RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 PHLDB3Q6NSJ2 640 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 PHTF2Q8N3S3 785 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 CYP27B1O15528 508 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 PHKG2P15735 406 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 NCOA4Q13772 614 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 TAF7Q15545 349 aaPredicted RBP12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 MSS51Q4VC12 460 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 ZCRB1Q8TBF4 217 aaKnown RBP12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 OCSTAMPQ9BR26 566 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 TSR3Q9UJK0 312 aaKnown RBP12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 LAS1LQ9Y4W2 734 aaKnown RBP12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 PARP4Q9UKK3 1724 aaKnown RBP12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 ATP5J2-PTCD1G3V325 749 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 LZTS3O60299 673 aaPredicted RBP12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 BCAMP50895 628 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 KCNH2Q12809 1159 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 PTK7Q13308 1070 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 PCDHB9Q9Y5E1 797 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 DISP2A7MBM2 1401 aa12.36□□□□□ -0.43
PRAMEF1-202ENST00000400814 SPATA31A1Q5TZJ5 1347 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 LRP6O75581 1613 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 VAMP4O75379 141 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 DXOO77932 396 aaKnown RBP12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 RASA1P20936 1047 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 SSFA2P28290 1259 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 RARSP54136 660 aaKnown RBP12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 MPRIPQ6WCQ1 1025 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 PLPP7Q8NBV4 271 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
PRAMEF1-202ENST00000400814 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 SPATA31A5Q5VU36 1347 aa12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 SPATA31A7Q8IWB4 1347 aa12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 RRP1P56182 461 aaKnown RBP12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 FAM160A2Q8N612 972 aaPredicted RBP12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 FAM200AQ8TCP9 573 aa12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP35Q9P2H5 1018 aa12.34□□□□□ -0.43
PRAMEF1-202ENST00000400814 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 BCAR3O75815 825 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 ARID4AP29374 1257 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 VPS72Q15906 364 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 TSPYL6Q8N831 410 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 C8orf58Q8NAV2 365 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 C8orf37Q96NL8 207 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 TSPYL4Q9UJ04 414 aa12.33□□□□□ -0.44
PRAMEF1-202ENST00000400814 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 KDM6AO15550 1401 aaPredicted RBP12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 NEFLP07196 543 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 MMP16P51512 607 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 TEFQ10587 303 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 ANKMY2Q8IV38 441 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 CLP1Q92989 425 aaKnown RBP12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
PRAMEF1-202ENST00000400814 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
PRAMEF1-202ENST00000400814 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF1-202ENST00000400814 MAP7D1Q3KQU3 841 aa12.31□□□□□ -0.44
PRAMEF1-202ENST00000400814 SPSB2Q99619 263 aa12.31□□□□□ -0.44
PRAMEF1-202ENST00000400814 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
PRAMEF1-202ENST00000400814 EXOC5O00471 708 aa12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 EML3Q32P44 896 aa12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 ADAM32Q8TC27 787 aa12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 USP21Q9UK80 565 aa12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 SOS1Q07889 1333 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 SIPA1L3O60292 1781 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
PRAMEF1-202ENST00000400814 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 PLIN1O60240 522 aa12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 EIF4A1P60842 406 aaKnown RBP12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 DDX54Q8TDD1 881 aaKnown RBP12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 ARHGAP9Q9BRR9 750 aa12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 MRC1P22897 1456 aa12.29□□□□□ -0.44
PRAMEF1-202ENST00000400814 ELL2O00472 640 aaPredicted RBP12.28□□□□□ -0.44
PRAMEF1-202ENST00000400814 KRT24Q2M2I5 525 aa12.28□□□□□ -0.44
PRAMEF1-202ENST00000400814 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms