RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RGPD4Q7Z3J3 1758 aa15.2■□□□□ 0.02
CHMP3-204ENST00000409727 PNPLA7Q6ZV29 1317 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 SPEF2Q9C093 1822 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 COL4A1P02462 1669 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 SERPINB2P05120 415 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 BAG6P46379 1132 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 DDR1Q08345 913 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 SF3B3Q15393 1217 aaKnown RBP15.19■□□□□ 0.02
CHMP3-204ENST00000409727 MSL1Q68DK7 614 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 CNTROBQ8N137 903 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 CDC5LQ99459 802 aaKnown RBP15.19■□□□□ 0.02
CHMP3-204ENST00000409727 AKAP2Q9Y2D5 859 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 NDUFB9Q9Y6M9 179 aa15.19■□□□□ 0.02
CHMP3-204ENST00000409727 TM4SF1P30408 202 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 ADORA1P30542 326 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 GPR108Q9NPR9 543 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 RTL9Q8NET4 1388 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 CASZ1Q86V15 1759 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 TAF5LO75529 589 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 ATP2B3Q16720 1220 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 GORABQ5T7V8 394 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 ANKRD18AQ8IVF6 992 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 STK32BQ9NY57 414 aa15.18■□□□□ 0.02
CHMP3-204ENST00000409727 TAF1P21675 1872 aa15.17■□□□□ 0.02
CHMP3-204ENST00000409727 TNRC6CQ9HCJ0 1690 aaKnown RBP15.17■□□□□ 0.02
CHMP3-204ENST00000409727 POLRMTO00411 1230 aaKnown RBP15.17■□□□□ 0.02
CHMP3-204ENST00000409727 ST5P78524 1137 aa15.17■□□□□ 0.02
CHMP3-204ENST00000409727 SLC15A2Q16348 729 aa15.17■□□□□ 0.02
CHMP3-204ENST00000409727 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
CHMP3-204ENST00000409727 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
CHMP3-204ENST00000409727 XAGE2Q96GT9 111 aa15.17■□□□□ 0.02
CHMP3-204ENST00000409727 DNAJC2Q99543 621 aaKnown RBP15.17■□□□□ 0.02
CHMP3-204ENST00000409727 LRP5O75197 1615 aa15.17■□□□□ 0.02
CHMP3-204ENST00000409727 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
CHMP3-204ENST00000409727 PDE8BO95263 885 aa15.16■□□□□ 0.02
CHMP3-204ENST00000409727 ATP5JP18859 108 aa15.16■□□□□ 0.02
CHMP3-204ENST00000409727 VGLL2Q8N8G2 317 aa15.16■□□□□ 0.02
CHMP3-204ENST00000409727 EDC3Q96F86 508 aaKnown RBP15.16■□□□□ 0.02
CHMP3-204ENST00000409727 SNAP23O00161 211 aa15.16■□□□□ 0.02
CHMP3-204ENST00000409727 CHMLP26374 656 aa15.16■□□□□ 0.02
CHMP3-204ENST00000409727 NLGN1Q8N2Q7 840 aa15.16■□□□□ 0.02
CHMP3-204ENST00000409727 C22orf23Q9BZE7 217 aa15.16■□□□□ 0.02
CHMP3-204ENST00000409727 AK9Q5TCS8 1911 aa15.15■□□□□ 0.02
CHMP3-204ENST00000409727 CHRNDQ07001 517 aa15.15■□□□□ 0.02
CHMP3-204ENST00000409727 DDX46Q7L014 1031 aaKnown RBP15.15■□□□□ 0.02
CHMP3-204ENST00000409727 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
CHMP3-204ENST00000409727 PUM3Q15397 648 aaKnown RBP15.14■□□□□ 0.01
CHMP3-204ENST00000409727 CCDC158Q5M9N0 1113 aa15.14■□□□□ 0.01
CHMP3-204ENST00000409727 TTC39AQ5SRH9 613 aa15.14■□□□□ 0.01
CHMP3-204ENST00000409727 TBC1D32Q96NH3 1257 aa15.14■□□□□ 0.01
CHMP3-204ENST00000409727 MMP10P09238 476 aa15.14■□□□□ 0.01
CHMP3-204ENST00000409727 FSD1Q9BTV5 496 aa15.14■□□□□ 0.01
CHMP3-204ENST00000409727 IFIT1P09914 478 aaKnown RBP15.13■□□□□ 0.01
CHMP3-204ENST00000409727 RPS8P62241 208 aaKnown RBP15.13■□□□□ 0.01
CHMP3-204ENST00000409727 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
CHMP3-204ENST00000409727 ESYT1Q9BSJ8 1104 aa15.13■□□□□ 0.01
CHMP3-204ENST00000409727 BSDC1Q9NW68 430 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-204ENST00000409727 CWC27Q6UX04 472 aaKnown RBP15.12■□□□□ 0.01
CHMP3-204ENST00000409727 LPIN2Q92539 896 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 HAUS7Q99871 368 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 SNRKQ9NRH2 765 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 WTIPA6NIX2 430 aaPredicted RBP15.12■□□□□ 0.01
CHMP3-204ENST00000409727 GOLIM4O00461 696 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 SLC5A1P13866 664 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHMP3-204ENST00000409727 PDGFDQ9GZP0 370 aaPredicted RBP15.12■□□□□ 0.01
CHMP3-204ENST00000409727 IL25Q9H293 177 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 MINPP1Q9UNW1 487 aa15.12■□□□□ 0.01
CHMP3-204ENST00000409727 FGFR2P21802 821 aa15.11■□□□□ 0.01
CHMP3-204ENST00000409727 SCARF1Q14162 830 aa15.11■□□□□ 0.01
CHMP3-204ENST00000409727 SLC51AQ86UW1 340 aa15.11■□□□□ 0.01
CHMP3-204ENST00000409727 REC8O95072 547 aa15.1■□□□□ 0.01
CHMP3-204ENST00000409727 ANO2Q9NQ90 1003 aa15.1■□□□□ 0.01
CHMP3-204ENST00000409727 PAG1Q9NWQ8 432 aa15.1■□□□□ 0.01
CHMP3-204ENST00000409727 PHKA1P46020 1223 aa15.1■□□□□ 0.01
CHMP3-204ENST00000409727 GRAPQ13588 217 aa15.1■□□□□ 0.01
CHMP3-204ENST00000409727 CCDC102BQ68D86 513 aa15.1■□□□□ 0.01
CHMP3-204ENST00000409727 PI16Q6UXB8 463 aa15.1■□□□□ 0.01
CHMP3-204ENST00000409727 GRAPLQ8TC17 118 aaPredicted RBP15.1■□□□□ 0.01
CHMP3-204ENST00000409727 CHGBP05060 677 aa15.09■□□□□ 0.01
CHMP3-204ENST00000409727 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
CHMP3-204ENST00000409727 USP26Q9BXU7 913 aa15.09■□□□□ 0.01
CHMP3-204ENST00000409727 ANTXR1Q9H6X2 564 aa15.09■□□□□ 0.01
CHMP3-204ENST00000409727 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0.01
CHMP3-204ENST00000409727 KCNJ4P48050 445 aa15.08■□□□□ 0.01
CHMP3-204ENST00000409727 CRY2Q49AN0 593 aa15.08■□□□□ 0.01
CHMP3-204ENST00000409727 RBM17Q96I25 401 aaKnown RBP15.08■□□□□ 0.01
CHMP3-204ENST00000409727 MCAMP43121 646 aa15.08■□□□□ 0
CHMP3-204ENST00000409727 ZAP70P43403 619 aa15.08■□□□□ 0
CHMP3-204ENST00000409727 BCAMP50895 628 aa15.08■□□□□ 0
CHMP3-204ENST00000409727 NMIQ13287 307 aaPredicted RBP15.08■□□□□ 0
CHMP3-204ENST00000409727 IPO9Q96P70 1041 aaKnown RBP15.08■□□□□ 0
CHMP3-204ENST00000409727 SGSM2O43147 1006 aa15.07■□□□□ 0
CHMP3-204ENST00000409727 RBM25P49756 843 aaKnown RBP15.07■□□□□ 0
CHMP3-204ENST00000409727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
CHMP3-204ENST00000409727 RUFY2Q8WXA3 655 aa15.07■□□□□ 0
CHMP3-204ENST00000409727 A0A0D9SFI3 127 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms