RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 NUCB1Q02818 461 aa16.46■□□□□ 0.23
CNN3-203ENST00000415017 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
CNN3-203ENST00000415017 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
CNN3-203ENST00000415017 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
CNN3-203ENST00000415017 DPEP1P16444 411 aa16.45■□□□□ 0.22
CNN3-203ENST00000415017 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
CNN3-203ENST00000415017 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.226e-7■■□□□ 14
CNN3-203ENST00000415017 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
CNN3-203ENST00000415017 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
CNN3-203ENST00000415017 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
CNN3-203ENST00000415017 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
CNN3-203ENST00000415017 CNKSR1Q969H4 720 aa16.44■□□□□ 0.22
CNN3-203ENST00000415017 SIL1Q9H173 461 aa16.44■□□□□ 0.22
CNN3-203ENST00000415017 FER1L6Q2WGJ9 1857 aa16.44■□□□□ 0.22
CNN3-203ENST00000415017 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
CNN3-203ENST00000415017 DUOX1Q9NRD9 1551 aa16.43■□□□□ 0.22
CNN3-203ENST00000415017 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
CNN3-203ENST00000415017 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
CNN3-203ENST00000415017 MPHOSPH8Q99549 860 aa16.43■□□□□ 0.22
CNN3-203ENST00000415017 LRRCC1Q9C099 1032 aa16.43■□□□□ 0.22
CNN3-203ENST00000415017 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
CNN3-203ENST00000415017 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
CNN3-203ENST00000415017 PDE8BO95263 885 aa16.42■□□□□ 0.22
CNN3-203ENST00000415017 FGFR2P21802 821 aa16.42■□□□□ 0.22
CNN3-203ENST00000415017 CHRNDQ07001 517 aa16.42■□□□□ 0.22
CNN3-203ENST00000415017 TFCP2Q12800 502 aa16.42■□□□□ 0.22
CNN3-203ENST00000415017 CHD1LQ86WJ1 897 aa16.42■□□□□ 0.22
CNN3-203ENST00000415017 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
CNN3-203ENST00000415017 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
CNN3-203ENST00000415017 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
CNN3-203ENST00000415017 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
CNN3-203ENST00000415017 ZBTB22O15209 634 aa16.41■□□□□ 0.22
CNN3-203ENST00000415017 PRPF40BQ6NWY9 871 aaKnown RBP16.41■□□□□ 0.22
CNN3-203ENST00000415017 ZNF609O15014 1411 aa16.41■□□□□ 0.22
CNN3-203ENST00000415017 ANKRD45Q5TZF3 282 aa16.4■□□□□ 0.22
CNN3-203ENST00000415017 SLC51AQ86UW1 340 aa16.4■□□□□ 0.22
CNN3-203ENST00000415017 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
CNN3-203ENST00000415017 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
CNN3-203ENST00000415017 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
CNN3-203ENST00000415017 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
CNN3-203ENST00000415017 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
CNN3-203ENST00000415017 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
CNN3-203ENST00000415017 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
CNN3-203ENST00000415017 AKAP11Q9UKA4 1901 aa16.39■□□□□ 0.21
CNN3-203ENST00000415017 SMARCA5O60264 1052 aaPredicted RBP16.39■□□□□ 0.21
CNN3-203ENST00000415017 PDE4AP27815 886 aa16.39■□□□□ 0.21
CNN3-203ENST00000415017 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
CNN3-203ENST00000415017 CC2D2BQ6DHV5 1058 aa16.39■□□□□ 0.21
CNN3-203ENST00000415017 C15orf52Q6ZUT6 534 aaKnown RBP16.39■□□□□ 0.21
CNN3-203ENST00000415017 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
CNN3-203ENST00000415017 SYT17Q9BSW7 474 aa16.39■□□□□ 0.21
CNN3-203ENST00000415017 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
CNN3-203ENST00000415017 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
CNN3-203ENST00000415017 UBE4AQ14139 1066 aa16.38■□□□□ 0.21
CNN3-203ENST00000415017 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
CNN3-203ENST00000415017 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
CNN3-203ENST00000415017 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
CNN3-203ENST00000415017 AKAP2Q9Y2D5 859 aa16.38■□□□□ 0.21
CNN3-203ENST00000415017 XDHP47989 1333 aa16.38■□□□□ 0.21
CNN3-203ENST00000415017 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
CNN3-203ENST00000415017 GPSM2P81274 684 aa16.37■□□□□ 0.21
CNN3-203ENST00000415017 PUM3Q15397 648 aaKnown RBP16.37■□□□□ 0.21
CNN3-203ENST00000415017 C16orf71Q8IYS4 520 aaPredicted RBP16.37■□□□□ 0.21
CNN3-203ENST00000415017 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
CNN3-203ENST00000415017 HELBQ8NG08 1087 aaPredicted RBP16.37■□□□□ 0.21
CNN3-203ENST00000415017 OSBPL3Q9H4L5 887 aa16.37■□□□□ 0.21
CNN3-203ENST00000415017 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
CNN3-203ENST00000415017 STAP2Q9UGK3 403 aa16.37■□□□□ 0.21
CNN3-203ENST00000415017 LEMD3Q9Y2U8 911 aa16.37■□□□□ 0.21
CNN3-203ENST00000415017 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
CNN3-203ENST00000415017 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
CNN3-203ENST00000415017 TAF5LO75529 589 aa16.36■□□□□ 0.21
CNN3-203ENST00000415017 LPIN2Q92539 896 aa16.36■□□□□ 0.21
CNN3-203ENST00000415017 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
CNN3-203ENST00000415017 APBB1O00213 710 aa16.35■□□□□ 0.21
CNN3-203ENST00000415017 TIMM10P62072 90 aa16.35■□□□□ 0.21
CNN3-203ENST00000415017 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
CNN3-203ENST00000415017 DALRD3Q5D0E6 543 aaKnown RBP16.35■□□□□ 0.21
CNN3-203ENST00000415017 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
CNN3-203ENST00000415017 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
CNN3-203ENST00000415017 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
CNN3-203ENST00000415017 ZNF646O15015 1829 aaPredicted RBP16.35■□□□□ 0.21
CNN3-203ENST00000415017 CHD4Q14839 1912 aa16.35■□□□□ 0.21
CNN3-203ENST00000415017 SNAP23O00161 211 aa16.34■□□□□ 0.21
CNN3-203ENST00000415017 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
CNN3-203ENST00000415017 TBC1D16Q8TBP0 767 aa16.34■□□□□ 0.21
CNN3-203ENST00000415017 OTUD7AQ8TE49 926 aaPredicted RBP16.34■□□□□ 0.21
CNN3-203ENST00000415017 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
CNN3-203ENST00000415017 TLR7Q9NYK1 1049 aaKnown RBP16.34■□□□□ 0.21
CNN3-203ENST00000415017 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
CNN3-203ENST00000415017 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
CNN3-203ENST00000415017 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
CNN3-203ENST00000415017 PSME4Q14997 1843 aa16.33■□□□□ 0.21
CNN3-203ENST00000415017 SBF1O95248 1867 aa16.33■□□□□ 0.21
CNN3-203ENST00000415017 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
CNN3-203ENST00000415017 AACSQ86V21 672 aa16.33■□□□□ 0.2
CNN3-203ENST00000415017 MPNDQ8N594 471 aa16.33■□□□□ 0.2
CNN3-203ENST00000415017 PSMD1Q99460 953 aa16.33■□□□□ 0.2
CNN3-203ENST00000415017 PPP1R1BQ9UD71 204 aaPredicted RBP16.33■□□□□ 0.2
CNN3-203ENST00000415017 AOX1Q06278 1338 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms