RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NYAP1Q6ZVC0 841 aa20.69■□□□□ 0.9
SDCBP-202ENST00000413219 CCAR1Q8IX12 1150 aaKnown RBP20.69■□□□□ 0.9
SDCBP-202ENST00000413219 LRRC59Q96AG4 307 aaKnown RBP20.69■□□□□ 0.9
SDCBP-202ENST00000413219 ANO10Q9NW15 660 aa20.69■□□□□ 0.9
SDCBP-202ENST00000413219 ADAMTS7Q9UKP4 1686 aa20.69■□□□□ 0.9
SDCBP-202ENST00000413219 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
SDCBP-202ENST00000413219 ZNF609O15014 1411 aa20.68■□□□□ 0.9
SDCBP-202ENST00000413219 RIC3Q7Z5B4 369 aa20.68■□□□□ 0.9
SDCBP-202ENST00000413219 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
SDCBP-202ENST00000413219 CEBPAP49715 358 aaPredicted RBP20.68■□□□□ 0.9
SDCBP-202ENST00000413219 SCRN1Q12765 414 aa20.68■□□□□ 0.9
SDCBP-202ENST00000413219 GCKRQ14397 625 aa20.68■□□□□ 0.9
SDCBP-202ENST00000413219 TICAM2Q86XR7 235 aa20.68■□□□□ 0.9
SDCBP-202ENST00000413219 NSUN7Q8NE18 718 aaKnown RBP20.68■□□□□ 0.9
SDCBP-202ENST00000413219 ZNF396Q96N95 335 aaPredicted RBP20.68■□□□□ 0.9
SDCBP-202ENST00000413219 DBNLQ9UJU6 430 aaKnown RBP20.68■□□□□ 0.9
SDCBP-202ENST00000413219 MYH15Q9Y2K3 1946 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 BECN2A8MW95 431 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 CYP21A2P08686 494 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 MCMDC2Q4G0Z9 681 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 TNNI3KQ59H18 835 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 DDX11Q96FC9 970 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 MORC2Q9Y6X9 1032 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-202ENST00000413219 FPGT-TNNI3KV9GXZ4 949 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 KIF13AQ9H1H9 1805 aa20.67■□□□□ 0.9
SDCBP-202ENST00000413219 KIF2AO00139 706 aaPredicted RBP20.66■□□□□ 0.9
SDCBP-202ENST00000413219 KINO60870 393 aaKnown RBP20.66■□□□□ 0.9
SDCBP-202ENST00000413219 FAM160A1Q05DH4 1040 aa20.66■□□□□ 0.9
SDCBP-202ENST00000413219 SNW1Q13573 536 aaKnown RBP20.66■□□□□ 0.9
SDCBP-202ENST00000413219 PTPN14Q15678 1187 aa20.66■□□□□ 0.9
SDCBP-202ENST00000413219 ENGASEQ8NFI3 743 aa20.66■□□□□ 0.9
SDCBP-202ENST00000413219 CHMP4CQ96CF2 233 aa20.66■□□□□ 0.9
SDCBP-202ENST00000413219 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
SDCBP-202ENST00000413219 CAMTA1Q9Y6Y1 1673 aa20.66■□□□□ 0.9
SDCBP-202ENST00000413219 SKILP12757 684 aa20.66■□□□□ 0.9
SDCBP-202ENST00000413219 AIMP1Q12904 312 aaKnown RBP20.66■□□□□ 0.9
SDCBP-202ENST00000413219 KLHDC4Q8TBB5 520 aa20.66■□□□□ 0.9
SDCBP-202ENST00000413219 GSDMDP57764 484 aa20.65■□□□□ 0.9
SDCBP-202ENST00000413219 CCZ1BP86790 482 aa20.65■□□□□ 0.9
SDCBP-202ENST00000413219 CCZ1P86791 482 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-202ENST00000413219 DHX32Q7L7V1 743 aaKnown RBP20.65■□□□□ 0.9
SDCBP-202ENST00000413219 DHX40Q8IX18 779 aaKnown RBP20.65■□□□□ 0.9
SDCBP-202ENST00000413219 ZNF397Q8NF99 534 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-202ENST00000413219 HAUS7Q99871 368 aa20.65■□□□□ 0.9
SDCBP-202ENST00000413219 METTL22Q9BUU2 404 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-202ENST00000413219 AGXT2Q9BYV1 514 aa20.65■□□□□ 0.9
SDCBP-202ENST00000413219 GOLPH3LQ9H4A5 285 aa20.65■□□□□ 0.9
SDCBP-202ENST00000413219 SH3TC1Q8TE82 1336 aa20.65■□□□□ 0.9
SDCBP-202ENST00000413219 RFX5P48382 616 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-202ENST00000413219 CEP57L1Q8IYX8 460 aa20.65■□□□□ 0.9
SDCBP-202ENST00000413219 NAT10Q9H0A0 1025 aaKnown RBP20.65■□□□□ 0.9
SDCBP-202ENST00000413219 CCDC69A6NI79 296 aa20.64■□□□□ 0.89
SDCBP-202ENST00000413219 EPHA10Q5JZY3 1008 aa20.64■□□□□ 0.89
SDCBP-202ENST00000413219 KIF18AQ8NI77 898 aa20.64■□□□□ 0.89
SDCBP-202ENST00000413219 FGD1P98174 961 aa20.63■□□□□ 0.89
SDCBP-202ENST00000413219 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
SDCBP-202ENST00000413219 ERO1AQ96HE7 468 aa20.63■□□□□ 0.89
SDCBP-202ENST00000413219 IMPACTQ9P2X3 320 aa20.63■□□□□ 0.89
SDCBP-202ENST00000413219 PTPDC1A2A3K4 754 aa20.63■□□□□ 0.89
SDCBP-202ENST00000413219 DHX8Q14562 1220 aaKnown RBP20.63■□□□□ 0.89
SDCBP-202ENST00000413219 RABL6Q3YEC7 729 aaPredicted RBP20.63■□□□□ 0.89
SDCBP-202ENST00000413219 SLFNL1Q499Z3 407 aa20.63■□□□□ 0.89
SDCBP-202ENST00000413219 USP28Q96RU2 1077 aa20.63■□□□□ 0.89
SDCBP-202ENST00000413219 SALL1Q9NSC2 1324 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 USP27XA6NNY8 438 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 CTDNEP1O95476 244 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 TFCP2Q12800 502 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 CCAR2Q8N163 923 aaKnown RBP20.62■□□□□ 0.89
SDCBP-202ENST00000413219 ZNF592Q92610 1267 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 OSBPL5Q9H0X9 879 aaPredicted RBP20.62■□□□□ 0.89
SDCBP-202ENST00000413219 PALLDQ8WX93 1383 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 SLIT3O75094 1523 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 EXOSC10Q01780 885 aaKnown RBP20.62■□□□□ 0.89
SDCBP-202ENST00000413219 CEBPZQ03701 1054 aaKnown RBP20.62■□□□□ 0.89
SDCBP-202ENST00000413219 ARID5BQ14865 1188 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 CCDC129Q6ZRS4 1044 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 STOX1Q6ZVD7 989 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 KBTBD3Q8NAB2 608 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 DSCC1Q9BVC3 393 aa20.62■□□□□ 0.89
SDCBP-202ENST00000413219 NAA30Q147X3 362 aaPredicted RBP20.61■□□□□ 0.89
SDCBP-202ENST00000413219 FSIP1Q8NA03 581 aa20.61■□□□□ 0.89
SDCBP-202ENST00000413219 MYD88Q99836 296 aa20.61■□□□□ 0.89
SDCBP-202ENST00000413219 HELLSQ9NRZ9 838 aa20.61■□□□□ 0.89
SDCBP-202ENST00000413219 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
SDCBP-202ENST00000413219 PSME1Q06323 249 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 BPIFA3Q9BQP9 254 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 ZNF215Q9UL58 517 aaPredicted RBP20.6■□□□□ 0.89
SDCBP-202ENST00000413219 A0A1W2PQ27 194 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 A0A1W2PQ64 194 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 A0A1W2PQD8 194 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 TAF3Q5VWG9 929 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 ANKRD24Q8TF21 1146 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 XAGE3Q8WTP9 111 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 ZNF274Q96GC6 653 aaPredicted RBP20.6■□□□□ 0.89
SDCBP-202ENST00000413219 SEC62Q99442 399 aaKnown RBP20.6■□□□□ 0.89
SDCBP-202ENST00000413219 DNAJC2Q99543 621 aaKnown RBP20.6■□□□□ 0.89
SDCBP-202ENST00000413219 SETD1BQ9UPS6 1966 aaKnown RBP20.6■□□□□ 0.89
SDCBP-202ENST00000413219 ABCC6O95255 1503 aa20.6■□□□□ 0.89
SDCBP-202ENST00000413219 KCNJ6P48051 423 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms