RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 H7C1D1 291 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 KRT85P78386 507 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 SRPK1Q96SB4 655 aaKnown RBP3.84□□□□□ -1.79
NEB-204ENST00000409198 SIL1Q9H173 461 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 TSPY26PQ9H489 355 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.84□□□□□ -1.79
NEB-204ENST00000409198 MRVI1Q9Y6F6 885 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 ANO6Q4KMQ2 910 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 CEP128Q6ZU80 1094 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 ZBED2Q9BTP6 218 aa3.84□□□□□ -1.79
NEB-204ENST00000409198 CRNKL1Q9BZJ0 848 aaKnown RBP3.84□□□□□ -1.79
NEB-204ENST00000409198 TSPY2A6NKD2 308 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 CCDC192P0DO97 292 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 INPP1P49441 399 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 USP48Q86UV5 1035 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 TNMDQ9H2S6 317 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 MMRN2Q9H8L6 949 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 CCDC144AA2RUR9 1427 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 EEF2P13639 858 aaKnown RBP3.84□□□□□ -1.8
NEB-204ENST00000409198 PPFIA2O75334 1257 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 TMC2Q8TDI7 906 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 FANCD2Q9BXW9 1451 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 BIRC3Q13489 604 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 SETDB2Q96T68 719 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 TSPY3P0CV98 308 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 TSPY8P0CW00 308 aa3.84□□□□□ -1.8
NEB-204ENST00000409198 SPDYE3A6NKU9 549 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 GNAQP50148 359 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 MPRIPQ6WCQ1 1025 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 PATL1Q86TB9 770 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 DDX11Q96FC9 970 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 NLRP3Q96P20 1036 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 PANK3Q9H999 370 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 STX10O60499 249 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 MARCKSP29966 332 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 PALM2Q8IXS6 379 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 NBPF6Q5VWK0 638 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 NBPF5PQ86XG9 351 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 TICAM2Q86XR7 235 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 IFT81Q8WYA0 676 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 NBPF4Q96M43 638 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CCDC85AQ96PX6 553 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 KCNG1Q9UIX4 513 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CARMIL1Q5VZK9 1371 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 SLC12A2P55011 1212 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 SARNPP82979 210 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 NAP1L4Q99733 375 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 ZNF277Q9NRM2 450 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 PBRM1Q86U86 1689 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 ZSCAN12O43309 604 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 IDEP14735 1019 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 PPFIA1Q13136 1202 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 E4F1Q66K89 784 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 C4orf50Q6ZRC1 276 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 LMBR1Q8WVP7 490 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 FNDC3AQ9Y2H6 1198 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 RPGRIP1LQ68CZ1 1315 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 SPECC1L-ADORA2AF8WAN1 911 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 NBPF7P0C2Y1 421 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 SH2D4BQ5SQS7 431 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 PPP2R3CQ969Q6 453 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 UPF3BQ9BZI7 483 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 TRIM7Q9C029 511 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CCDC160A6NGH7 325 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 ZNF804AQ7Z570 1209 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 BBS5Q8N3I7 341 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 GPATCH11Q8N954 259 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 JAKMIP2Q96AA8 810 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 DACT3Q96B18 629 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 NOX5Q96PH1 765 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 HEXIM1O94992 359 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 RXRBP28702 533 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 HLTFQ14527 1009 aaKnown RBP eCLIP3.83□□□□□ -1.8
NEB-204ENST00000409198 ABI1Q8IZP0 508 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 ABL1P00519 1130 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 MRE11P49959 708 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 PRKCQQ04759 706 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CFAP100Q494V2 611 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 STMN4Q9H169 189 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 CSRNP2Q9H175 543 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CCDC87Q9NVE4 849 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CASQ1P31415 396 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 TTLL7Q6ZT98 887 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 ZNF830Q96NB3 372 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 PLEKHG3A1L390 1219 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 SLC4A8Q2Y0W8 1093 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 TTC14Q96N46 770 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 SCAPERQ9BY12 1400 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 POLR2BP30876 1174 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 NUTM1Q86Y26 1132 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CDK19Q9BWU1 502 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 UHRF1BP1Q6BDS2 1440 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CALCOCO2Q13137 446 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 TRPC3Q13507 836 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CCDC65Q8IXS2 484 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 ARHGEF10LQ9HCE6 1279 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 CWC25Q9NXE8 425 aaPredicted RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 IFIT3O14879 490 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 ZBED4O75132 1171 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 S100BP04271 92 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms