RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 KIF23Q02241 960 aaPredicted RBP16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 SF3B3Q15393 1217 aaKnown RBP16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 RGMBQ6NW40 437 aa16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 CHL1O00533 1208 aa16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 NEUROD2Q15784 382 aa16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
CHRNA1-205ENST00000409542 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
CHRNA1-205ENST00000409542 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
CHRNA1-205ENST00000409542 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
CHRNA1-205ENST00000409542 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
CHRNA1-205ENST00000409542 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
CHRNA1-205ENST00000409542 C2orf69Q8N8R5 385 aa16.46■□□□□ 0.23
CHRNA1-205ENST00000409542 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
CHRNA1-205ENST00000409542 RNF186Q9NXI6 227 aa16.46■□□□□ 0.23
CHRNA1-205ENST00000409542 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
CHRNA1-205ENST00000409542 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
CHRNA1-205ENST00000409542 TRPA1O75762 1119 aa16.45■□□□□ 0.22
CHRNA1-205ENST00000409542 ZNF157P51786 506 aaPredicted RBP16.45■□□□□ 0.22
CHRNA1-205ENST00000409542 DCPSQ96C86 337 aaKnown RBP16.45■□□□□ 0.22
CHRNA1-205ENST00000409542 IRS4O14654 1257 aaPredicted RBP16.44■□□□□ 0.22
CHRNA1-205ENST00000409542 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
CHRNA1-205ENST00000409542 RPS12P25398 132 aaKnown RBP16.44■□□□□ 0.22
CHRNA1-205ENST00000409542 KIF4BQ2VIQ3 1234 aa16.44■□□□□ 0.22
CHRNA1-205ENST00000409542 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
CHRNA1-205ENST00000409542 CSRNP1Q96S65 589 aa16.44■□□□□ 0.22
CHRNA1-205ENST00000409542 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
CHRNA1-205ENST00000409542 SOX10P56693 466 aa16.43■□□□□ 0.22
CHRNA1-205ENST00000409542 RPS8P62241 208 aaKnown RBP16.43■□□□□ 0.22
CHRNA1-205ENST00000409542 LMOD3Q0VAK6 560 aa16.43■□□□□ 0.22
CHRNA1-205ENST00000409542 CCDC102AQ96A19 550 aa16.43■□□□□ 0.22
CHRNA1-205ENST00000409542 GGA3Q9NZ52 723 aa16.43■□□□□ 0.22
CHRNA1-205ENST00000409542 SLC10A3P09131 477 aa16.42■□□□□ 0.22
CHRNA1-205ENST00000409542 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
CHRNA1-205ENST00000409542 EYA3Q99504 573 aa16.42■□□□□ 0.22
CHRNA1-205ENST00000409542 SAGE1Q9NXZ1 904 aa16.42■□□□□ 0.22
CHRNA1-205ENST00000409542 CDCA5Q96FF9 252 aa16.42■□□□□ 0.22
CHRNA1-205ENST00000409542 SCAF8Q9UPN6 1271 aaKnown RBP16.42■□□□□ 0.22
CHRNA1-205ENST00000409542 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
CHRNA1-205ENST00000409542 RALBP1Q15311 655 aa16.41■□□□□ 0.22
CHRNA1-205ENST00000409542 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
CHRNA1-205ENST00000409542 ZC3H12CQ9C0D7 883 aaKnown RBP16.41■□□□□ 0.22
CHRNA1-205ENST00000409542 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
CHRNA1-205ENST00000409542 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
CHRNA1-205ENST00000409542 UFL1O94874 794 aa16.4■□□□□ 0.22
CHRNA1-205ENST00000409542 TRIM28Q13263 835 aaKnown RBP16.4■□□□□ 0.22
CHRNA1-205ENST00000409542 SCARF1Q14162 830 aa16.4■□□□□ 0.22
CHRNA1-205ENST00000409542 ANGEL2Q5VTE6 544 aaKnown RBP16.4■□□□□ 0.22
CHRNA1-205ENST00000409542 SULF1Q8IWU6 871 aa16.4■□□□□ 0.22
CHRNA1-205ENST00000409542 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 ZNF280AP59817 542 aaPredicted RBP16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 ERICH6BQ5W0A0 696 aa16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 MOB2Q70IA6 237 aa16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 RASAL3Q86YV0 1011 aa16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 CCDC85AQ96PX6 553 aaPredicted RBP16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
CHRNA1-205ENST00000409542 HOXB7P09629 217 aa16.38■□□□□ 0.21
CHRNA1-205ENST00000409542 RSBN1LQ6PCB5 846 aaPredicted RBP16.38■□□□□ 0.21
CHRNA1-205ENST00000409542 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
CHRNA1-205ENST00000409542 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
CHRNA1-205ENST00000409542 PDE4DIPQ5VU43 2346 aa16.38■□□□□ 0.21
CHRNA1-205ENST00000409542 PRAMEF18Q5VWM3 479 aa16.37■□□□□ 0.21
CHRNA1-205ENST00000409542 GMLQ99445 158 aa16.37■□□□□ 0.21
CHRNA1-205ENST00000409542 ANKIB1Q9P2G1 1089 aa16.37■□□□□ 0.21
CHRNA1-205ENST00000409542 GGA1Q9UJY5 639 aa16.37■□□□□ 0.21
CHRNA1-205ENST00000409542 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
CHRNA1-205ENST00000409542 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
CHRNA1-205ENST00000409542 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
CHRNA1-205ENST00000409542 MYD88Q99836 296 aa16.36■□□□□ 0.21
CHRNA1-205ENST00000409542 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
CHRNA1-205ENST00000409542 PSME4Q14997 1843 aa16.36■□□□□ 0.21
CHRNA1-205ENST00000409542 G3V3G9 751 aa16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 CTU1Q7Z7A3 348 aaKnown RBP16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 AGBL3Q8NEM8 1001 aa16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 UBE2Q2LH0YL09 131 aa16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 MXD3Q9BW11 206 aa16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 MYOZ2Q9NPC6 264 aa16.35■□□□□ 0.21
CHRNA1-205ENST00000409542 ZNF609O15014 1411 aa16.34■□□□□ 0.21
CHRNA1-205ENST00000409542 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
CHRNA1-205ENST00000409542 PAPPA2Q9BXP8 1791 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 PDE8AO60658 829 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 TBC1D8O95759 1140 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 PCCAP05165 728 aaPredicted RBP16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 USP17L8P0C7I0 530 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 ZNF853P0CG23 659 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 PCDH10Q9P2E7 1040 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
CHRNA1-205ENST00000409542 USP17L3A6NCW0 530 aa16.32■□□□□ 0.2
CHRNA1-205ENST00000409542 USP17L4A6NCW7 530 aa16.32■□□□□ 0.2
CHRNA1-205ENST00000409542 GOLGA2Q08379 1002 aa16.32■□□□□ 0.2
CHRNA1-205ENST00000409542 CCDC152Q4G0S7 254 aa16.32■□□□□ 0.2
CHRNA1-205ENST00000409542 USP17L1Q7RTZ2 530 aa16.32■□□□□ 0.2
CHRNA1-205ENST00000409542 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
CHRNA1-205ENST00000409542 XDHP47989 1333 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms