RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 NUP188Q5SRE5 1749 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 PALLDQ8WX93 1383 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 LRP6O75581 1613 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 STX6O43752 255 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 TAF5LO75529 589 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 PCCAP05165 728 aaPredicted RBP11.1□□□□□ -0.63
CBX1-203ENST00000402583 RPS6KB1P23443 525 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 ATG9AQ7Z3C6 839 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 PLA2G12BQ9BX93 195 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
CBX1-203ENST00000402583 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 HAX1O00165 279 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 EXOC5O00471 708 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
CBX1-203ENST00000402583 NASPP49321 788 aaPredicted RBP11.09□□□□□ -0.63
CBX1-203ENST00000402583 CCDC173Q0VFZ6 552 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
CBX1-203ENST00000402583 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 CCDC158Q5M9N0 1113 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 FOXD4L5Q5VV16 416 aaPredicted RBP11.09□□□□□ -0.63
CBX1-203ENST00000402583 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 DNAJC10Q8IXB1 793 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 ZBTB38Q8NAP3 1195 aaPredicted RBP11.09□□□□□ -0.63
CBX1-203ENST00000402583 TMEM87AQ8NBN3 555 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 GPT2Q8TD30 523 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 FOXD4L4Q8WXT5 416 aaPredicted RBP11.09□□□□□ -0.63
CBX1-203ENST00000402583 PIGBQ92521 554 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 CHMP4CQ96CF2 233 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 TRIM44Q96DX7 344 aaPredicted RBP11.09□□□□□ -0.63
CBX1-203ENST00000402583 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 ZNF609O15014 1411 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 CDHR2Q9BYE9 1310 aa11.09□□□□□ -0.63
CBX1-203ENST00000402583 LETM1O95202 739 aaPredicted RBP11.08□□□□□ -0.64
CBX1-203ENST00000402583 F13A1P00488 732 aa11.08□□□□□ -0.64
CBX1-203ENST00000402583 IFIT1P09914 478 aaKnown RBP11.08□□□□□ -0.64
CBX1-203ENST00000402583 SYT1P21579 422 aa11.08□□□□□ -0.64
CBX1-203ENST00000402583 GJB2P29033 226 aa11.08□□□□□ -0.64
CBX1-203ENST00000402583 GORABQ5T7V8 394 aa11.08□□□□□ -0.64
CBX1-203ENST00000402583 GIGYF2Q6Y7W6 1299 aaKnown RBP11.08□□□□□ -0.64
CBX1-203ENST00000402583 GAS2L3Q86XJ1 694 aa11.08□□□□□ -0.64
CBX1-203ENST00000402583 CCDC83Q8IWF9 413 aa11.08□□□□□ -0.64
CBX1-203ENST00000402583 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
CBX1-203ENST00000402583 TJP1Q07157 1748 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 ABCC12Q96J65 1359 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 AHDC1Q5TGY3 1603 aaPredicted RBP11.07□□□□□ -0.64
CBX1-203ENST00000402583 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
CBX1-203ENST00000402583 CPA1P15085 419 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
CBX1-203ENST00000402583 TTC39AQ5SRH9 613 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 LRSAM1Q6UWE0 723 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 NEK1Q96PY6 1258 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 DSCC1Q9BVC3 393 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 PANK2Q9BZ23 570 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
CBX1-203ENST00000402583 ASAP1Q9ULH1 1129 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 BCL9O00512 1426 aa11.07□□□□□ -0.64
CBX1-203ENST00000402583 TOGARAM1Q9Y4F4 1720 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 COL22A1Q8NFW1 1626 aaPredicted RBP11.06□□□□□ -0.64
CBX1-203ENST00000402583 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 A0A1B0GUL7 405 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 ERVV-1B6SEH8 477 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 GOLIM4O00461 696 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
CBX1-203ENST00000402583 CSF1RP07333 972 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 ME3Q16798 604 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
CBX1-203ENST00000402583 ZNF589Q86UQ0 364 aaPredicted RBP11.06□□□□□ -0.64
CBX1-203ENST00000402583 USP48Q86UV5 1035 aa11.06□□□□□ -0.64
CBX1-203ENST00000402583 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
CBX1-203ENST00000402583 SPEF2Q9C093 1822 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 LARGE1O95461 756 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
CBX1-203ENST00000402583 TIMM10P62072 90 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 UBE2HP62256 183 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 ZMYM1Q5SVZ6 1142 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
CBX1-203ENST00000402583 AK7Q96M32 723 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 TPCN1Q9ULQ1 816 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
CBX1-203ENST00000402583 ANKRD18BA2A2Z9 1011 aa11.04□□□□□ -0.64
CBX1-203ENST00000402583 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
CBX1-203ENST00000402583 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
CBX1-203ENST00000402583 PSEN1P49768 467 aa11.04□□□□□ -0.64
CBX1-203ENST00000402583 FGD1P98174 961 aa11.04□□□□□ -0.64
CBX1-203ENST00000402583 LARP1BQ659C4 914 aaKnown RBP11.04□□□□□ -0.64
CBX1-203ENST00000402583 ZSCAN25Q6NSZ9 544 aa11.04□□□□□ -0.64
CBX1-203ENST00000402583 NLRP10Q86W26 655 aa11.04□□□□□ -0.64
CBX1-203ENST00000402583 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
CBX1-203ENST00000402583 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
CBX1-203ENST00000402583 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
CBX1-203ENST00000402583 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
CBX1-203ENST00000402583 TMEM63CQ9P1W3 806 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms