RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 LAMB2P55268 1798 aa13.33□□□□□ -0.28
RPAIN-204ENST00000405578 BCAR3O75815 825 aa13.33□□□□□ -0.28
RPAIN-204ENST00000405578 MS4A1P11836 297 aa13.33□□□□□ -0.28
RPAIN-204ENST00000405578 HSP90B1P14625 803 aaKnown RBP13.33□□□□□ -0.28
RPAIN-204ENST00000405578 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-204ENST00000405578 TRIM28Q13263 835 aaKnown RBP13.33□□□□□ -0.28
RPAIN-204ENST00000405578 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
RPAIN-204ENST00000405578 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.28
RPAIN-204ENST00000405578 CCDC191Q8NCU4 936 aa13.33□□□□□ -0.28
RPAIN-204ENST00000405578 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
RPAIN-204ENST00000405578 UTP14AQ9BVJ6 771 aaKnown RBP13.33□□□□□ -0.28
RPAIN-204ENST00000405578 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
RPAIN-204ENST00000405578 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-204ENST00000405578 HUNKP57058 714 aa13.32□□□□□ -0.28
RPAIN-204ENST00000405578 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-204ENST00000405578 AOC3Q16853 763 aa13.32□□□□□ -0.28
RPAIN-204ENST00000405578 NLRP10Q86W26 655 aa13.32□□□□□ -0.28
RPAIN-204ENST00000405578 ISCA1Q9BUE6 129 aa13.32□□□□□ -0.28
RPAIN-204ENST00000405578 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-204ENST00000405578 F6X3S4 739 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
RPAIN-204ENST00000405578 CXCL9Q07325 125 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 FTSJ3Q8IY81 847 aaKnown RBP13.31□□□□□ -0.28
RPAIN-204ENST00000405578 TRPM4Q8TD43 1214 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 SRCIN1Q9C0H9 1055 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 SAGE1Q9NXZ1 904 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 PGAP2Q9UHJ9 254 aa13.31□□□□□ -0.28
RPAIN-204ENST00000405578 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
RPAIN-204ENST00000405578 HOXA10P31260 410 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-204ENST00000405578 HIRAP54198 1017 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-204ENST00000405578 CDHR2Q9BYE9 1310 aa13.3□□□□□ -0.28
RPAIN-204ENST00000405578 IBTKQ9P2D0 1353 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-204ENST00000405578 TAF1P21675 1872 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 NEURL1BA8MQ27 555 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 FAM155AB1AL88 458 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-204ENST00000405578 TRPA1O75762 1119 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 ALDH1L1O75891 902 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 BEND3Q5T5X7 828 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 SUSD4Q5VX71 490 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 DLK2Q6UY11 383 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 USP48Q86UV5 1035 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 ZC3H15Q8WU90 426 aaKnown RBP13.29□□□□□ -0.28
RPAIN-204ENST00000405578 RBM17Q96I25 401 aaKnown RBP13.29□□□□□ -0.28
RPAIN-204ENST00000405578 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 SH3TC1Q8TE82 1336 aa13.29□□□□□ -0.28
RPAIN-204ENST00000405578 ANKRD36CQ5JPF3 1778 aa13.28□□□□□ -0.28
RPAIN-204ENST00000405578 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
RPAIN-204ENST00000405578 IGKV5-2P06315 115 aa13.28□□□□□ -0.28
RPAIN-204ENST00000405578 TRIM27P14373 513 aa13.28□□□□□ -0.28
RPAIN-204ENST00000405578 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-204ENST00000405578 CWF19L2Q2TBE0 894 aaKnown RBP13.28□□□□□ -0.28
RPAIN-204ENST00000405578 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
RPAIN-204ENST00000405578 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-204ENST00000405578 CRAMP1Q96RY5 1269 aa13.28□□□□□ -0.28
RPAIN-204ENST00000405578 RNF186Q9NXI6 227 aa13.28□□□□□ -0.28
RPAIN-204ENST00000405578 C9orf78Q9NZ63 289 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-204ENST00000405578 RAD17O75943 681 aa13.27□□□□□ -0.29
RPAIN-204ENST00000405578 NTSR2O95665 410 aa13.27□□□□□ -0.29
RPAIN-204ENST00000405578 PCCAP05165 728 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-204ENST00000405578 GCKRQ14397 625 aa13.27□□□□□ -0.29
RPAIN-204ENST00000405578 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
RPAIN-204ENST00000405578 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
RPAIN-204ENST00000405578 HDAC5Q9UQL6 1122 aa13.27□□□□□ -0.29
RPAIN-204ENST00000405578 CENPBP07199 599 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-204ENST00000405578 DDX60Q8IY21 1712 aaKnown RBP13.26□□□□□ -0.29
RPAIN-204ENST00000405578 SUPT20HQ8NEM7 779 aa13.26□□□□□ -0.29
RPAIN-204ENST00000405578 CLUAP1Q96AJ1 413 aa13.26□□□□□ -0.29
RPAIN-204ENST00000405578 FAM89AQ96GI7 184 aa13.26□□□□□ -0.29
RPAIN-204ENST00000405578 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
RPAIN-204ENST00000405578 TMX4Q9H1E5 349 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-204ENST00000405578 VPS33BQ9H267 617 aa13.26□□□□□ -0.29
RPAIN-204ENST00000405578 GBA2Q9HCG7 927 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-204ENST00000405578 HPS5Q9UPZ3 1129 aa13.26□□□□□ -0.29
RPAIN-204ENST00000405578 ATP6V0A2Q9Y487 856 aa13.26□□□□□ -0.29
RPAIN-204ENST00000405578 ABCC4O15439 1325 aa13.25□□□□□ -0.29
RPAIN-204ENST00000405578 GRM8O00222 908 aa13.25□□□□□ -0.29
RPAIN-204ENST00000405578 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-204ENST00000405578 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-204ENST00000405578 SLC10A5Q5PT55 438 aa13.25□□□□□ -0.29
RPAIN-204ENST00000405578 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
RPAIN-204ENST00000405578 CCDC102AQ96A19 550 aa13.25□□□□□ -0.29
RPAIN-204ENST00000405578 CNOT7Q9UIV1 285 aaKnown RBP13.25□□□□□ -0.29
RPAIN-204ENST00000405578 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 H7C1D1 291 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-204ENST00000405578 TNIP1Q15025 636 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 UBE3BQ7Z3V4 1068 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 KRT26Q7Z3Y9 468 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 C2orf69Q8N8R5 385 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 GCC1Q96CN9 775 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-204ENST00000405578 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
RPAIN-204ENST00000405578 LRRC37AA6NMS7 1700 aa13.24□□□□□ -0.29
RPAIN-204ENST00000405578 ADM5C9JUS6 153 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms