RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
PTMA-202ENST00000409115 MTMR2Q13614 643 aa13.01□□□□□ -0.33
PTMA-202ENST00000409115 AMOTQ4VCS5 1084 aa13.01□□□□□ -0.33
PTMA-202ENST00000409115 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
PTMA-202ENST00000409115 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
PTMA-202ENST00000409115 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
PTMA-202ENST00000409115 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
PTMA-202ENST00000409115 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
PTMA-202ENST00000409115 C6orf229H3BNL8 230 aa13□□□□□ -0.33
PTMA-202ENST00000409115 PRELPP51888 382 aa13□□□□□ -0.33
PTMA-202ENST00000409115 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
PTMA-202ENST00000409115 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
PTMA-202ENST00000409115 RRAGCQ9HB90 399 aa13□□□□□ -0.33
PTMA-202ENST00000409115 LGR6Q9HBX8 967 aa13□□□□□ -0.33
PTMA-202ENST00000409115 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
PTMA-202ENST00000409115 HMOX1P09601 288 aa12.99□□□□□ -0.33
PTMA-202ENST00000409115 TMEM259Q4ZIN3 620 aa12.99□□□□□ -0.33
PTMA-202ENST00000409115 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
PTMA-202ENST00000409115 SLC27A5Q9Y2P5 690 aa12.99□□□□□ -0.33
PTMA-202ENST00000409115 IL13P35225 146 aa12.98□□□□□ -0.33
PTMA-202ENST00000409115 NFIXQ14938 502 aa12.98□□□□□ -0.33
PTMA-202ENST00000409115 Q3C1V9 767 aa12.98□□□□□ -0.33
PTMA-202ENST00000409115 NYAP1Q6ZVC0 841 aa12.98□□□□□ -0.33
PTMA-202ENST00000409115 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
PTMA-202ENST00000409115 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
PTMA-202ENST00000409115 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
PTMA-202ENST00000409115 PTPN5P54829 565 aa12.97□□□□□ -0.33
PTMA-202ENST00000409115 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.333e-37■□□□□ 9.8
PTMA-202ENST00000409115 MCM6Q14566 821 aa12.97□□□□□ -0.33
PTMA-202ENST00000409115 KLRG1Q96E93 195 aa12.97□□□□□ -0.33
PTMA-202ENST00000409115 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
PTMA-202ENST00000409115 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
PTMA-202ENST00000409115 ZPR1O75312 459 aa12.96□□□□□ -0.33
PTMA-202ENST00000409115 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.33
PTMA-202ENST00000409115 TM4SF1P30408 202 aa12.96□□□□□ -0.33
PTMA-202ENST00000409115 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
PTMA-202ENST00000409115 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
PTMA-202ENST00000409115 BANK1Q8NDB2 785 aa12.96□□□□□ -0.33
PTMA-202ENST00000409115 LAMB4A4D0S4 1761 aa12.96□□□□□ -0.34
PTMA-202ENST00000409115 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.34
PTMA-202ENST00000409115 NR1I2O75469 434 aa12.95□□□□□ -0.34
PTMA-202ENST00000409115 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
PTMA-202ENST00000409115 BLOC1S3Q6QNY0 202 aa12.95□□□□□ -0.34
PTMA-202ENST00000409115 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
PTMA-202ENST00000409115 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
PTMA-202ENST00000409115 AP1G2O75843 785 aa12.94□□□□□ -0.34
PTMA-202ENST00000409115 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
PTMA-202ENST00000409115 NFKBIEO00221 500 aa12.93□□□□□ -0.34
PTMA-202ENST00000409115 SERPINB2P05120 415 aa12.93□□□□□ -0.34
PTMA-202ENST00000409115 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
PTMA-202ENST00000409115 FSTL1Q12841 308 aa12.93□□□□□ -0.34
PTMA-202ENST00000409115 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
PTMA-202ENST00000409115 MTHFSDQ2M296 383 aaKnown RBP12.93□□□□□ -0.34
PTMA-202ENST00000409115 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
PTMA-202ENST00000409115 TSC1Q92574 1164 aa12.93□□□□□ -0.34
PTMA-202ENST00000409115 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
PTMA-202ENST00000409115 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
PTMA-202ENST00000409115 RETREG3Q86VR2 466 aa12.92□□□□□ -0.34
PTMA-202ENST00000409115 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
PTMA-202ENST00000409115 SCUBE3Q8IX30 993 aa12.92□□□□□ -0.34
PTMA-202ENST00000409115 JMYQ8N9B5 988 aa12.92□□□□□ -0.34
PTMA-202ENST00000409115 ZNF330Q9Y3S2 320 aaPredicted RBP12.92□□□□□ -0.34
PTMA-202ENST00000409115 SCN4AP35499 1836 aa12.91□□□□□ -0.34
PTMA-202ENST00000409115 COPS2P61201 443 aa12.91□□□□□ -0.34
PTMA-202ENST00000409115 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
PTMA-202ENST00000409115 SMC1BQ8NDV3 1235 aa12.91□□□□□ -0.34
PTMA-202ENST00000409115 KIF7Q2M1P5 1343 aa12.9□□□□□ -0.34
PTMA-202ENST00000409115 CFAP99D6REC4 459 aa12.9□□□□□ -0.34
PTMA-202ENST00000409115 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
PTMA-202ENST00000409115 USP17L8P0C7I0 530 aa12.9□□□□□ -0.34
PTMA-202ENST00000409115 LMNB1P20700 586 aa12.9□□□□□ -0.34
PTMA-202ENST00000409115 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
PTMA-202ENST00000409115 PRR7Q8TB68 274 aa12.9□□□□□ -0.34
PTMA-202ENST00000409115 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
PTMA-202ENST00000409115 NUP98P52948 1817 aa12.9□□□□□ -0.34
PTMA-202ENST00000409115 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
PTMA-202ENST00000409115 CC2D1BQ5T0F9 858 aaKnown RBP12.89□□□□□ -0.35
PTMA-202ENST00000409115 TTLL6Q8N841 843 aa12.89□□□□□ -0.35
PTMA-202ENST00000409115 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
PTMA-202ENST00000409115 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
PTMA-202ENST00000409115 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
PTMA-202ENST00000409115 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
PTMA-202ENST00000409115 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
PTMA-202ENST00000409115 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
PTMA-202ENST00000409115 HEG1Q9ULI3 1381 aa12.88□□□□□ -0.35
PTMA-202ENST00000409115 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
PTMA-202ENST00000409115 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
PTMA-202ENST00000409115 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
PTMA-202ENST00000409115 POTECB2RU33 542 aa12.87□□□□□ -0.35
PTMA-202ENST00000409115 C21orf2O43822 256 aa12.87□□□□□ -0.35
PTMA-202ENST00000409115 PRR5LQ6MZQ0 368 aa12.87□□□□□ -0.35
PTMA-202ENST00000409115 BRICD5Q6PL45 260 aa12.87□□□□□ -0.35
PTMA-202ENST00000409115 TNS4Q8IZW8 715 aa12.87□□□□□ -0.35
PTMA-202ENST00000409115 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.354e-24■■■■□ 23.6
PTMA-202ENST00000409115 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
PTMA-202ENST00000409115 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
PTMA-202ENST00000409115 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
PTMA-202ENST00000409115 H0YIN7 160 aa12.86□□□□□ -0.35
PTMA-202ENST00000409115 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
PTMA-202ENST00000409115 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms