RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 METTL16Q86W50 562 aaKnown RBP6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 CNTNAP3BQ96NU0 1288 aa6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 CNTNAP3Q9BZ76 1288 aa6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 EHD4Q9H223 541 aa6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 TLR7Q9NYK1 1049 aaKnown RBP6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 SALL4Q9UJQ4 1053 aa6.3□□□□□ -1.4
HMGB1P17-201ENST00000403495 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 ZBTB42B2RXF5 422 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 PSAPP07602 524 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 PCBP4P57723 403 aaKnown RBP6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 LAMC2Q13753 1193 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 NCAPG2Q86XI2 1143 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 NT5DC4Q86YG4 428 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 CRELD1Q96HD1 420 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 ZKSCAN3Q9BRR0 538 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 SUV39H2Q9H5I1 410 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
HMGB1P17-201ENST00000403495 F6X3S4 739 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 FBXO24O75426 580 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 ZNF76P36508 570 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 FCGRTP55899 365 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 SV2AQ7L0J3 742 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 SYT9Q86SS6 491 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 GPR161Q8N6U8 529 aaKnown RBP6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 GLIS3Q8NEA6 775 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 TRERF1Q96PN7 1200 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 OSMRQ99650 979 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 PCDHGB7Q9Y5F8 929 aa6.28□□□□□ -1.4
HMGB1P17-201ENST00000403495 BMP4P12644 408 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 EDN3P14138 238 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 ATP11AP98196 1134 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 HYAL2Q12891 473 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 GAS6Q14393 721 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 ZNF394Q53GI3 561 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 KIAA0319Q5VV43 1072 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 RNF34Q969K3 372 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 PMEPA1Q969W9 287 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 FRMD6Q96NE9 622 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 UBE2OQ9C0C9 1292 aaKnown RBP6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 LIN7BQ9HAP6 207 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 C11orf16Q9NQ32 467 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 USP35Q9P2H5 1018 aa6.27□□□□□ -1.41
HMGB1P17-201ENST00000403495 KIF4AO95239 1232 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 MAP3K6O95382 1288 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 PLAURQ03405 335 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 SPRED3Q2MJR0 410 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 ADAMTSL4Q6UY14 1074 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 CEP120Q8N960 986 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 GMCL1Q96IK5 515 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 TCF12Q99081 682 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 TRIM56Q9BRZ2 755 aaKnown RBP6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 OXCT2Q9BYC2 517 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 RASSF4Q9H2L5 321 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 ABCB6Q9NP58 842 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 DNAJB12Q9NXW2 375 aaKnown RBP6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 FAM8A1Q9UBU6 413 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 KLF15Q9UIH9 416 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 PHF24Q9UPV7 400 aa6.26□□□□□ -1.41
HMGB1P17-201ENST00000403495 CPB1P15086 417 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 GRIA4P48058 902 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 TNNI2P48788 182 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 FAM182BQ5T319 152 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 FOXR1Q6PIV2 292 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 C3orf58Q8NDZ4 430 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 ACBD3Q9H3P7 528 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 DZANK1Q9NVP4 752 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 TTF2Q9UNY4 1162 aaKnown RBP6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 AKAP2Q9Y2D5 859 aa6.25□□□□□ -1.41
HMGB1P17-201ENST00000403495 LOC102724428A0A0B4J2F2 783 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 GIPC1O14908 333 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 EIF2AK2P19525 551 aaKnown RBP6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 MX2P20592 715 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 SOX18P35713 384 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 NRLP54845 237 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 SIK1P57059 783 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 TAF1CQ15572 869 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 NAALADL2Q58DX5 795 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 ZNF468Q5VIY5 522 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 ASAP3Q8TDY4 903 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 NAGPAQ9UK23 515 aa6.24□□□□□ -1.41
HMGB1P17-201ENST00000403495 USP31Q70CQ4 1352 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 NFKBIEO00221 500 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 GSTT1P30711 240 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 RACK1P63244 317 aaKnown RBP6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 GPLD1P80108 840 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 NEUROD1Q13562 356 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 RNFT1Q5M7Z0 435 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 DTHD1Q6ZMT9 781 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 CCNJLQ8IV13 435 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 TRPM4Q8TD43 1214 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 NANOS1Q8WY41 292 aaKnown RBP6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 SPACA7Q96KW9 195 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 METTL5Q9NRN9 209 aaKnown RBP6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 GGT7Q9UJ14 662 aa6.23□□□□□ -1.41
HMGB1P17-201ENST00000403495 NEURL1BA8MQ27 555 aa6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 ZNF157P51786 506 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms