RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 USPL1Q5W0Q7 1092 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 TPTE2Q6XPS3 522 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
POLR1A-202ENST00000409024 EVI5LQ96CN4 794 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 SIL1Q9H173 461 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 LAMB2P55268 1798 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 MYH3P11055 1940 aa11.94□□□□□ -0.5
POLR1A-202ENST00000409024 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
POLR1A-202ENST00000409024 ATP5JP18859 108 aa11.93□□□□□ -0.5
POLR1A-202ENST00000409024 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
POLR1A-202ENST00000409024 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
POLR1A-202ENST00000409024 C22orf23Q9BZE7 217 aa11.93□□□□□ -0.5
POLR1A-202ENST00000409024 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
POLR1A-202ENST00000409024 RIPOR2Q9Y4F9 1068 aa11.93□□□□□ -0.5
POLR1A-202ENST00000409024 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
POLR1A-202ENST00000409024 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 MROH5Q6ZUA9 1318 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 HTRA3P83110 453 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 RUFY2Q8WXA3 655 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
POLR1A-202ENST00000409024 GREM2Q9H772 168 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 RIC1Q4ADV7 1423 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
POLR1A-202ENST00000409024 CHMLP26374 656 aa11.91□□□□□ -0.5
POLR1A-202ENST00000409024 MFAP1P55081 439 aaKnown RBP11.91□□□□□ -0.5
POLR1A-202ENST00000409024 LRRC24Q50LG9 513 aa11.91□□□□□ -0.5
POLR1A-202ENST00000409024 TBC1D9BQ66K14 1250 aa11.91□□□□□ -0.5
POLR1A-202ENST00000409024 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
POLR1A-202ENST00000409024 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
POLR1A-202ENST00000409024 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
POLR1A-202ENST00000409024 CARMIL3Q8ND23 1372 aa11.91□□□□□ -0.5
POLR1A-202ENST00000409024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
POLR1A-202ENST00000409024 ZNF609O15014 1411 aa11.9□□□□□ -0.5
POLR1A-202ENST00000409024 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
POLR1A-202ENST00000409024 IGHMBP2P38935 993 aaKnown RBP11.9□□□□□ -0.5
POLR1A-202ENST00000409024 FSTL1Q12841 308 aa11.9□□□□□ -0.5
POLR1A-202ENST00000409024 NBPF5PQ86XG9 351 aaPredicted RBP11.9□□□□□ -0.5
POLR1A-202ENST00000409024 SYNE4Q8N205 404 aa11.9□□□□□ -0.5
POLR1A-202ENST00000409024 ZNF512BQ96KM6 892 aaPredicted RBP11.9□□□□□ -0.5
POLR1A-202ENST00000409024 NLRP3Q96P20 1036 aa11.9□□□□□ -0.5
POLR1A-202ENST00000409024 NMRK2Q9NPI5 230 aa11.9□□□□□ -0.5
POLR1A-202ENST00000409024 CNNM1Q9NRU3 951 aa11.9□□□□□ -0.5
POLR1A-202ENST00000409024 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
POLR1A-202ENST00000409024 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
POLR1A-202ENST00000409024 PDE8BO95263 885 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
POLR1A-202ENST00000409024 BECN1Q14457 450 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 METTL24Q5JXM2 366 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
POLR1A-202ENST00000409024 MPHOSPH8Q99549 860 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 HAUS7Q99871 368 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 USP26Q9BXU7 913 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 SRP68Q9UHB9 627 aaKnown RBP11.89□□□□□ -0.51
POLR1A-202ENST00000409024 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
POLR1A-202ENST00000409024 RAD50Q92878 1312 aa11.88□□□□□ -0.51
POLR1A-202ENST00000409024 A0A1B0GUL7 405 aa11.88□□□□□ -0.51
POLR1A-202ENST00000409024 LRRFIP1Q32MZ4 808 aaKnown RBP11.88□□□□□ -0.51
POLR1A-202ENST00000409024 ERFEQ4G0M1 354 aa11.88□□□□□ -0.51
POLR1A-202ENST00000409024 TSHZ3Q63HK5 1081 aa11.88□□□□□ -0.51
POLR1A-202ENST00000409024 PUS3Q9BZE2 481 aaKnown RBP11.88□□□□□ -0.51
POLR1A-202ENST00000409024 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
POLR1A-202ENST00000409024 ZBTB22O15209 634 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 GYS1P13807 737 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 MCCP23508 829 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 TM4SF1P30408 202 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 PUM3Q15397 648 aaKnown RBP11.87□□□□□ -0.51
POLR1A-202ENST00000409024 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 VGLL2Q8N8G2 317 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 LPIN2Q92539 896 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 NEUROD6Q96NK8 337 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
POLR1A-202ENST00000409024 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
POLR1A-202ENST00000409024 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 SGSM2O43147 1006 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 UQCRFS1P1P0C7P4 283 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 FGFR2P21802 821 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 ANAPC15P60006 121 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 TIMM10P62072 90 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 NFIXQ14938 502 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 ANKRD18AQ8IVF6 992 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 IL17RAQ96F46 866 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 XAGE2Q96GT9 111 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 DIAPH3Q9NSV4 1193 aa11.86□□□□□ -0.51
POLR1A-202ENST00000409024 TLR7Q9NYK1 1049 aaKnown RBP11.86□□□□□ -0.51
POLR1A-202ENST00000409024 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
POLR1A-202ENST00000409024 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 PHF14O94880 888 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 IFIT1P09914 478 aaKnown RBP11.85□□□□□ -0.51
POLR1A-202ENST00000409024 HSPA1AP0DMV8 641 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms