RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 IFT57Q9NWB7 429 aa16.74■□□□□ 0.27
PRAME-206ENST00000406503 ZNF609O15014 1411 aa16.73■□□□□ 0.27
PRAME-206ENST00000406503 DOK7Q18PE1 504 aa16.73■□□□□ 0.27
PRAME-206ENST00000406503 TBC1D10BQ4KMP7 808 aaPredicted RBP16.73■□□□□ 0.27
PRAME-206ENST00000406503 ZBTB38Q8NAP3 1195 aaPredicted RBP16.73■□□□□ 0.27
PRAME-206ENST00000406503 C8orf58Q8NAV2 365 aa16.73■□□□□ 0.27
PRAME-206ENST00000406503 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
PRAME-206ENST00000406503 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
PRAME-206ENST00000406503 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
PRAME-206ENST00000406503 H7C1D1 291 aa16.72■□□□□ 0.27
PRAME-206ENST00000406503 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
PRAME-206ENST00000406503 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
PRAME-206ENST00000406503 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
PRAME-206ENST00000406503 USP48Q86UV5 1035 aa16.72■□□□□ 0.27
PRAME-206ENST00000406503 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
PRAME-206ENST00000406503 MYD88Q99836 296 aa16.72■□□□□ 0.27
PRAME-206ENST00000406503 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
PRAME-206ENST00000406503 ADM5C9JUS6 153 aa16.7■□□□□ 0.26
PRAME-206ENST00000406503 PCCAP05165 728 aaPredicted RBP16.7■□□□□ 0.26
PRAME-206ENST00000406503 BRPF1P55201 1214 aaPredicted RBP16.7■□□□□ 0.26
PRAME-206ENST00000406503 GNAI1P63096 354 aa16.7■□□□□ 0.26
PRAME-206ENST00000406503 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
PRAME-206ENST00000406503 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
PRAME-206ENST00000406503 ECM29Q5VYK3 1845 aa16.69■□□□□ 0.26
PRAME-206ENST00000406503 FAM155AB1AL88 458 aaPredicted RBP16.69■□□□□ 0.26
PRAME-206ENST00000406503 VIL1P09327 827 aaKnown RBP16.69■□□□□ 0.26
PRAME-206ENST00000406503 RPS12P25398 132 aaKnown RBP16.69■□□□□ 0.26
PRAME-206ENST00000406503 CCDC191Q8NCU4 936 aa16.69■□□□□ 0.26
PRAME-206ENST00000406503 EYA3Q99504 573 aa16.69■□□□□ 0.26
PRAME-206ENST00000406503 WTIPA6NIX2 430 aaPredicted RBP16.68■□□□□ 0.26
PRAME-206ENST00000406503 PDE8AO60658 829 aa16.68■□□□□ 0.26
PRAME-206ENST00000406503 UFL1O94874 794 aa16.68■□□□□ 0.26
PRAME-206ENST00000406503 KRT26Q7Z3Y9 468 aa16.68■□□□□ 0.26
PRAME-206ENST00000406503 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
PRAME-206ENST00000406503 BEGAINQ9BUH8 593 aa16.68■□□□□ 0.26
PRAME-206ENST00000406503 METTL22Q9BUU2 404 aaPredicted RBP16.68■□□□□ 0.26
PRAME-206ENST00000406503 PAPPA2Q9BXP8 1791 aa16.67■□□□□ 0.26
PRAME-206ENST00000406503 IGKV5-2P06315 115 aa16.67■□□□□ 0.26
PRAME-206ENST00000406503 HUNKP57058 714 aa16.67■□□□□ 0.26
PRAME-206ENST00000406503 KIF4BQ2VIQ3 1234 aa16.67■□□□□ 0.26
PRAME-206ENST00000406503 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
PRAME-206ENST00000406503 RBM26Q5T8P6 1007 aaKnown RBP16.67■□□□□ 0.26
PRAME-206ENST00000406503 CWC25Q9NXE8 425 aaPredicted RBP16.67■□□□□ 0.26
PRAME-206ENST00000406503 CCDC152Q4G0S7 254 aa16.66■□□□□ 0.26
PRAME-206ENST00000406503 ZC3H12CQ9C0D7 883 aaKnown RBP16.66■□□□□ 0.26
PRAME-206ENST00000406503 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
PRAME-206ENST00000406503 GGA1Q9UJY5 639 aa16.66■□□□□ 0.26
PRAME-206ENST00000406503 LAMB1P07942 1786 aa16.65■□□□□ 0.26
PRAME-206ENST00000406503 CA12O43570 354 aa16.65■□□□□ 0.26
PRAME-206ENST00000406503 ZNF280AP59817 542 aaPredicted RBP16.65■□□□□ 0.26
PRAME-206ENST00000406503 NOGQ13253 232 aa16.65■□□□□ 0.26
PRAME-206ENST00000406503 GMLQ99445 158 aa16.65■□□□□ 0.26
PRAME-206ENST00000406503 GBA2Q9HCG7 927 aaPredicted RBP16.65■□□□□ 0.26
PRAME-206ENST00000406503 MAP3K2Q9Y2U5 619 aa16.65■□□□□ 0.26
PRAME-206ENST00000406503 FAM161AQ3B820 660 aa16.64■□□□□ 0.25
PRAME-206ENST00000406503 RGMBQ6NW40 437 aa16.64■□□□□ 0.25
PRAME-206ENST00000406503 RSBN1LQ6PCB5 846 aaPredicted RBP16.64■□□□□ 0.25
PRAME-206ENST00000406503 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
PRAME-206ENST00000406503 MCOLN1Q9GZU1 580 aa16.64■□□□□ 0.25
PRAME-206ENST00000406503 ANKIB1Q9P2G1 1089 aa16.64■□□□□ 0.25
PRAME-206ENST00000406503 XDHP47989 1333 aa16.64■□□□□ 0.25
PRAME-206ENST00000406503 PI4KAP2A4QPH2 592 aa16.63■□□□□ 0.25
PRAME-206ENST00000406503 CTSWP56202 376 aa16.63■□□□□ 0.25
PRAME-206ENST00000406503 CALD1Q05682 793 aaKnown RBP16.63■□□□□ 0.25
PRAME-206ENST00000406503 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
PRAME-206ENST00000406503 G2E3Q7L622 706 aa16.63■□□□□ 0.25
PRAME-206ENST00000406503 PI4KAP1Q8N8J0 262 aa16.63■□□□□ 0.25
PRAME-206ENST00000406503 TTLL11Q8NHH1 800 aa16.63■□□□□ 0.25
PRAME-206ENST00000406503 DCPSQ96C86 337 aaKnown RBP16.63■□□□□ 0.25
PRAME-206ENST00000406503 CENPFP49454 3210 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 RGS19P49795 217 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 CWF19L2Q2TBE0 894 aaKnown RBP16.62■□□□□ 0.25
PRAME-206ENST00000406503 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 CDCA5Q96FF9 252 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 GREM2Q9H772 168 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 MED23Q9ULK4 1368 aa16.62■□□□□ 0.25
PRAME-206ENST00000406503 HTTP42858 3142 aa16.61■□□□□ 0.25
PRAME-206ENST00000406503 CCDC85CA6NKD9 419 aa16.61■□□□□ 0.25
PRAME-206ENST00000406503 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
PRAME-206ENST00000406503 ANGEL2Q5VTE6 544 aaKnown RBP16.61■□□□□ 0.25
PRAME-206ENST00000406503 C2orf69Q8N8R5 385 aa16.61■□□□□ 0.25
PRAME-206ENST00000406503 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
PRAME-206ENST00000406503 SLC10A3P09131 477 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 ATP2B4P23634 1241 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 KIF23Q02241 960 aaPredicted RBP16.6■□□□□ 0.25
PRAME-206ENST00000406503 SCARF1Q14162 830 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 TXNRD3Q86VQ6 643 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 MXD3Q9BW11 206 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 MINPP1Q9UNW1 487 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 SCAF8Q9UPN6 1271 aaKnown RBP16.6■□□□□ 0.25
PRAME-206ENST00000406503 PDE4DIPQ5VU43 2346 aa16.6■□□□□ 0.25
PRAME-206ENST00000406503 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
PRAME-206ENST00000406503 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
PRAME-206ENST00000406503 MYOZ2Q9NPC6 264 aa16.59■□□□□ 0.25
PRAME-206ENST00000406503 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
PRAME-206ENST00000406503 BRCA2P51587 3418 aa16.58■□□□□ 0.24
PRAME-206ENST00000406503 USP17L3A6NCW0 530 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms