RNA–Protein interactions for RNA: ENST00000405570.5

CTNNB1-204, Transcript of catenin beta 1, human

APPRIS P1 TSL 2 BASIC

Gene CTNNB1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-204	ENST00000405570	ARMCX5	Q6P1M9	558 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	CERS3	Q8IU89	383 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	AOPEP	Q8N6M6	819 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	GOLPH3L	Q9H4A5	285 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ZCCHC17	Q9NP64	241 aa	Known RBP	11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	IMPACT	Q9P2X3	320 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	C1orf167	Q5SNV9	1468 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	SEC31A	O94979	1220 aa	Known RBP	11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ATF3	P18847	181 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	RPS6KB1	P23443	525 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	CEBPZ	Q03701	1054 aa	Known RBP	11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	GORAB	Q5T7V8	394 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	BLOC1S2	Q6QNY1	142 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	KRT28	Q7Z3Y7	464 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	CCAR1	Q8IX12	1150 aa	Known RBP	11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	USHBP1	Q8N6Y0	703 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	UBXN4	Q92575	508 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	FAM227B	Q96M60	508 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ANO10	Q9NW15	660 aa		11.67	□□□□□ -0.54
CTNNB1-204	ENST00000405570	TAF7L	Q5H9L4	462 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	BRF1	Q92994	677 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	RSPH14	Q9UHP6	348 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	CFAP45	Q9UL16	551 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	PXDNL	A1KZ92	1463 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	MARF1	Q9Y4F3	1742 aa	Known RBP	11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	IFIT2	P09913	472 aa	Known RBP	11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	CEP57L1	Q8IYX8	460 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ERCC4	Q92889	916 aa	Predicted RBP	11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	RASSF4	Q9H2L5	321 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ECHDC1	Q9NTX5	307 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	IGSF1	Q8N6C5	1336 aa		11.66	□□□□□ -0.54
CTNNB1-204	ENST00000405570	SASH3	O75995	380 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ADD1	P35611	737 aa	Known RBP	11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ETF1	P62495	437 aa	Known RBP	11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	FBXW7	Q969H0	707 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.65	□□□□□ -0.54	1e-6	■■■□□ 16.3
CTNNB1-204	ENST00000405570	PHAX	Q9H814	394 aa	Known RBP	11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	LCMT1	Q9UIC8	334 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	FAM208A	Q9UK61	1670 aa	Known RBP	11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	TADA3	O75528	432 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	TBC1D8	O95759	1140 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	TUBB4A	P04350	444 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	TNNT3	P45378	269 aa	Predicted RBP	11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	KCNJ6	P48051	423 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	IRX3	P78415	501 aa	Predicted RBP	11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	NMI	Q13287	307 aa	Predicted RBP	11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	ZSCAN26	Q16670	478 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	HSP90AB4P	Q58FF6	505 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	CCDC150	Q8NCX0	1101 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	EVI5L	Q96CN4	794 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	EFCC1	Q9HA90	598 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	DNAI1	Q9UI46	699 aa		11.65	□□□□□ -0.54
CTNNB1-204	ENST00000405570	STRCP1	A6NGW2	1772 aa		11.65	□□□□□ -0.55
CTNNB1-204	ENST00000405570	MYO1C	O00159	1063 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	TRIM66	O15016	1216 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	FANCG	O15287	622 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	ATP8B1	O43520	1251 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	GC	P02774	474 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	SFPQ	P23246	707 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	4e-7	■□□□□ 10.5
CTNNB1-204	ENST00000405570	OAS2	P29728	719 aa	Known RBP	11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	OS9	Q13438	667 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	TMC6	Q7Z403	805 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	HOMER1	Q86YM7	354 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	ENGASE	Q8NFI3	743 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	XPO4	Q9C0E2	1151 aa	Known RBP	11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	RCOR1	Q9UKL0	485 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	LMTK3	Q96Q04	1460 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	RGPD1	P0DJD0	1748 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570		H3BQV1	296 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	KIN	O60870	393 aa	Known RBP	11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	IFFO2	Q5TF58	517 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	CCDC73	Q6ZRK6	1079 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	CLASRP	Q8N2M8	674 aa	Known RBP	11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	CCDC191	Q8NCU4	936 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	IP6K1	Q92551	441 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	PHLPP2	Q6ZVD8	1323 aa		11.64	□□□□□ -0.55
CTNNB1-204	ENST00000405570	FAM160A1	Q05DH4	1040 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	GPS2	Q13227	327 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	TRIM65	Q6PJ69	517 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	C10orf67	Q8IYJ2	551 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	MNS1	Q8NEH6	495 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	NAT10	Q9H0A0	1025 aa	Known RBP	11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	EPC1	Q9H2F5	836 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	IFNK	Q9P0W0	207 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	KDR	P35968	1356 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	MST1R	Q04912	1400 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	EFCAB8	A8MWE9	144 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	SMC2	O95347	1197 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	NOP2	P46087	812 aa	Known RBP	11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	SMC1A	Q14683	1233 aa	Known RBP	11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	REXO1L1P	Q8IX06	675 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	ZFP91	Q96JP5	570 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570	CARD6	Q9BX69	1037 aa		11.63	□□□□□ -0.55
CTNNB1-204	ENST00000405570		A0A0D9SFI3	127 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms