RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-205ENST00000413658 SBF1O95248 1867 aa12.86□□□□□ -0.35
ZNF3-205ENST00000413658 CCDC88AQ3V6T2 1871 aa12.86□□□□□ -0.35
ZNF3-205ENST00000413658 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 BBOX1O75936 387 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
ZNF3-205ENST00000413658 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
ZNF3-205ENST00000413658 CEP85Q6P2H3 762 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 SIRT2Q8IXJ6 389 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
ZNF3-205ENST00000413658 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
ZNF3-205ENST00000413658 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
ZNF3-205ENST00000413658 ATP8B2P98198 1209 aa12.84□□□□□ -0.35
ZNF3-205ENST00000413658 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
ZNF3-205ENST00000413658 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
ZNF3-205ENST00000413658 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
ZNF3-205ENST00000413658 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
ZNF3-205ENST00000413658 CDC5LQ99459 802 aaKnown RBP12.84□□□□□ -0.35
ZNF3-205ENST00000413658 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
ZNF3-205ENST00000413658 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
ZNF3-205ENST00000413658 DUOX1Q9NRD9 1551 aa12.83□□□□□ -0.35
ZNF3-205ENST00000413658 SRGAP3O43295 1099 aa12.83□□□□□ -0.36
ZNF3-205ENST00000413658 ANKRD18AQ8IVF6 992 aa12.83□□□□□ -0.36
ZNF3-205ENST00000413658 KLHDC4Q8TBB5 520 aa12.83□□□□□ -0.36
ZNF3-205ENST00000413658 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.36
ZNF3-205ENST00000413658 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
ZNF3-205ENST00000413658 C21orf2O43822 256 aa12.82□□□□□ -0.36
ZNF3-205ENST00000413658 TMC4Q7Z404 712 aa12.82□□□□□ -0.36
ZNF3-205ENST00000413658 SP8Q8IXZ3 490 aa12.82□□□□□ -0.36
ZNF3-205ENST00000413658 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
ZNF3-205ENST00000413658 PCDHB15Q9Y5E8 787 aa12.82□□□□□ -0.36
ZNF3-205ENST00000413658 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
ZNF3-205ENST00000413658 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
ZNF3-205ENST00000413658 COPRSQ9NQ92 184 aa12.81□□□□□ -0.36
ZNF3-205ENST00000413658 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
ZNF3-205ENST00000413658 PA2G4Q9UQ80 394 aaKnown RBP12.81□□□□□ -0.36
ZNF3-205ENST00000413658 RIPOR2Q9Y4F9 1068 aa12.81□□□□□ -0.36
ZNF3-205ENST00000413658 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
ZNF3-205ENST00000413658 AAMPQ13685 434 aa12.8□□□□□ -0.36
ZNF3-205ENST00000413658 LRRC24Q50LG9 513 aa12.8□□□□□ -0.36
ZNF3-205ENST00000413658 ATG9AQ7Z3C6 839 aa12.8□□□□□ -0.36
ZNF3-205ENST00000413658 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
ZNF3-205ENST00000413658 MPHOSPH8Q99549 860 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 EYA2O00167 538 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 NFKBIEO00221 500 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 CIAO1O76071 339 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 GPSM2P81274 684 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 GPR162Q16538 588 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 VGLL2Q8N8G2 317 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
ZNF3-205ENST00000413658 RTFDC1Q9BY42 306 aaPredicted RBP12.79□□□□□ -0.36
ZNF3-205ENST00000413658 PODXL2Q9NZ53 605 aa12.79□□□□□ -0.36
ZNF3-205ENST00000413658 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
ZNF3-205ENST00000413658 CHD4Q14839 1912 aa12.78□□□□□ -0.36
ZNF3-205ENST00000413658 WTIPA6NIX2 430 aaPredicted RBP12.78□□□□□ -0.36
ZNF3-205ENST00000413658 PRELPP51888 382 aa12.78□□□□□ -0.36
ZNF3-205ENST00000413658 CHRNDQ07001 517 aa12.78□□□□□ -0.36
ZNF3-205ENST00000413658 RTKN2Q8IZC4 609 aa12.78□□□□□ -0.36
ZNF3-205ENST00000413658 ARAP2Q8WZ64 1704 aa12.78□□□□□ -0.36
ZNF3-205ENST00000413658 SIL1Q9H173 461 aa12.78□□□□□ -0.36
ZNF3-205ENST00000413658 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
ZNF3-205ENST00000413658 LTBP3Q9NS15 1303 aa12.77□□□□□ -0.37
ZNF3-205ENST00000413658 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
ZNF3-205ENST00000413658 HELBQ8NG08 1087 aaPredicted RBP12.77□□□□□ -0.37
ZNF3-205ENST00000413658 PSMD1Q99460 953 aa12.77□□□□□ -0.37
ZNF3-205ENST00000413658 POLLQ9UGP5 575 aa12.77□□□□□ -0.37
ZNF3-205ENST00000413658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.77□□□□□ -0.37
ZNF3-205ENST00000413658 COL4A5P29400 1685 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 XDHP47989 1333 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 TAF5LO75529 589 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
ZNF3-205ENST00000413658 RASSF7Q02833 373 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 ARHGAP27Q6ZUM4 889 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 MPNDQ8N594 471 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 TBC1D16Q8TBP0 767 aa12.76□□□□□ -0.37
ZNF3-205ENST00000413658 NSFL1CQ9UNZ2 370 aaKnown RBP12.76□□□□□ -0.37
ZNF3-205ENST00000413658 SNAP23O00161 211 aa12.75□□□□□ -0.37
ZNF3-205ENST00000413658 HMMRO75330 724 aa12.75□□□□□ -0.37
ZNF3-205ENST00000413658 SASH1O94885 1247 aa12.75□□□□□ -0.37
ZNF3-205ENST00000413658 IL15P40933 162 aaPredicted RBP12.75□□□□□ -0.37
ZNF3-205ENST00000413658 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
ZNF3-205ENST00000413658 DPP8Q6V1X1 898 aaPredicted RBP12.75□□□□□ -0.37
ZNF3-205ENST00000413658 ANKRD2Q9GZV1 360 aa12.75□□□□□ -0.37
ZNF3-205ENST00000413658 ANKIB1Q9P2G1 1089 aa12.75□□□□□ -0.37
ZNF3-205ENST00000413658 ZNF646O15015 1829 aaPredicted RBP12.75□□□□□ -0.37
ZNF3-205ENST00000413658 PSME4Q14997 1843 aa12.75□□□□□ -0.37
ZNF3-205ENST00000413658 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
ZNF3-205ENST00000413658 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
ZNF3-205ENST00000413658 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
ZNF3-205ENST00000413658 PDE8BO95263 885 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms