RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 ISCA1Q9BUE6 129 aa16.89■□□□□ 0.29
PTPRN-203ENST00000412847 POLLQ9UGP5 575 aa16.89■□□□□ 0.29
PTPRN-203ENST00000412847 SLC10A3P09131 477 aa16.88■□□□□ 0.29
PTPRN-203ENST00000412847 DOK7Q18PE1 504 aa16.88■□□□□ 0.29
PTPRN-203ENST00000412847 FAM89AQ96GI7 184 aa16.88■□□□□ 0.29
PTPRN-203ENST00000412847 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
PTPRN-203ENST00000412847 PCDH10Q9P2E7 1040 aa16.88■□□□□ 0.29
PTPRN-203ENST00000412847 ZNF609O15014 1411 aa16.87■□□□□ 0.29
PTPRN-203ENST00000412847 ECM29Q5VYK3 1845 aa16.87■□□□□ 0.29
PTPRN-203ENST00000412847 HDGFL1Q5TGJ6 251 aa16.87■□□□□ 0.29
PTPRN-203ENST00000412847 SULF1Q8IWU6 871 aa16.87■□□□□ 0.29
PTPRN-203ENST00000412847 RNF186Q9NXI6 227 aa16.87■□□□□ 0.29
PTPRN-203ENST00000412847 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 TRPA1O75762 1119 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 SOX10P56693 466 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 ANKRD13DQ6ZTN6 518 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 TBC1D16Q8TBP0 767 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 KCNQ5Q9NR82 932 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 LAMB1P07942 1786 aa16.86■□□□□ 0.29
PTPRN-203ENST00000412847 CHL1O00533 1208 aa16.85■□□□□ 0.29
PTPRN-203ENST00000412847 RTL5Q5HYW3 569 aaPredicted RBP16.85■□□□□ 0.29
PTPRN-203ENST00000412847 ZC3H12CQ9C0D7 883 aaKnown RBP16.85■□□□□ 0.29
PTPRN-203ENST00000412847 DBF4Q9UBU7 674 aaPredicted RBP16.85■□□□□ 0.29
PTPRN-203ENST00000412847 LAS1LQ9Y4W2 734 aaKnown RBP16.85■□□□□ 0.29
PTPRN-203ENST00000412847 G3V3G9 751 aa16.84■□□□□ 0.29
PTPRN-203ENST00000412847 IRS4O14654 1257 aaPredicted RBP16.84■□□□□ 0.29
PTPRN-203ENST00000412847 VIL1P09327 827 aaKnown RBP16.84■□□□□ 0.29
PTPRN-203ENST00000412847 HOXB7P09629 217 aa16.84■□□□□ 0.29
PTPRN-203ENST00000412847 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
PTPRN-203ENST00000412847 ASTN2O75129 1339 aaPredicted RBP16.84■□□□□ 0.29
PTPRN-203ENST00000412847 UFL1O94874 794 aa16.83■□□□□ 0.28
PTPRN-203ENST00000412847 RPS8P62241 208 aaKnown RBP16.83■□□□□ 0.28
PTPRN-203ENST00000412847 NEUROD2Q15784 382 aa16.83■□□□□ 0.28
PTPRN-203ENST00000412847 CTU1Q7Z7A3 348 aaKnown RBP16.83■□□□□ 0.28
PTPRN-203ENST00000412847 RASAL3Q86YV0 1011 aa16.83■□□□□ 0.28
PTPRN-203ENST00000412847 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
PTPRN-203ENST00000412847 CSRNP1Q96S65 589 aa16.83■□□□□ 0.28
PTPRN-203ENST00000412847 PODXL2Q9NZ53 605 aa16.83■□□□□ 0.28
PTPRN-203ENST00000412847 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
PTPRN-203ENST00000412847 HYPKQ9NX55 129 aa16.82■□□□□ 0.28
PTPRN-203ENST00000412847 A0A1B0GUL6 1792 aa16.82■□□□□ 0.28
PTPRN-203ENST00000412847 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
PTPRN-203ENST00000412847 TRIM28Q13263 835 aaKnown RBP16.81■□□□□ 0.28
PTPRN-203ENST00000412847 ANGEL2Q5VTE6 544 aaKnown RBP16.81■□□□□ 0.28
PTPRN-203ENST00000412847 ANKIB1Q9P2G1 1089 aa16.81■□□□□ 0.28
PTPRN-203ENST00000412847 GGA1Q9UJY5 639 aa16.81■□□□□ 0.28
PTPRN-203ENST00000412847 FKBP1BP68106 108 aa16.8■□□□□ 0.28
PTPRN-203ENST00000412847 RSBN1LQ6PCB5 846 aaPredicted RBP16.8■□□□□ 0.28
PTPRN-203ENST00000412847 AGBL3Q8NEM8 1001 aa16.8■□□□□ 0.28
PTPRN-203ENST00000412847 SEC31BQ9NQW1 1179 aa16.8■□□□□ 0.28
PTPRN-203ENST00000412847 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
PTPRN-203ENST00000412847 RBBP6Q7Z6E9 1792 aaKnown RBP16.79■□□□□ 0.28
PTPRN-203ENST00000412847 PITPNM2Q9BZ72 1349 aa16.79■□□□□ 0.28
PTPRN-203ENST00000412847 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
PTPRN-203ENST00000412847 GOLGA2Q08379 1002 aa16.79■□□□□ 0.28
PTPRN-203ENST00000412847 SCARF1Q14162 830 aa16.79■□□□□ 0.28
PTPRN-203ENST00000412847 RALBP1Q15311 655 aa16.79■□□□□ 0.28
PTPRN-203ENST00000412847 RIC3Q7Z5B4 369 aa16.79■□□□□ 0.28
PTPRN-203ENST00000412847 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
PTPRN-203ENST00000412847 CCDC152Q4G0S7 254 aa16.78■□□□□ 0.28
PTPRN-203ENST00000412847 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
PTPRN-203ENST00000412847 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
PTPRN-203ENST00000412847 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
PTPRN-203ENST00000412847 XDHP47989 1333 aa16.77■□□□□ 0.28
PTPRN-203ENST00000412847 USP17L8P0C7I0 530 aa16.77■□□□□ 0.28
PTPRN-203ENST00000412847 PRPF38BQ5VTL8 546 aaKnown RBP16.77■□□□□ 0.28
PTPRN-203ENST00000412847 PDE8AO60658 829 aa16.76■□□□□ 0.27
PTPRN-203ENST00000412847 GMLQ99445 158 aa16.76■□□□□ 0.27
PTPRN-203ENST00000412847 MYD88Q99836 296 aa16.76■□□□□ 0.27
PTPRN-203ENST00000412847 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
PTPRN-203ENST00000412847 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
PTPRN-203ENST00000412847 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
PTPRN-203ENST00000412847 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
PTPRN-203ENST00000412847 WDR43Q15061 677 aaKnown RBP eCLIP16.75■□□□□ 0.27
PTPRN-203ENST00000412847 PKN2Q16513 984 aaKnown RBP16.75■□□□□ 0.27
PTPRN-203ENST00000412847 MOB2Q70IA6 237 aa16.75■□□□□ 0.27
PTPRN-203ENST00000412847 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
PTPRN-203ENST00000412847 HDAC9Q9UKV0 1011 aa16.75■□□□□ 0.27
PTPRN-203ENST00000412847 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 ATP2B4P23634 1241 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 ANKRD18AQ8IVF6 992 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 CCDC191Q8NCU4 936 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 PHAXQ9H814 394 aaKnown RBP16.74■□□□□ 0.27
PTPRN-203ENST00000412847 MBIPQ9NS73 344 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 SCAF8Q9UPN6 1271 aaKnown RBP16.74■□□□□ 0.27
PTPRN-203ENST00000412847 MED23Q9ULK4 1368 aa16.74■□□□□ 0.27
PTPRN-203ENST00000412847 UBE2Q2LH0YL09 131 aa16.73■□□□□ 0.27
PTPRN-203ENST00000412847 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
PTPRN-203ENST00000412847 ZNF296Q8WUU4 475 aaPredicted RBP16.73■□□□□ 0.27
PTPRN-203ENST00000412847 CWC25Q9NXE8 425 aaPredicted RBP16.73■□□□□ 0.27
PTPRN-203ENST00000412847 OTOFQ9HC10 1997 aa16.73■□□□□ 0.27
PTPRN-203ENST00000412847 TBC1D8O95759 1140 aa16.72■□□□□ 0.27
PTPRN-203ENST00000412847 TTLL12Q14166 644 aaPredicted RBP16.72■□□□□ 0.27
PTPRN-203ENST00000412847 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
PTPRN-203ENST00000412847 NF2P35240 595 aa16.71■□□□□ 0.27
PTPRN-203ENST00000412847 NBPF9Q3BBW0 867 aa16.71■□□□□ 0.27
PTPRN-203ENST00000412847 PRAMEF18Q5VWM3 479 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms