RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
RIF1-202ENST00000414861 RPGRQ92834 1020 aaKnown RBP11.91□□□□□ -0.5
RIF1-202ENST00000414861 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
RIF1-202ENST00000414861 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
RIF1-202ENST00000414861 KIF13BQ9NQT8 1826 aa11.91□□□□□ -0.5
RIF1-202ENST00000414861 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
RIF1-202ENST00000414861 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
RIF1-202ENST00000414861 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
RIF1-202ENST00000414861 DBNLQ9UJU6 430 aaKnown RBP11.91□□□□□ -0.5
RIF1-202ENST00000414861 ARAP2Q8WZ64 1704 aa11.91□□□□□ -0.5
RIF1-202ENST00000414861 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
RIF1-202ENST00000414861 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
RIF1-202ENST00000414861 BSDC1Q9NW68 430 aaPredicted RBP11.9□□□□□ -0.5
RIF1-202ENST00000414861 SNAP23O00161 211 aa11.9□□□□□ -0.5
RIF1-202ENST00000414861 IFIT2P09913 472 aaKnown RBP11.9□□□□□ -0.5
RIF1-202ENST00000414861 SRGNP10124 158 aa11.9□□□□□ -0.5
RIF1-202ENST00000414861 GRAPQ13588 217 aa11.9□□□□□ -0.5
RIF1-202ENST00000414861 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
RIF1-202ENST00000414861 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 TAF5LO75529 589 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
RIF1-202ENST00000414861 TIMM10P62072 90 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 CHRNDQ07001 517 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 OSBPL3Q9H4L5 887 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 LRRC37AA6NMS7 1700 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 SRCAPQ6ZRS2 3230 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 PDE8BO95263 885 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 ADORA1P30542 326 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 PDE6BP35913 854 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 PI4K2BQ8TCG2 481 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 GPR108Q9NPR9 543 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 MINPP1Q9UNW1 487 aa11.89□□□□□ -0.51
RIF1-202ENST00000414861 KIAA1551Q9HCM1 1747 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 AK9Q5TCS8 1911 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 WTIPA6NIX2 430 aaPredicted RBP11.88□□□□□ -0.51
RIF1-202ENST00000414861 TTC22Q5TAA0 569 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 CHRNA5P30532 468 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 ATP2B3Q16720 1220 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 RBM17Q96I25 401 aaKnown RBP11.88□□□□□ -0.51
RIF1-202ENST00000414861 NEUROD6Q96NK8 337 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
RIF1-202ENST00000414861 NPR1P16066 1061 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 CRAMP1Q96RY5 1269 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 LTBP1Q14766 1721 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 FGFR2P21802 821 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 PUM3Q15397 648 aaKnown RBP11.87□□□□□ -0.51
RIF1-202ENST00000414861 BMP2KLQ5H9B9 411 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 AOX1Q06278 1338 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 TTC41PQ6P2S7 1318 aa11.87□□□□□ -0.51
RIF1-202ENST00000414861 PTGER2P43116 358 aa11.86□□□□□ -0.51
RIF1-202ENST00000414861 XAGE2Q96GT9 111 aa11.86□□□□□ -0.51
RIF1-202ENST00000414861 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
RIF1-202ENST00000414861 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
RIF1-202ENST00000414861 MASTLQ96GX5 879 aa11.86□□□□□ -0.51
RIF1-202ENST00000414861 AKAP11Q9UKA4 1901 aa11.86□□□□□ -0.51
RIF1-202ENST00000414861 POLD1P28340 1107 aa11.85□□□□□ -0.51
RIF1-202ENST00000414861 C8orf34Q49A92 452 aa11.85□□□□□ -0.51
RIF1-202ENST00000414861 OLFM4Q6UX06 510 aa11.85□□□□□ -0.51
RIF1-202ENST00000414861 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.519e-15■□□□□ 10.6
RIF1-202ENST00000414861 H0YIN7 160 aa11.85□□□□□ -0.51
RIF1-202ENST00000414861 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
RIF1-202ENST00000414861 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
RIF1-202ENST00000414861 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
RIF1-202ENST00000414861 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
RIF1-202ENST00000414861 GLRX3O76003 335 aaKnown RBP11.84□□□□□ -0.51
RIF1-202ENST00000414861 SDSP20132 328 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 KLRK1P26718 216 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 LPIN2Q92539 896 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 NDUFB9Q9Y6M9 179 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 BBOX1O75936 387 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 STYK1Q6J9G0 422 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 BOLA2Q9H3K6 86 aa11.84□□□□□ -0.51
RIF1-202ENST00000414861 SLC5A1P13866 664 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 PHKA1P46020 1223 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 GPSM2P81274 684 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 PRPF40BQ6NWY9 871 aaKnown RBP11.83□□□□□ -0.52
RIF1-202ENST00000414861 A0A0G2JLW4 131 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 ERC2O15083 957 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 DPEP1P16444 411 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 ATP5JP18859 108 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 SCARF1Q14162 830 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 EDC3Q96F86 508 aaKnown RBP11.83□□□□□ -0.52
RIF1-202ENST00000414861 GPR101Q96P66 508 aaPredicted RBP11.83□□□□□ -0.52
RIF1-202ENST00000414861 ANKRD2Q9GZV1 360 aa11.83□□□□□ -0.52
RIF1-202ENST00000414861 MYO5AQ9Y4I1 1855 aaKnown RBP11.82□□□□□ -0.52
RIF1-202ENST00000414861 XDHP47989 1333 aa11.82□□□□□ -0.52
RIF1-202ENST00000414861 KCNA3P22001 575 aa11.82□□□□□ -0.52
RIF1-202ENST00000414861 ALDH1B1P30837 517 aa11.82□□□□□ -0.52
RIF1-202ENST00000414861 UBE4AQ14139 1066 aa11.82□□□□□ -0.52
RIF1-202ENST00000414861 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
RIF1-202ENST00000414861 ANKIB1Q9P2G1 1089 aa11.82□□□□□ -0.52
RIF1-202ENST00000414861 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms