RNA–Protein interactions for RNA: ENST00000413833.1

LINC00421-201, long intergenic non-protein coding RNA 421, humanhuman

TSL 1 (best) BASIC

Gene LINC00421, Length 1,054 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00421-201ENST00000413833 ATP5J2-PTCD1G3V325 749 aa23.46■■□□□ 1.35
LINC00421-201ENST00000413833 C6orf229H3BNL8 230 aa23.46■■□□□ 1.35
LINC00421-201ENST00000413833 ASTN2O75129 1339 aaPredicted RBP23.46■■□□□ 1.35
LINC00421-201ENST00000413833 VIL1P09327 827 aaKnown RBP23.46■■□□□ 1.35
LINC00421-201ENST00000413833 TRIM28Q13263 835 aaKnown RBP23.46■■□□□ 1.35
LINC00421-201ENST00000413833 DCPSQ96C86 337 aaKnown RBP23.46■■□□□ 1.35
LINC00421-201ENST00000413833 RNF186Q9NXI6 227 aa23.46■■□□□ 1.35
LINC00421-201ENST00000413833 SLC10A3P09131 477 aa23.45■■□□□ 1.34
LINC00421-201ENST00000413833 KIF4BQ2VIQ3 1234 aa23.45■■□□□ 1.34
LINC00421-201ENST00000413833 RBM26Q5T8P6 1007 aaKnown RBP23.45■■□□□ 1.34
LINC00421-201ENST00000413833 PODXL2Q9NZ53 605 aa23.45■■□□□ 1.34
LINC00421-201ENST00000413833 HOXB7P09629 217 aa23.44■■□□□ 1.34
LINC00421-201ENST00000413833 ZNF157P51786 506 aaPredicted RBP23.44■■□□□ 1.34
LINC00421-201ENST00000413833 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
LINC00421-201ENST00000413833 EYA3Q99504 573 aa23.44■■□□□ 1.34
LINC00421-201ENST00000413833 GGA3Q9NZ52 723 aa23.44■■□□□ 1.34
LINC00421-201ENST00000413833 ZNF646O15015 1829 aaPredicted RBP23.44■■□□□ 1.34
LINC00421-201ENST00000413833 RPS8P62241 208 aaKnown RBP23.43■■□□□ 1.34
LINC00421-201ENST00000413833 CSRNP1Q96S65 589 aa23.43■■□□□ 1.34
LINC00421-201ENST00000413833 DBF4Q9UBU7 674 aaPredicted RBP23.43■■□□□ 1.34
LINC00421-201ENST00000413833 IRS4O14654 1257 aaPredicted RBP23.42■■□□□ 1.34
LINC00421-201ENST00000413833 TRPA1O75762 1119 aa23.42■■□□□ 1.34
LINC00421-201ENST00000413833 ZNF280AP59817 542 aaPredicted RBP23.42■■□□□ 1.34
LINC00421-201ENST00000413833 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
LINC00421-201ENST00000413833 CDCA5Q96FF9 252 aa23.41■■□□□ 1.34
LINC00421-201ENST00000413833 SEC31BQ9NQW1 1179 aa23.41■■□□□ 1.34
LINC00421-201ENST00000413833 PAPPA2Q9BXP8 1791 aa23.41■■□□□ 1.34
LINC00421-201ENST00000413833 NEUROD2Q15784 382 aa23.4■■□□□ 1.34
LINC00421-201ENST00000413833 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
LINC00421-201ENST00000413833 GMLQ99445 158 aa23.4■■□□□ 1.34
LINC00421-201ENST00000413833 PCDH10Q9P2E7 1040 aa23.4■■□□□ 1.34
LINC00421-201ENST00000413833 RASAL3Q86YV0 1011 aa23.39■■□□□ 1.33
LINC00421-201ENST00000413833 SULF1Q8IWU6 871 aa23.39■■□□□ 1.33
LINC00421-201ENST00000413833 ZC3H12CQ9C0D7 883 aaKnown RBP23.39■■□□□ 1.33
LINC00421-201ENST00000413833 HYPKQ9NX55 129 aa23.39■■□□□ 1.33
LINC00421-201ENST00000413833 RALBP1Q15311 655 aa23.38■■□□□ 1.33
LINC00421-201ENST00000413833 LAS1LQ9Y4W2 734 aaKnown RBP23.38■■□□□ 1.33
LINC00421-201ENST00000413833 SOX10P56693 466 aa23.37■■□□□ 1.33
LINC00421-201ENST00000413833 ANGEL2Q5VTE6 544 aaKnown RBP23.37■■□□□ 1.33
LINC00421-201ENST00000413833 RSBN1LQ6PCB5 846 aaPredicted RBP23.37■■□□□ 1.33
LINC00421-201ENST00000413833 ZBTB38Q8NAP3 1195 aaPredicted RBP23.37■■□□□ 1.33
LINC00421-201ENST00000413833 AGBL3Q8NEM8 1001 aa23.37■■□□□ 1.33
LINC00421-201ENST00000413833 UFL1O94874 794 aa23.36■■□□□ 1.33
LINC00421-201ENST00000413833 SCARF1Q14162 830 aa23.36■■□□□ 1.33
LINC00421-201ENST00000413833 DUSP27Q5VZP5 1158 aa23.36■■□□□ 1.33
LINC00421-201ENST00000413833 RUNDC1Q96C34 613 aa23.36■■□□□ 1.33
LINC00421-201ENST00000413833 CTU1Q7Z7A3 348 aaKnown RBP23.35■■□□□ 1.33
LINC00421-201ENST00000413833 GGA1Q9UJY5 639 aa23.35■■□□□ 1.33
LINC00421-201ENST00000413833 PITPNM2Q9BZ72 1349 aa23.34■■□□□ 1.33
LINC00421-201ENST00000413833 PHAXQ9H814 394 aaKnown RBP23.34■■□□□ 1.33
LINC00421-201ENST00000413833 ZNF853P0CG23 659 aa23.33■■□□□ 1.33
LINC00421-201ENST00000413833 FKBP1BP68106 108 aa23.33■■□□□ 1.33
LINC00421-201ENST00000413833 REM2Q8IYK8 340 aaPredicted RBP23.33■■□□□ 1.33
LINC00421-201ENST00000413833 MBIPQ9NS73 344 aa23.33■■□□□ 1.33
LINC00421-201ENST00000413833 ANKIB1Q9P2G1 1089 aa23.33■■□□□ 1.33
LINC00421-201ENST00000413833 MYH3P11055 1940 aa23.33■■□□□ 1.32
LINC00421-201ENST00000413833 SPEF2Q9C093 1822 aa23.33■■□□□ 1.32
LINC00421-201ENST00000413833 PCCAP05165 728 aaPredicted RBP23.32■■□□□ 1.32
LINC00421-201ENST00000413833 MOB2Q70IA6 237 aa23.31■■□□□ 1.32
LINC00421-201ENST00000413833 RIC3Q7Z5B4 369 aa23.31■■□□□ 1.32
LINC00421-201ENST00000413833 MYOZ2Q9NPC6 264 aa23.31■■□□□ 1.32
LINC00421-201ENST00000413833 WTIPA6NIX2 430 aaPredicted RBP23.3■■□□□ 1.32
LINC00421-201ENST00000413833 PDE8AO60658 829 aa23.3■■□□□ 1.32
LINC00421-201ENST00000413833 USP17L8P0C7I0 530 aa23.3■■□□□ 1.32
LINC00421-201ENST00000413833 CCDC191Q8NCU4 936 aa23.3■■□□□ 1.32
LINC00421-201ENST00000413833 MYD88Q99836 296 aa23.3■■□□□ 1.32
LINC00421-201ENST00000413833 SCAF8Q9UPN6 1271 aaKnown RBP23.3■■□□□ 1.32
LINC00421-201ENST00000413833 XDHP47989 1333 aa23.3■■□□□ 1.32
LINC00421-201ENST00000413833 MYBBP1AQ9BQG0 1328 aaKnown RBP23.3■■□□□ 1.32
LINC00421-201ENST00000413833 CCDC152Q4G0S7 254 aa23.29■■□□□ 1.32
LINC00421-201ENST00000413833 ADAMTS8Q9UP79 889 aa23.29■■□□□ 1.32
LINC00421-201ENST00000413833 HPS5Q9UPZ3 1129 aa23.29■■□□□ 1.32
LINC00421-201ENST00000413833 G3V3G9 751 aa23.28■■□□□ 1.32
LINC00421-201ENST00000413833 GOLGA2Q08379 1002 aa23.28■■□□□ 1.32
LINC00421-201ENST00000413833 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
LINC00421-201ENST00000413833 PODNQ7Z5L7 613 aa23.28■■□□□ 1.32
LINC00421-201ENST00000413833 JARID2Q92833 1246 aaPredicted RBP23.28■■□□□ 1.32
LINC00421-201ENST00000413833 USP17L3A6NCW0 530 aa23.27■■□□□ 1.32
LINC00421-201ENST00000413833 USP17L4A6NCW7 530 aa23.27■■□□□ 1.32
LINC00421-201ENST00000413833 HSP90B1P14625 803 aaKnown RBP23.27■■□□□ 1.32
LINC00421-201ENST00000413833 USP17L1Q7RTZ2 530 aa23.27■■□□□ 1.32
LINC00421-201ENST00000413833 CCDC85AQ96PX6 553 aaPredicted RBP23.27■■□□□ 1.32
LINC00421-201ENST00000413833 HTTP42858 3142 aa23.26■■□□□ 1.31
LINC00421-201ENST00000413833 UBE2Q2LH0YL09 131 aa23.26■■□□□ 1.31
LINC00421-201ENST00000413833 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
LINC00421-201ENST00000413833 NBPF9Q3BBW0 867 aa23.26■■□□□ 1.31
LINC00421-201ENST00000413833 PRAMEF18Q5VWM3 479 aa23.26■■□□□ 1.31
LINC00421-201ENST00000413833 TM4SF4P48230 202 aa23.25■■□□□ 1.31
LINC00421-201ENST00000413833 DACT2Q5SW24 774 aa23.25■■□□□ 1.31
LINC00421-201ENST00000413833 ANKRD18AQ8IVF6 992 aa23.25■■□□□ 1.31
LINC00421-201ENST00000413833 ZNF296Q8WUU4 475 aaPredicted RBP23.25■■□□□ 1.31
LINC00421-201ENST00000413833 METTL22Q9BUU2 404 aaPredicted RBP23.25■■□□□ 1.31
LINC00421-201ENST00000413833 CWC25Q9NXE8 425 aaPredicted RBP23.25■■□□□ 1.31
LINC00421-201ENST00000413833 MED23Q9ULK4 1368 aa23.25■■□□□ 1.31
LINC00421-201ENST00000413833 TBC1D8O95759 1140 aa23.24■■□□□ 1.31
LINC00421-201ENST00000413833 NOM1Q5C9Z4 860 aaKnown RBP23.24■■□□□ 1.31
LINC00421-201ENST00000413833 PRPF38BQ5VTL8 546 aaKnown RBP23.24■■□□□ 1.31
LINC00421-201ENST00000413833 LAMB1P07942 1786 aa23.24■■□□□ 1.31
LINC00421-201ENST00000413833 PKN2Q16513 984 aaKnown RBP23.23■■□□□ 1.31
LINC00421-201ENST00000413833 MXD3Q9BW11 206 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms