ 1.45
AP1S3-205ENST00000415298 A1BGP04217 495 aa24.09■■□□□ 1.45
AP1S3-205ENST00000415298 SRLQ86TD4 932 aa24.09■■□□□ 1.45
AP1S3-205ENST00000415298 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
AP1S3-205ENST00000415298 PALLDQ8WX93 1383 aa24.09■■□□□ 1.45
AP1S3-205ENST00000415298 MYL6BP14649 208 aa24.08■■□□□ 1.45
AP1S3-205ENST00000415298 BIRC2Q13490 618 aa24.08■■□□□ 1.45
AP1S3-205ENST00000415298 ZKSCAN2Q63HK3 967 aa24.08■■□□□ 1.45
AP1S3-205ENST00000415298 TEX35Q5T0J7 233 aa24.08■■□□□ 1.44
AP1S3-205ENST00000415298 SUGP1Q8IWZ8 645 aaKnown RBP24.08■■□□□ 1.44
AP1S3-205ENST00000415298 LOC102724428A0A0B4J2F2 783 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 SIK1P57059 783 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 JMYQ8N9B5 988 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 CCDC191Q8NCU4 936 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 GPT2Q8TD30 523 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 BTAF1O14981 1849 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 ANAPC15P60006 121 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 UVSSAQ2YD98 709 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 C11orf91Q3C1V1 193 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 ATF7IPQ6VMQ6 1270 aa24.07■■□□□ 1.44
AP1S3-205ENST00000415298 KLHL33A6NCF5 533 aa24.06■■□□□ 1.44
AP1S3-205ENST00000415298 TMEM63CQ9P1W3 806 aa24.06■■□□□ 1.44
AP1S3-205ENST00000415298 DBF4Q9UBU7 674 aaPredicted RBP24.06■■□□□ 1.44
AP1S3-205ENST00000415298 NHSQ6T4R5 1651 aa24.06■■□□□ 1.44
AP1S3-205ENST00000415298 ITFG2Q969R8 447 aa24.06■■□□□ 1.44
AP1S3-205ENST00000415298 TSPY26PQ9H489 355 aa24.06■■□□□ 1.44
AP1S3-205ENST00000415298 PDZRN3Q9UPQ7 1066 aa24.06■■□□□ 1.44
AP1S3-205ENST00000415298 NBPF26B4DH59 902 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 ITPK1Q13572 414 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 NBPF14Q5TI25 921 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 NBPF15Q8N660 670 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 NEK11Q8NG66 645 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 PRDM16Q9HAZ2 1276 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 MAP2K2P36507 400 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 FLIIQ13045 1269 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 RPAINQ86UA6 219 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 PACS2Q86VP3 889 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 FOXD4L1Q9NU39 408 aa24.05■■□□□ 1.44
AP1S3-205ENST00000415298 F6X3S4 739 aa24.04■■□□□ 1.44
AP1S3-205ENST00000415298 K7ELQ4 463 aaPredicted RBP24.04■■□□□ 1.44
AP1S3-205ENST00000415298 COG6Q9Y2V7 657 aa24.04■■□□□ 1.44
AP1S3-205ENST00000415298 RRP15Q9Y3B9 282 aaKnown RBP24.04■■□□□ 1.44
AP1S3-205ENST00000415298 AIMP1Q12904 312 aaKnown RBP24.03■■□□□ 1.44
AP1S3-205ENST00000415298 PPP2R5AQ15172 486 aa24.03■■□□□ 1.44
AP1S3-205ENST00000415298 MCTP2Q6DN12 878 aa24.03■■□□□ 1.44
AP1S3-205ENST00000415298 NAA30Q147X3 362 aaPredicted RBP24.03■■□□□ 1.44
AP1S3-205ENST00000415298 ANKRD20A12PQ8NF67 263 aa24.03■■□□□ 1.44
AP1S3-205ENST00000415298 SMARCC1Q92922 1105 aaPredicted RBP24.03■■□□□ 1.44
AP1S3-205ENST00000415298 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
AP1S3-205ENST00000415298 CCDC196A0A1B0GTZ2 297 aa24.02■■□□□ 1.44
AP1S3-205ENST00000415298 IPO8O15397 1037 aaKnown RBP24.02■■□□□ 1.44
AP1S3-205ENST00000415298 ARID4AP29374 1257 aaPredicted RBP24.02■■□□□ 1.44
AP1S3-205ENST00000415298 E2F4Q16254 413 aa24.02■■□□□ 1.44
AP1S3-205ENST00000415298 ZSCAN26Q16670 478 aa24.02■■□□□ 1.44
AP1S3-205ENST00000415298 TPM3P06753 285 aa24.02■■□□□ 1.44
AP1S3-205ENST00000415298 CYP19A1P11511 503 aaPredicted RBP24.02■■□□□ 1.44
AP1S3-205ENST00000415298 NUCB2P80303 420 aa24.02■■□□□ 1.44
AP1S3-205ENST00000415298 BMS1Q14692 1282 aaKnown RBP24.02■■□□□ 1.44
AP1S3-205ENST00000415298 LRP10Q7Z4F1 713 aa24.02■■□□□ 1.44
AP1S3-205ENST00000415298 MAGEA9P43362 315 aa24.01■■□□□ 1.43
AP1S3-205ENST00000415298 SLFNL1Q499Z3 407 aa24.01■■□□□ 1.43
AP1S3-205ENST00000415298 DZIP1LQ8IYY4 767 aaKnown RBP24.01■■□□□ 1.43
AP1S3-205ENST00000415298 PDE3AQ14432 1141 aa24.01■■□□□ 1.43
AP1S3-205ENST00000415298 LRRFIP2Q9Y608 721 aaKnown RBP24.01■■□□□ 1.43
AP1S3-205ENST00000415298 MRVI1Q9Y6F6 885 aa24.01■■□□□ 1.43
AP1S3-205ENST00000415298 MPHOSPH10O00566 681 aaKnown RBP24■■□□□ 1.43
AP1S3-205ENST00000415298 FAM184AQ8NB25 1140 aa24■■□□□ 1.43
AP1S3-205ENST00000415298 CEP89Q96ST8 783 aa24■■□□□ 1.43
AP1S3-205ENST00000415298 PAXBP1Q9Y5B6 917 aa24■■□□□ 1.43
AP1S3-205ENST00000415298 PRPF40AO75400 957 aaKnown RBP24■■□□□ 1.43
AP1S3-205ENST00000415298 ARHGAP45Q92619 1136 aa24■■□□□ 1.43
AP1S3-205ENST00000415298 ZNF330Q9Y3S2 320 aaPredicted RBP24■■□□□ 1.43
AP1S3-205ENST00000415298 MAP9Q49MG5 647 aa23.99■■□□□ 1.43
AP1S3-205ENST00000415298 TMEM57Q8N5G2 664 aa23.99■■□□□ 1.43
AP1S3-205ENST00000415298 STARD3NLO95772 234 aa23.99■■□□□ 1.43
AP1S3-205ENST00000415298 COPS6Q7L5N1 327 aa23.99■■□□□ 1.43
AP1S3-205ENST00000415298 CCDC112Q8NEF3 446 aa23.99■■□□□ 1.43
AP1S3-205ENST00000415298 TEX13AQ9BXU3 409 aaPredicted RBP23.98■■□□□ 1.43
AP1S3-205ENST00000415298 ZBTB1Q9Y2K1 713 aa23.98■■□□□ 1.43
AP1S3-205ENST00000415298 CACNA1FO60840 1977 aa23.98■■□□□ 1.43
AP1S3-205ENST00000415298 LAMB4A4D0S4 1761 aa23.98■■□□□ 1.43
AP1S3-205ENST00000415298 TJP1Q07157 1748 aa23.98■■□□□ 1.43
AP1S3-205ENST00000415298 XAGE3Q8WTP9 111 aa23.98■■□□□ 1.43
AP1S3-205ENST00000415298 HYPKQ9NX55 129 aa23.98■■□□□ 1.43
AP1S3-205ENST00000415298 PYCARDQ9ULZ3 195 aa23.98■■□□□ 1.43
AP1S3-205ENST00000415298 ADCY5O95622 1261 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 LIG1P18858 919 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 RABEP1Q15276 862 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 SLC4A10Q6U841 1118 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 PTPRCP08575 1304 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 PI4KAP2A4QPH2 592 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 GPS2Q13227 327 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 PI4KAP1Q8N8J0 262 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 LINC00116Q8NCU8 138 aa23.97■■□□□ 1.43
AP1S3-205ENST00000415298 LRRC4BQ9NT99 713 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms