RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 GCKRQ14397 625 aa18.53■□□□□ 0.56
NIF3L1-205ENST00000409588 ANKRD18AQ8IVF6 992 aa18.53■□□□□ 0.56
NIF3L1-205ENST00000409588 TTLL11Q8NHH1 800 aa18.53■□□□□ 0.56
NIF3L1-205ENST00000409588 PLA2G12BQ9BX93 195 aa18.53■□□□□ 0.56
NIF3L1-205ENST00000409588 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
NIF3L1-205ENST00000409588 GPRC5DQ9NZD1 345 aa18.53■□□□□ 0.56
NIF3L1-205ENST00000409588 PASKQ96RG2 1323 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 POTEIP0CG38 1075 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 POTEJP0CG39 1038 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 CTSWP56202 376 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 GPSM2P81274 684 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 CNTROBQ8N137 903 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 ADARB2Q9NS39 739 aaKnown RBP18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 POLLQ9UGP5 575 aa18.52■□□□□ 0.56
NIF3L1-205ENST00000409588 RTL9Q8NET4 1388 aa18.52■□□□□ 0.55
NIF3L1-205ENST00000409588 ZNF521Q96K83 1311 aa18.51■□□□□ 0.55
NIF3L1-205ENST00000409588 EPS15P42566 896 aa18.51■□□□□ 0.55
NIF3L1-205ENST00000409588 CWF19L2Q2TBE0 894 aaKnown RBP18.51■□□□□ 0.55
NIF3L1-205ENST00000409588 TBC1D16Q8TBP0 767 aa18.51■□□□□ 0.55
NIF3L1-205ENST00000409588 DPF2Q92785 391 aa18.51■□□□□ 0.55
NIF3L1-205ENST00000409588 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
NIF3L1-205ENST00000409588 BSDC1Q9NW68 430 aaPredicted RBP18.51■□□□□ 0.55
NIF3L1-205ENST00000409588 COL4A5P29400 1685 aa18.5■□□□□ 0.55
NIF3L1-205ENST00000409588 LRRC37AA6NMS7 1700 aa18.5■□□□□ 0.55
NIF3L1-205ENST00000409588 CCER2I3L3R5 266 aa18.5■□□□□ 0.55
NIF3L1-205ENST00000409588 ZC3H15Q8WU90 426 aaKnown RBP18.5■□□□□ 0.55
NIF3L1-205ENST00000409588 BCL2L13Q9BXK5 485 aa18.5■□□□□ 0.55
NIF3L1-205ENST00000409588 GGA1Q9UJY5 639 aa18.5■□□□□ 0.55
NIF3L1-205ENST00000409588 TMEM88BA6NKF7 163 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 E9PSI1 815 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 H7C1D1 291 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 ATP2B4P23634 1241 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 RPS12P25398 132 aaKnown RBP18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 HTRA3P83110 453 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 SLC51AQ86UW1 340 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 XDHP47989 1333 aa18.49■□□□□ 0.55
NIF3L1-205ENST00000409588 G3V3G9 751 aa18.48■□□□□ 0.55
NIF3L1-205ENST00000409588 RAD17O75943 681 aa18.48■□□□□ 0.55
NIF3L1-205ENST00000409588 CSF1RP07333 972 aa18.48■□□□□ 0.55
NIF3L1-205ENST00000409588 GMPSP49915 693 aaPredicted RBP18.48■□□□□ 0.55
NIF3L1-205ENST00000409588 DCAF8Q5TAQ9 597 aa18.48■□□□□ 0.55
NIF3L1-205ENST00000409588 JARID2Q92833 1246 aaPredicted RBP18.48■□□□□ 0.55
NIF3L1-205ENST00000409588 PGAP2Q9UHJ9 254 aa18.48■□□□□ 0.55
NIF3L1-205ENST00000409588 YDJCA8MPS7 323 aa18.47■□□□□ 0.55
NIF3L1-205ENST00000409588 RIMBP2O15034 1052 aa18.47■□□□□ 0.55
NIF3L1-205ENST00000409588 TAF1P21675 1872 aa18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 UFL1O94874 794 aa18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 IGHMBP2P38935 993 aaKnown RBP18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 CASP7P55210 303 aa18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 BEND3Q5T5X7 828 aa18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 MAP1SQ66K74 1059 aaPredicted RBP18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 PODNQ7Z5L7 613 aa18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 GREM2Q9H772 168 aa18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 CNOT7Q9UIV1 285 aaKnown RBP18.46■□□□□ 0.55
NIF3L1-205ENST00000409588 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
NIF3L1-205ENST00000409588 ECE2O60344 883 aa18.45■□□□□ 0.54
NIF3L1-205ENST00000409588 ALDH1L1O75891 902 aa18.45■□□□□ 0.54
NIF3L1-205ENST00000409588 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
NIF3L1-205ENST00000409588 ANKRD2Q9GZV1 360 aa18.45■□□□□ 0.54
NIF3L1-205ENST00000409588 MINPP1Q9UNW1 487 aa18.45■□□□□ 0.54
NIF3L1-205ENST00000409588 LEMD3Q9Y2U8 911 aa18.45■□□□□ 0.54
NIF3L1-205ENST00000409588 DUOX1Q9NRD9 1551 aa18.44■□□□□ 0.54
NIF3L1-205ENST00000409588 VIL1P09327 827 aaKnown RBP18.44■□□□□ 0.54
NIF3L1-205ENST00000409588 MPHOSPH8Q99549 860 aa18.44■□□□□ 0.54
NIF3L1-205ENST00000409588 DBNDD1Q9H9R9 158 aa18.44■□□□□ 0.54
NIF3L1-205ENST00000409588 PSMD14O00487 310 aa18.43■□□□□ 0.54
NIF3L1-205ENST00000409588 ITGA6P23229 1130 aa18.43■□□□□ 0.54
NIF3L1-205ENST00000409588 MMP14P50281 582 aa18.43■□□□□ 0.54
NIF3L1-205ENST00000409588 ANKRD18BA2A2Z9 1011 aa18.42■□□□□ 0.54
NIF3L1-205ENST00000409588 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
NIF3L1-205ENST00000409588 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
NIF3L1-205ENST00000409588 DOK7Q18PE1 504 aa18.42■□□□□ 0.54
NIF3L1-205ENST00000409588 AGBL3Q8NEM8 1001 aa18.42■□□□□ 0.54
NIF3L1-205ENST00000409588 SRCIN1Q9C0H9 1055 aa18.42■□□□□ 0.54
NIF3L1-205ENST00000409588 PTPRCP08575 1304 aa18.42■□□□□ 0.54
NIF3L1-205ENST00000409588 GRM8O00222 908 aa18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 CCT4P50991 539 aaKnown RBP18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 IFIT5Q13325 482 aaKnown RBP18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 DEFB115Q30KQ5 88 aa18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 CDC37L1Q7L3B6 337 aa18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 MICALL2Q8IY33 904 aa18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 C9orf78Q9NZ63 289 aaPredicted RBP18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 CNTNAP1P78357 1384 aa18.41■□□□□ 0.54
NIF3L1-205ENST00000409588 LTBP1Q14766 1721 aa18.4■□□□□ 0.54
NIF3L1-205ENST00000409588 RASSF10A6NK89 507 aa18.4■□□□□ 0.54
NIF3L1-205ENST00000409588 F6X3S4 739 aa18.4■□□□□ 0.54
NIF3L1-205ENST00000409588 ALDH1L2Q3SY69 923 aa18.4■□□□□ 0.54
NIF3L1-205ENST00000409588 MED23Q9ULK4 1368 aa18.4■□□□□ 0.54
NIF3L1-205ENST00000409588 MYH3P11055 1940 aa18.39■□□□□ 0.53
NIF3L1-205ENST00000409588 FOXO4P98177 505 aa18.39■□□□□ 0.53
NIF3L1-205ENST00000409588 COA1Q9GZY4 146 aa18.39■□□□□ 0.53
NIF3L1-205ENST00000409588 ZNF609O15014 1411 aa18.39■□□□□ 0.53
NIF3L1-205ENST00000409588 USP17L3A6NCW0 530 aa18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 USP17L4A6NCW7 530 aa18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 HIRAP54198 1017 aaPredicted RBP18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 CCDC57Q2TAC2 916 aa18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 SLC4A10Q6U841 1118 aa18.38■□□□□ 0.53
NIF3L1-205ENST00000409588 USP17L1Q7RTZ2 530 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms