RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 ATP5J2-PTCD1G3V325 749 aa24.49■■□□□ 1.51
TNRC18-204ENST00000413081 NEUROD2Q15784 382 aa24.49■■□□□ 1.51
TNRC18-204ENST00000413081 RTL5Q5HYW3 569 aaPredicted RBP24.49■■□□□ 1.51
TNRC18-204ENST00000413081 ISCA1Q9BUE6 129 aa24.49■■□□□ 1.51
TNRC18-204ENST00000413081 GGA3Q9NZ52 723 aa24.49■■□□□ 1.51
TNRC18-204ENST00000413081 RTL9Q8NET4 1388 aa24.49■■□□□ 1.51
TNRC18-204ENST00000413081 TNRC18O15417 2968 aaPredicted RBP24.48■■□□□ 1.51
TNRC18-204ENST00000413081 TRPA1O75762 1119 aa24.48■■□□□ 1.51
TNRC18-204ENST00000413081 ZC3H12CQ9C0D7 883 aaKnown RBP24.48■■□□□ 1.51
TNRC18-204ENST00000413081 KCNQ5Q9NR82 932 aa24.48■■□□□ 1.51
TNRC18-204ENST00000413081 CHL1O00533 1208 aa24.47■■□□□ 1.51
TNRC18-204ENST00000413081 TBC1D16Q8TBP0 767 aa24.47■■□□□ 1.51
TNRC18-204ENST00000413081 RNF186Q9NXI6 227 aa24.47■■□□□ 1.51
TNRC18-204ENST00000413081 DBF4Q9UBU7 674 aaPredicted RBP24.47■■□□□ 1.51
TNRC18-204ENST00000413081 IRS4O14654 1257 aaPredicted RBP24.46■■□□□ 1.51
TNRC18-204ENST00000413081 RPS8P62241 208 aaKnown RBP24.46■■□□□ 1.51
TNRC18-204ENST00000413081 COL4A1P02462 1669 aa24.46■■□□□ 1.51
TNRC18-204ENST00000413081 SLC10A3P09131 477 aa24.45■■□□□ 1.5
TNRC18-204ENST00000413081 HOXB7P09629 217 aa24.45■■□□□ 1.5
TNRC18-204ENST00000413081 PCDH10Q9P2E7 1040 aa24.45■■□□□ 1.5
TNRC18-204ENST00000413081 SCN9AQ15858 1988 aa24.44■■□□□ 1.5
TNRC18-204ENST00000413081 UFL1O94874 794 aa24.44■■□□□ 1.5
TNRC18-204ENST00000413081 VIL1P09327 827 aaKnown RBP24.44■■□□□ 1.5
TNRC18-204ENST00000413081 SOX10P56693 466 aa24.44■■□□□ 1.5
TNRC18-204ENST00000413081 CCDC146Q8IYE0 955 aa24.44■■□□□ 1.5
TNRC18-204ENST00000413081 CDCA5Q96FF9 252 aa24.44■■□□□ 1.5
TNRC18-204ENST00000413081 HYPKQ9NX55 129 aa24.44■■□□□ 1.5
TNRC18-204ENST00000413081 ANKIB1Q9P2G1 1089 aa24.44■■□□□ 1.5
TNRC18-204ENST00000413081 HSP90B1P14625 803 aaKnown RBP24.42■■□□□ 1.5
TNRC18-204ENST00000413081 RALBP1Q15311 655 aa24.42■■□□□ 1.5
TNRC18-204ENST00000413081 CSRNP1Q96S65 589 aa24.42■■□□□ 1.5
TNRC18-204ENST00000413081 PODXL2Q9NZ53 605 aa24.42■■□□□ 1.5
TNRC18-204ENST00000413081 GGA1Q9UJY5 639 aa24.42■■□□□ 1.5
TNRC18-204ENST00000413081 ASTN2O75129 1339 aaPredicted RBP24.41■■□□□ 1.5
TNRC18-204ENST00000413081 REM2Q8IYK8 340 aaPredicted RBP24.41■■□□□ 1.5
TNRC18-204ENST00000413081 PDE4DIPQ5VU43 2346 aa24.4■■□□□ 1.5
TNRC18-204ENST00000413081 TRIM28Q13263 835 aaKnown RBP24.4■■□□□ 1.5
TNRC18-204ENST00000413081 ANGEL2Q5VTE6 544 aaKnown RBP24.4■■□□□ 1.5
TNRC18-204ENST00000413081 RIC3Q7Z5B4 369 aa24.4■■□□□ 1.5
TNRC18-204ENST00000413081 CTU1Q7Z7A3 348 aaKnown RBP24.4■■□□□ 1.5
TNRC18-204ENST00000413081 AGBL3Q8NEM8 1001 aa24.4■■□□□ 1.5
TNRC18-204ENST00000413081 GOLGA2Q08379 1002 aa24.39■■□□□ 1.49
TNRC18-204ENST00000413081 SCARF1Q14162 830 aa24.39■■□□□ 1.49
TNRC18-204ENST00000413081 RSBN1LQ6PCB5 846 aaPredicted RBP24.39■■□□□ 1.49
TNRC18-204ENST00000413081 RASAL3Q86YV0 1011 aa24.39■■□□□ 1.49
TNRC18-204ENST00000413081 ZBTB38Q8NAP3 1195 aaPredicted RBP24.39■■□□□ 1.49
TNRC18-204ENST00000413081 SEC31BQ9NQW1 1179 aa24.39■■□□□ 1.49
TNRC18-204ENST00000413081 TRIM35Q9UPQ4 493 aa24.39■■□□□ 1.49
TNRC18-204ENST00000413081 PAPPA2Q9BXP8 1791 aa24.39■■□□□ 1.49
TNRC18-204ENST00000413081 PSME4Q14997 1843 aa24.38■■□□□ 1.49
TNRC18-204ENST00000413081 ZNF280AP59817 542 aaPredicted RBP24.38■■□□□ 1.49
TNRC18-204ENST00000413081 FKBP1BP68106 108 aa24.38■■□□□ 1.49
TNRC18-204ENST00000413081 RUNDC1Q96C34 613 aa24.38■■□□□ 1.49
TNRC18-204ENST00000413081 ZNF609O15014 1411 aa24.37■■□□□ 1.49
TNRC18-204ENST00000413081 CCDC152Q4G0S7 254 aa24.37■■□□□ 1.49
TNRC18-204ENST00000413081 DUSP27Q5VZP5 1158 aa24.37■■□□□ 1.49
TNRC18-204ENST00000413081 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
TNRC18-204ENST00000413081 WDR43Q15061 677 aaKnown RBP eCLIP24.36■■□□□ 1.49
TNRC18-204ENST00000413081 USP17L8P0C7I0 530 aa24.35■■□□□ 1.49
TNRC18-204ENST00000413081 MYOZ2Q9NPC6 264 aa24.35■■□□□ 1.49
TNRC18-204ENST00000413081 PITPNM2Q9BZ72 1349 aa24.35■■□□□ 1.49
TNRC18-204ENST00000413081 MYD88Q99836 296 aa24.34■■□□□ 1.49
TNRC18-204ENST00000413081 XDHP47989 1333 aa24.34■■□□□ 1.49
TNRC18-204ENST00000413081 PDE8AO60658 829 aa24.33■■□□□ 1.49
TNRC18-204ENST00000413081 CCDC85AQ96PX6 553 aaPredicted RBP24.33■■□□□ 1.49
TNRC18-204ENST00000413081 HDAC9Q9UKV0 1011 aa24.33■■□□□ 1.49
TNRC18-204ENST00000413081 USP17L3A6NCW0 530 aa24.32■■□□□ 1.48
TNRC18-204ENST00000413081 USP17L4A6NCW7 530 aa24.32■■□□□ 1.48
TNRC18-204ENST00000413081 USP17L1Q7RTZ2 530 aa24.32■■□□□ 1.48
TNRC18-204ENST00000413081 ANKRD18AQ8IVF6 992 aa24.32■■□□□ 1.48
TNRC18-204ENST00000413081 CCDC191Q8NCU4 936 aa24.32■■□□□ 1.48
TNRC18-204ENST00000413081 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
TNRC18-204ENST00000413081 PCCAP05165 728 aaPredicted RBP24.31■■□□□ 1.48
TNRC18-204ENST00000413081 PODNQ7Z5L7 613 aa24.31■■□□□ 1.48
TNRC18-204ENST00000413081 PHAXQ9H814 394 aaKnown RBP24.31■■□□□ 1.48
TNRC18-204ENST00000413081 MBIPQ9NS73 344 aa24.31■■□□□ 1.48
TNRC18-204ENST00000413081 HPS5Q9UPZ3 1129 aa24.31■■□□□ 1.48
TNRC18-204ENST00000413081 ATP2B4P23634 1241 aa24.3■■□□□ 1.48
TNRC18-204ENST00000413081 TTLL12Q14166 644 aaPredicted RBP24.3■■□□□ 1.48
TNRC18-204ENST00000413081 PKN2Q16513 984 aaKnown RBP24.3■■□□□ 1.48
TNRC18-204ENST00000413081 GMLQ99445 158 aa24.3■■□□□ 1.48
TNRC18-204ENST00000413081 CWC25Q9NXE8 425 aaPredicted RBP24.3■■□□□ 1.48
TNRC18-204ENST00000413081 PRPF38BQ5VTL8 546 aaKnown RBP24.29■■□□□ 1.48
TNRC18-204ENST00000413081 MOB2Q70IA6 237 aa24.29■■□□□ 1.48
TNRC18-204ENST00000413081 SCAF8Q9UPN6 1271 aaKnown RBP24.29■■□□□ 1.48
TNRC18-204ENST00000413081 UBE2Q2LH0YL09 131 aa24.28■■□□□ 1.48
TNRC18-204ENST00000413081 TBC1D8O95759 1140 aa24.28■■□□□ 1.48
TNRC18-204ENST00000413081 NF2P35240 595 aa24.28■■□□□ 1.48
TNRC18-204ENST00000413081 JARID2Q92833 1246 aaPredicted RBP24.28■■□□□ 1.48
TNRC18-204ENST00000413081 OGFOD1Q8N543 542 aa24.27■■□□□ 1.48
TNRC18-204ENST00000413081 ZNF296Q8WUU4 475 aaPredicted RBP24.27■■□□□ 1.48
TNRC18-204ENST00000413081 FBXW7Q969H0 707 aa24.27■■□□□ 1.48
TNRC18-204ENST00000413081 CDC5LQ99459 802 aaKnown RBP24.27■■□□□ 1.48
TNRC18-204ENST00000413081 DDX58O95786 925 aaKnown RBP24.26■■□□□ 1.47
TNRC18-204ENST00000413081 PRAMEF18Q5VWM3 479 aa24.26■■□□□ 1.47
TNRC18-204ENST00000413081 SPEF2Q9C093 1822 aa24.26■■□□□ 1.47
TNRC18-204ENST00000413081 ELL2O00472 640 aaPredicted RBP24.25■■□□□ 1.47
TNRC18-204ENST00000413081 NBPF9Q3BBW0 867 aa24.25■■□□□ 1.47
TNRC18-204ENST00000413081 ADAMTS8Q9UP79 889 aa24.25■■□□□ 1.47
TNRC18-204ENST00000413081 MED23Q9ULK4 1368 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms