RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
HDAC11-204ENST00000404040 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
HDAC11-204ENST00000404040 DBF4Q9UBU7 674 aaPredicted RBP23.24■■□□□ 1.31
HDAC11-204ENST00000404040 C6orf229H3BNL8 230 aa23.23■■□□□ 1.31
HDAC11-204ENST00000404040 RIMBP2O15034 1052 aa23.23■■□□□ 1.31
HDAC11-204ENST00000404040 GBA2Q9HCG7 927 aaPredicted RBP23.23■■□□□ 1.31
HDAC11-204ENST00000404040 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
HDAC11-204ENST00000404040 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
HDAC11-204ENST00000404040 FAM155AB1AL88 458 aaPredicted RBP23.22■■□□□ 1.31
HDAC11-204ENST00000404040 ADM5C9JUS6 153 aa23.22■■□□□ 1.31
HDAC11-204ENST00000404040 DGKZQ13574 1117 aa23.22■■□□□ 1.31
HDAC11-204ENST00000404040 CCDC184Q52MB2 194 aa23.22■■□□□ 1.31
HDAC11-204ENST00000404040 EYA3Q99504 573 aa23.22■■□□□ 1.31
HDAC11-204ENST00000404040 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
HDAC11-204ENST00000404040 RGMBQ6NW40 437 aa23.21■■□□□ 1.31
HDAC11-204ENST00000404040 TBC1D16Q8TBP0 767 aa23.21■■□□□ 1.31
HDAC11-204ENST00000404040 KCNQ5Q9NR82 932 aa23.21■■□□□ 1.31
HDAC11-204ENST00000404040 ADAMTS8Q9UP79 889 aa23.21■■□□□ 1.31
HDAC11-204ENST00000404040 ZNF609O15014 1411 aa23.21■■□□□ 1.31
HDAC11-204ENST00000404040 TRIM28Q13263 835 aaKnown RBP23.2■■□□□ 1.3
HDAC11-204ENST00000404040 DOK7Q18PE1 504 aa23.2■■□□□ 1.3
HDAC11-204ENST00000404040 KIF4BQ2VIQ3 1234 aa23.2■■□□□ 1.3
HDAC11-204ENST00000404040 RTL5Q5HYW3 569 aaPredicted RBP23.2■■□□□ 1.3
HDAC11-204ENST00000404040 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
HDAC11-204ENST00000404040 HYPKQ9NX55 129 aa23.2■■□□□ 1.3
HDAC11-204ENST00000404040 PAPPA2Q9BXP8 1791 aa23.19■■□□□ 1.3
HDAC11-204ENST00000404040 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
HDAC11-204ENST00000404040 MIER1Q8N108 512 aa23.19■■□□□ 1.3
HDAC11-204ENST00000404040 C2orf69Q8N8R5 385 aa23.19■■□□□ 1.3
HDAC11-204ENST00000404040 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
HDAC11-204ENST00000404040 CFAP44Q96MT7 982 aa23.19■■□□□ 1.3
HDAC11-204ENST00000404040 SAGE1Q9NXZ1 904 aa23.19■■□□□ 1.3
HDAC11-204ENST00000404040 RPS8P62241 208 aaKnown RBP23.18■■□□□ 1.3
HDAC11-204ENST00000404040 RBM26Q5T8P6 1007 aaKnown RBP23.18■■□□□ 1.3
HDAC11-204ENST00000404040 CCDC102AQ96A19 550 aa23.18■■□□□ 1.3
HDAC11-204ENST00000404040 GGA3Q9NZ52 723 aa23.18■■□□□ 1.3
HDAC11-204ENST00000404040 PODXL2Q9NZ53 605 aa23.17■■□□□ 1.3
HDAC11-204ENST00000404040 VIL1P09327 827 aaKnown RBP23.16■■□□□ 1.3
HDAC11-204ENST00000404040 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
HDAC11-204ENST00000404040 UFL1O94874 794 aa23.15■■□□□ 1.3
HDAC11-204ENST00000404040 ZNF157P51786 506 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-204ENST00000404040 KIF23Q02241 960 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-204ENST00000404040 SULF1Q8IWU6 871 aa23.15■■□□□ 1.3
HDAC11-204ENST00000404040 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
HDAC11-204ENST00000404040 ZC3H12CQ9C0D7 883 aaKnown RBP23.15■■□□□ 1.3
HDAC11-204ENST00000404040 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
HDAC11-204ENST00000404040 SLC10A3P09131 477 aa23.14■■□□□ 1.29
HDAC11-204ENST00000404040 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.29
HDAC11-204ENST00000404040 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
HDAC11-204ENST00000404040 CDCA5Q96FF9 252 aa23.13■■□□□ 1.29
HDAC11-204ENST00000404040 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
HDAC11-204ENST00000404040 ANKIB1Q9P2G1 1089 aa23.13■■□□□ 1.29
HDAC11-204ENST00000404040 GGA1Q9UJY5 639 aa23.13■■□□□ 1.29
HDAC11-204ENST00000404040 HSP90B1P14625 803 aaKnown RBP23.12■■□□□ 1.29
HDAC11-204ENST00000404040 ZNF280AP59817 542 aaPredicted RBP23.12■■□□□ 1.29
HDAC11-204ENST00000404040 RIC3Q7Z5B4 369 aa23.12■■□□□ 1.29
HDAC11-204ENST00000404040 RNF186Q9NXI6 227 aa23.12■■□□□ 1.29
HDAC11-204ENST00000404040 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
HDAC11-204ENST00000404040 G3V3G9 751 aa23.1■■□□□ 1.29
HDAC11-204ENST00000404040 TRPA1O75762 1119 aa23.1■■□□□ 1.29
HDAC11-204ENST00000404040 CCDC152Q4G0S7 254 aa23.1■■□□□ 1.29
HDAC11-204ENST00000404040 DCAF8Q5TAQ9 597 aa23.1■■□□□ 1.29
HDAC11-204ENST00000404040 RSBN1LQ6PCB5 846 aaPredicted RBP23.1■■□□□ 1.29
HDAC11-204ENST00000404040 AGBL3Q8NEM8 1001 aa23.1■■□□□ 1.29
HDAC11-204ENST00000404040 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
HDAC11-204ENST00000404040 ANGEL2Q5VTE6 544 aaKnown RBP23.09■■□□□ 1.29
HDAC11-204ENST00000404040 MYD88Q99836 296 aa23.09■■□□□ 1.29
HDAC11-204ENST00000404040 PHAXQ9H814 394 aaKnown RBP23.09■■□□□ 1.29
HDAC11-204ENST00000404040 ZNF853P0CG23 659 aa23.08■■□□□ 1.29
HDAC11-204ENST00000404040 RASAL3Q86YV0 1011 aa23.08■■□□□ 1.29
HDAC11-204ENST00000404040 CCDC191Q8NCU4 936 aa23.08■■□□□ 1.29
HDAC11-204ENST00000404040 CSRNP1Q96S65 589 aa23.08■■□□□ 1.29
HDAC11-204ENST00000404040 XDHP47989 1333 aa23.08■■□□□ 1.28
HDAC11-204ENST00000404040 PDE8AO60658 829 aa23.07■■□□□ 1.28
HDAC11-204ENST00000404040 SCARF1Q14162 830 aa23.07■■□□□ 1.28
HDAC11-204ENST00000404040 GMLQ99445 158 aa23.07■■□□□ 1.28
HDAC11-204ENST00000404040 PITPNM2Q9BZ72 1349 aa23.07■■□□□ 1.28
HDAC11-204ENST00000404040 FKBP1BP68106 108 aa23.06■■□□□ 1.28
HDAC11-204ENST00000404040 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
HDAC11-204ENST00000404040 IFT57Q9NWB7 429 aa23.06■■□□□ 1.28
HDAC11-204ENST00000404040 CWC25Q9NXE8 425 aaPredicted RBP23.06■■□□□ 1.28
HDAC11-204ENST00000404040 USP17L8P0C7I0 530 aa23.05■■□□□ 1.28
HDAC11-204ENST00000404040 ANKRD18AQ8IVF6 992 aa23.05■■□□□ 1.28
HDAC11-204ENST00000404040 REM2Q8IYK8 340 aaPredicted RBP23.05■■□□□ 1.28
HDAC11-204ENST00000404040 MYOZ2Q9NPC6 264 aa23.05■■□□□ 1.28
HDAC11-204ENST00000404040 ECM29Q5VYK3 1845 aa23.04■■□□□ 1.28
HDAC11-204ENST00000404040 SOX10P56693 466 aa23.04■■□□□ 1.28
HDAC11-204ENST00000404040 NCBP3Q53F19 620 aaKnown RBP23.04■■□□□ 1.28
HDAC11-204ENST00000404040 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
HDAC11-204ENST00000404040 MED23Q9ULK4 1368 aa23.03■■□□□ 1.28
HDAC11-204ENST00000404040 USP17L3A6NCW0 530 aa23.03■■□□□ 1.28
HDAC11-204ENST00000404040 USP17L4A6NCW7 530 aa23.03■■□□□ 1.28
HDAC11-204ENST00000404040 ATP2B4P23634 1241 aa23.03■■□□□ 1.28
HDAC11-204ENST00000404040 USP17L1Q7RTZ2 530 aa23.03■■□□□ 1.28
HDAC11-204ENST00000404040 CTU1Q7Z7A3 348 aaKnown RBP23.03■■□□□ 1.28
HDAC11-204ENST00000404040 METTL22Q9BUU2 404 aaPredicted RBP23.03■■□□□ 1.28
HDAC11-204ENST00000404040 A0A1B0GUL6 1792 aa23.03■■□□□ 1.28
HDAC11-204ENST00000404040 LAMB1P07942 1786 aa23.03■■□□□ 1.28
HDAC11-204ENST00000404040 CACNA1FO60840 1977 aa23.02■■□□□ 1.28
HDAC11-204ENST00000404040 ELL2O00472 640 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms