RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
VPREB1-202ENST00000403807 CNNM1Q9NRU3 951 aa17.11■□□□□ 0.33
VPREB1-202ENST00000403807 TAF1P21675 1872 aa17.1■□□□□ 0.33
VPREB1-202ENST00000403807 C6orf229H3BNL8 230 aa17.1■□□□□ 0.33
VPREB1-202ENST00000403807 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
VPREB1-202ENST00000403807 C20orf194Q5TEA3 1177 aa17.1■□□□□ 0.33
VPREB1-202ENST00000403807 EYA3Q99504 573 aa17.1■□□□□ 0.33
VPREB1-202ENST00000403807 GGA1Q9UJY5 639 aa17.1■□□□□ 0.33
VPREB1-202ENST00000403807 XDHP47989 1333 aa17.1■□□□□ 0.33
VPREB1-202ENST00000403807 PRELPP51888 382 aa17.09■□□□□ 0.33
VPREB1-202ENST00000403807 JDP2Q8WYK2 163 aa17.09■□□□□ 0.33
VPREB1-202ENST00000403807 POLLQ9UGP5 575 aa17.09■□□□□ 0.33
VPREB1-202ENST00000403807 SNED1Q8TER0 1413 aa17.09■□□□□ 0.33
VPREB1-202ENST00000403807 CHD4Q14839 1912 aa17.08■□□□□ 0.33
VPREB1-202ENST00000403807 FER1L6Q2WGJ9 1857 aa17.08■□□□□ 0.33
VPREB1-202ENST00000403807 SRGAP3O43295 1099 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
VPREB1-202ENST00000403807 CHRNDQ07001 517 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 MTX1Q13505 466 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 LARGE2Q8N3Y3 721 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 TBC1D16Q8TBP0 767 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 LEMD3Q9Y2U8 911 aa17.08■□□□□ 0.32
VPREB1-202ENST00000403807 COL4A1P02462 1669 aa17.07■□□□□ 0.32
VPREB1-202ENST00000403807 UFL1O94874 794 aa17.07■□□□□ 0.32
VPREB1-202ENST00000403807 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
VPREB1-202ENST00000403807 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
VPREB1-202ENST00000403807 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
VPREB1-202ENST00000403807 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
VPREB1-202ENST00000403807 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
VPREB1-202ENST00000403807 FBXO3Q9UK99 471 aa17.07■□□□□ 0.32
VPREB1-202ENST00000403807 MROH5Q6ZUA9 1318 aa17.06■□□□□ 0.32
VPREB1-202ENST00000403807 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
VPREB1-202ENST00000403807 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
VPREB1-202ENST00000403807 AOC3Q16853 763 aa17.06■□□□□ 0.32
VPREB1-202ENST00000403807 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
VPREB1-202ENST00000403807 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
VPREB1-202ENST00000403807 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
VPREB1-202ENST00000403807 EYA2O00167 538 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 KCNJ4P48050 445 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 LRRC24Q50LG9 513 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 DPY19L2Q6NUT2 758 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 HELBQ8NG08 1087 aaPredicted RBP17.05■□□□□ 0.32
VPREB1-202ENST00000403807 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
VPREB1-202ENST00000403807 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
VPREB1-202ENST00000403807 ZNF804BA4D1E1 1349 aa17.04■□□□□ 0.32
VPREB1-202ENST00000403807 G3V3G9 751 aa17.04■□□□□ 0.32
VPREB1-202ENST00000403807 TAF5LO75529 589 aa17.04■□□□□ 0.32
VPREB1-202ENST00000403807 METTL24Q5JXM2 366 aa17.04■□□□□ 0.32
VPREB1-202ENST00000403807 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
VPREB1-202ENST00000403807 PNMA6EA0A0J9YXQ4 647 aa17.03■□□□□ 0.32
VPREB1-202ENST00000403807 FZD9O00144 591 aa17.03■□□□□ 0.32
VPREB1-202ENST00000403807 CIAO1O76071 339 aa17.03■□□□□ 0.32
VPREB1-202ENST00000403807 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
VPREB1-202ENST00000403807 SIL1Q9H173 461 aa17.03■□□□□ 0.32
VPREB1-202ENST00000403807 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
VPREB1-202ENST00000403807 LRRC37AA6NMS7 1700 aa17.03■□□□□ 0.32
VPREB1-202ENST00000403807 SBF1O95248 1867 aa17.03■□□□□ 0.32
VPREB1-202ENST00000403807 IL15P40933 162 aaPredicted RBP17.02■□□□□ 0.32
VPREB1-202ENST00000403807 EIF6P56537 245 aaKnown RBP17.02■□□□□ 0.32
VPREB1-202ENST00000403807 UBE4AQ14139 1066 aa17.02■□□□□ 0.32
VPREB1-202ENST00000403807 POLA2Q14181 598 aa17.02■□□□□ 0.32
VPREB1-202ENST00000403807 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
VPREB1-202ENST00000403807 SSH3Q8TE77 659 aa17.02■□□□□ 0.32
VPREB1-202ENST00000403807 GPR101Q96P66 508 aaPredicted RBP17.02■□□□□ 0.32
VPREB1-202ENST00000403807 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
VPREB1-202ENST00000403807 WTIPA6NIX2 430 aaPredicted RBP17.01■□□□□ 0.31
VPREB1-202ENST00000403807 PDE8BO95263 885 aa17.01■□□□□ 0.31
VPREB1-202ENST00000403807 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.31
VPREB1-202ENST00000403807 ATG9AQ7Z3C6 839 aa17.01■□□□□ 0.31
VPREB1-202ENST00000403807 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
VPREB1-202ENST00000403807 GLTPD2A6NH11 291 aa17■□□□□ 0.31
VPREB1-202ENST00000403807 DOK7Q18PE1 504 aa17■□□□□ 0.31
VPREB1-202ENST00000403807 MED23Q9ULK4 1368 aa17■□□□□ 0.31
VPREB1-202ENST00000403807 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
VPREB1-202ENST00000403807 SNAP23O00161 211 aa16.99■□□□□ 0.31
VPREB1-202ENST00000403807 HMMRO75330 724 aa16.99■□□□□ 0.31
VPREB1-202ENST00000403807 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
VPREB1-202ENST00000403807 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
VPREB1-202ENST00000403807 DBNDD1Q9H9R9 158 aa16.99■□□□□ 0.31
VPREB1-202ENST00000403807 CCDC88AQ3V6T2 1871 aa16.99■□□□□ 0.31
VPREB1-202ENST00000403807 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
VPREB1-202ENST00000403807 ECE2O60344 883 aa16.98■□□□□ 0.31
VPREB1-202ENST00000403807 SURF6O75683 361 aaKnown RBP16.98■□□□□ 0.31
VPREB1-202ENST00000403807 PODNQ7Z5L7 613 aa16.98■□□□□ 0.31
VPREB1-202ENST00000403807 VGLL2Q8N8G2 317 aa16.98■□□□□ 0.31
VPREB1-202ENST00000403807 ZNF526Q8TF50 670 aaPredicted RBP16.98■□□□□ 0.31
VPREB1-202ENST00000403807 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
VPREB1-202ENST00000403807 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
VPREB1-202ENST00000403807 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
VPREB1-202ENST00000403807 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
VPREB1-202ENST00000403807 TNIP1Q15025 636 aa16.97■□□□□ 0.31
VPREB1-202ENST00000403807 PUM3Q15397 648 aaKnown RBP16.97■□□□□ 0.31
VPREB1-202ENST00000403807 TXNRD3Q86VQ6 643 aa16.97■□□□□ 0.31
VPREB1-202ENST00000403807 GPBP1L1Q9HC44 474 aaPredicted RBP16.97■□□□□ 0.31
VPREB1-202ENST00000403807 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms