RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MYH16Q9H6N6 1097 aa19.66■□□□□ 0.74
TPM1-207ENST00000403994 ZNF646O15015 1829 aaPredicted RBP19.66■□□□□ 0.74
TPM1-207ENST00000403994 RIMBP2O15034 1052 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 ECE2O60344 883 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 ANKRD18AQ8IVF6 992 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 TTLL11Q8NHH1 800 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 DNAAF4Q8WXU2 420 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 BCL2L13Q9BXK5 485 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 ANKIB1Q9P2G1 1089 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 ZNF521Q96K83 1311 aa19.65■□□□□ 0.74
TPM1-207ENST00000403994 PSMD14O00487 310 aa19.64■□□□□ 0.73
TPM1-207ENST00000403994 GCKRQ14397 625 aa19.64■□□□□ 0.73
TPM1-207ENST00000403994 CDC5LQ99459 802 aaKnown RBP19.64■□□□□ 0.73
TPM1-207ENST00000403994 GREM2Q9H772 168 aa19.64■□□□□ 0.73
TPM1-207ENST00000403994 GGA1Q9UJY5 639 aa19.64■□□□□ 0.73
TPM1-207ENST00000403994 XDHP47989 1333 aa19.63■□□□□ 0.73
TPM1-207ENST00000403994 SHTN1A0MZ66 631 aa19.63■□□□□ 0.73
TPM1-207ENST00000403994 H7C1W4 665 aa19.63■□□□□ 0.73
TPM1-207ENST00000403994 TRPM4Q8TD43 1214 aa19.63■□□□□ 0.73
TPM1-207ENST00000403994 HSPA1AP0DMV8 641 aaKnown RBP19.62■□□□□ 0.73
TPM1-207ENST00000403994 HSPA1BP0DMV9 641 aaKnown RBP19.62■□□□□ 0.73
TPM1-207ENST00000403994 CASP7P55210 303 aa19.62■□□□□ 0.73
TPM1-207ENST00000403994 DOK7Q18PE1 504 aa19.62■□□□□ 0.73
TPM1-207ENST00000403994 MICALL2Q8IY33 904 aa19.62■□□□□ 0.73
TPM1-207ENST00000403994 LINS1Q8NG48 757 aa19.62■□□□□ 0.73
TPM1-207ENST00000403994 ZNF609O15014 1411 aa19.61■□□□□ 0.73
TPM1-207ENST00000403994 FMR1Q06787 632 aaKnown RBP eCLIP19.61■□□□□ 0.73
TPM1-207ENST00000403994 PLA2G12BQ9BX93 195 aa19.61■□□□□ 0.73
TPM1-207ENST00000403994 ZBTB12Q9Y330 459 aaPredicted RBP19.61■□□□□ 0.73
TPM1-207ENST00000403994 RASSF10A6NK89 507 aa19.6■□□□□ 0.73
TPM1-207ENST00000403994 TRAF5O00463 557 aa19.6■□□□□ 0.73
TPM1-207ENST00000403994 FAM161AQ3B820 660 aa19.6■□□□□ 0.73
TPM1-207ENST00000403994 IFFO2Q5TF58 517 aa19.6■□□□□ 0.73
TPM1-207ENST00000403994 ZC3H12CQ9C0D7 883 aaKnown RBP19.6■□□□□ 0.73
TPM1-207ENST00000403994 KCNQ5Q9NR82 932 aa19.6■□□□□ 0.73
TPM1-207ENST00000403994 CNOT7Q9UIV1 285 aaKnown RBP19.6■□□□□ 0.73
TPM1-207ENST00000403994 F6X3S4 739 aa19.59■□□□□ 0.73
TPM1-207ENST00000403994 RPS12P25398 132 aaKnown RBP19.59■□□□□ 0.73
TPM1-207ENST00000403994 VEGFBP49765 207 aa19.59■□□□□ 0.73
TPM1-207ENST00000403994 HIRAP54198 1017 aaPredicted RBP19.59■□□□□ 0.73
TPM1-207ENST00000403994 DPF2Q92785 391 aa19.59■□□□□ 0.73
TPM1-207ENST00000403994 BSDC1Q9NW68 430 aaPredicted RBP19.59■□□□□ 0.73
TPM1-207ENST00000403994 MED23Q9ULK4 1368 aa19.58■□□□□ 0.73
TPM1-207ENST00000403994 PGAP2Q9UHJ9 254 aa19.58■□□□□ 0.72
TPM1-207ENST00000403994 ABT1Q9ULW3 272 aaKnown RBP19.58■□□□□ 0.72
TPM1-207ENST00000403994 H7C1D1 291 aa19.57■□□□□ 0.72
TPM1-207ENST00000403994 ITGA6P23229 1130 aa19.57■□□□□ 0.72
TPM1-207ENST00000403994 ATP2B4P23634 1241 aa19.57■□□□□ 0.72
TPM1-207ENST00000403994 BEND3Q5T5X7 828 aa19.57■□□□□ 0.72
TPM1-207ENST00000403994 ZC3H15Q8WU90 426 aaKnown RBP19.57■□□□□ 0.72
TPM1-207ENST00000403994 GLIS2Q9BZE0 524 aaPredicted RBP19.57■□□□□ 0.72
TPM1-207ENST00000403994 MINPP1Q9UNW1 487 aa19.57■□□□□ 0.72
TPM1-207ENST00000403994 EGFRP00533 1210 aa19.56■□□□□ 0.72
TPM1-207ENST00000403994 CST9Q5W186 159 aa19.56■□□□□ 0.72
TPM1-207ENST00000403994 WTIPA6NIX2 430 aaPredicted RBP19.55■□□□□ 0.72
TPM1-207ENST00000403994 G3V3G9 751 aa19.55■□□□□ 0.72
TPM1-207ENST00000403994 CSF1RP07333 972 aa19.55■□□□□ 0.72
TPM1-207ENST00000403994 VIL1P09327 827 aaKnown RBP19.55■□□□□ 0.72
TPM1-207ENST00000403994 IGHMBP2P38935 993 aaKnown RBP19.55■□□□□ 0.72
TPM1-207ENST00000403994 DCAF8Q5TAQ9 597 aa19.55■□□□□ 0.72
TPM1-207ENST00000403994 COL13A1Q5TAT6 717 aaPredicted RBP19.55■□□□□ 0.72
TPM1-207ENST00000403994 SAMD7Q7Z3H4 446 aa19.55■□□□□ 0.72
TPM1-207ENST00000403994 POLR2AP24928 1970 aaKnown RBP19.55■□□□□ 0.72
TPM1-207ENST00000403994 CCT4P50991 539 aaKnown RBP19.54■□□□□ 0.72
TPM1-207ENST00000403994 DEFB115Q30KQ5 88 aa19.54■□□□□ 0.72
TPM1-207ENST00000403994 TBC1D10BQ4KMP7 808 aaPredicted RBP19.54■□□□□ 0.72
TPM1-207ENST00000403994 TLL2Q9Y6L7 1015 aa19.53■□□□□ 0.72
TPM1-207ENST00000403994 CELF2O95319 508 aaKnown RBP19.52■□□□□ 0.72
TPM1-207ENST00000403994 FOXO4P98177 505 aa19.52■□□□□ 0.72
TPM1-207ENST00000403994 KIF4BQ2VIQ3 1234 aa19.52■□□□□ 0.72
TPM1-207ENST00000403994 RSBN1LQ6PCB5 846 aaPredicted RBP19.52■□□□□ 0.72
TPM1-207ENST00000403994 WDR33Q9C0J8 1336 aaKnown RBP19.51■□□□□ 0.71
TPM1-207ENST00000403994 E9PSI1 815 aa19.51■□□□□ 0.71
TPM1-207ENST00000403994 GRM8O00222 908 aa19.51■□□□□ 0.71
TPM1-207ENST00000403994 CDC37L1Q7L3B6 337 aa19.51■□□□□ 0.71
TPM1-207ENST00000403994 PODNQ7Z5L7 613 aa19.51■□□□□ 0.71
TPM1-207ENST00000403994 AGBL3Q8NEM8 1001 aa19.51■□□□□ 0.71
TPM1-207ENST00000403994 MPHOSPH8Q99549 860 aa19.51■□□□□ 0.71
TPM1-207ENST00000403994 ANKRD18BA2A2Z9 1011 aa19.5■□□□□ 0.71
TPM1-207ENST00000403994 FOXN1O15353 648 aa19.5■□□□□ 0.71
TPM1-207ENST00000403994 KLRK1P26718 216 aa19.5■□□□□ 0.71
TPM1-207ENST00000403994 ZNF280AP59817 542 aaPredicted RBP19.5■□□□□ 0.71
TPM1-207ENST00000403994 CAPNS2Q96L46 248 aa19.5■□□□□ 0.71
TPM1-207ENST00000403994 GMLQ99445 158 aa19.5■□□□□ 0.71
TPM1-207ENST00000403994 LEMD3Q9Y2U8 911 aa19.5■□□□□ 0.71
TPM1-207ENST00000403994 USP17L3A6NCW0 530 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 USP17L4A6NCW7 530 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 ALDH1L1O75891 902 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 EPHA10Q5JZY3 1008 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 SLC4A10Q6U841 1118 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
TPM1-207ENST00000403994 USP17L1Q7RTZ2 530 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 SAPCD2Q86UD0 394 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 TXNRD3Q86VQ6 643 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 ANKRD2Q9GZV1 360 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 ZNF408Q9H9D4 720 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 GGA3Q9NZ52 723 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 CHMP3Q9Y3E7 222 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 ZNF804BA4D1E1 1349 aa19.49■□□□□ 0.71
TPM1-207ENST00000403994 CHRNDQ07001 517 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms