RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 TBC1D16Q8TBP0 767 aa15.5■□□□□ 0.07
LINC00544-201ENST00000400540 DPF2Q92785 391 aa15.5■□□□□ 0.07
LINC00544-201ENST00000400540 PHAXQ9H814 394 aaKnown RBP15.5■□□□□ 0.07
LINC00544-201ENST00000400540 SEC31BQ9NQW1 1179 aa15.5■□□□□ 0.07
LINC00544-201ENST00000400540 HYPKQ9NX55 129 aa15.5■□□□□ 0.07
LINC00544-201ENST00000400540 HUNKP57058 714 aa15.49■□□□□ 0.07
LINC00544-201ENST00000400540 RBM26Q5T8P6 1007 aaKnown RBP15.49■□□□□ 0.07
LINC00544-201ENST00000400540 ASTN2O75129 1339 aaPredicted RBP15.48■□□□□ 0.07
LINC00544-201ENST00000400540 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
LINC00544-201ENST00000400540 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
LINC00544-201ENST00000400540 RPS8P62241 208 aaKnown RBP15.48■□□□□ 0.07
LINC00544-201ENST00000400540 TRIM28Q13263 835 aaKnown RBP15.48■□□□□ 0.07
LINC00544-201ENST00000400540 KRT26Q7Z3Y9 468 aa15.48■□□□□ 0.07
LINC00544-201ENST00000400540 RIC3Q7Z5B4 369 aa15.48■□□□□ 0.07
LINC00544-201ENST00000400540 JARID2Q92833 1246 aaPredicted RBP15.48■□□□□ 0.07
LINC00544-201ENST00000400540 EYA3Q99504 573 aa15.48■□□□□ 0.07
LINC00544-201ENST00000400540 MYD88Q99836 296 aa15.48■□□□□ 0.07
LINC00544-201ENST00000400540 CA12O43570 354 aa15.47■□□□□ 0.07
LINC00544-201ENST00000400540 GOLGA2Q08379 1002 aa15.47■□□□□ 0.07
LINC00544-201ENST00000400540 ZBTB38Q8NAP3 1195 aaPredicted RBP15.47■□□□□ 0.07
LINC00544-201ENST00000400540 CCDC85AQ96PX6 553 aaPredicted RBP15.47■□□□□ 0.07
LINC00544-201ENST00000400540 MCOLN1Q9GZU1 580 aa15.47■□□□□ 0.07
LINC00544-201ENST00000400540 A0A1B0GUL6 1792 aa15.47■□□□□ 0.07
LINC00544-201ENST00000400540 FAM155AB1AL88 458 aaPredicted RBP15.46■□□□□ 0.07
LINC00544-201ENST00000400540 UFL1O94874 794 aa15.46■□□□□ 0.07
LINC00544-201ENST00000400540 RPS12P25398 132 aaKnown RBP15.46■□□□□ 0.07
LINC00544-201ENST00000400540 NOGQ13253 232 aa15.46■□□□□ 0.07
LINC00544-201ENST00000400540 KIF4BQ2VIQ3 1234 aa15.46■□□□□ 0.07
LINC00544-201ENST00000400540 GBA2Q9HCG7 927 aaPredicted RBP15.46■□□□□ 0.07
LINC00544-201ENST00000400540 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
LINC00544-201ENST00000400540 DCPSQ96C86 337 aaKnown RBP15.45■□□□□ 0.06
LINC00544-201ENST00000400540 ZC3H12CQ9C0D7 883 aaKnown RBP15.45■□□□□ 0.06
LINC00544-201ENST00000400540 GGA3Q9NZ52 723 aa15.45■□□□□ 0.06
LINC00544-201ENST00000400540 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
LINC00544-201ENST00000400540 ANKIB1Q9P2G1 1089 aa15.45■□□□□ 0.06
LINC00544-201ENST00000400540 PAPPA2Q9BXP8 1791 aa15.44■□□□□ 0.06
LINC00544-201ENST00000400540 APAF1O14727 1248 aa15.44■□□□□ 0.06
LINC00544-201ENST00000400540 VIL1P09327 827 aaKnown RBP15.44■□□□□ 0.06
LINC00544-201ENST00000400540 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
LINC00544-201ENST00000400540 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
LINC00544-201ENST00000400540 GGA1Q9UJY5 639 aa15.44■□□□□ 0.06
LINC00544-201ENST00000400540 ZNF609O15014 1411 aa15.43■□□□□ 0.06
LINC00544-201ENST00000400540 PCCAP05165 728 aaPredicted RBP15.43■□□□□ 0.06
LINC00544-201ENST00000400540 DGKZQ13574 1117 aa15.43■□□□□ 0.06
LINC00544-201ENST00000400540 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
LINC00544-201ENST00000400540 C2orf69Q8N8R5 385 aa15.43■□□□□ 0.06
LINC00544-201ENST00000400540 WTIPA6NIX2 430 aaPredicted RBP15.42■□□□□ 0.06
LINC00544-201ENST00000400540 G3V3G9 751 aa15.42■□□□□ 0.06
LINC00544-201ENST00000400540 PDE8AO60658 829 aa15.42■□□□□ 0.06
LINC00544-201ENST00000400540 ZNF157P51786 506 aaPredicted RBP15.42■□□□□ 0.06
LINC00544-201ENST00000400540 GNAI1P63096 354 aa15.42■□□□□ 0.06
LINC00544-201ENST00000400540 DCAF8Q5TAQ9 597 aa15.42■□□□□ 0.06
LINC00544-201ENST00000400540 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
LINC00544-201ENST00000400540 CDCA5Q96FF9 252 aa15.42■□□□□ 0.06
LINC00544-201ENST00000400540 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
LINC00544-201ENST00000400540 CWC25Q9NXE8 425 aaPredicted RBP15.42■□□□□ 0.06
LINC00544-201ENST00000400540 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
LINC00544-201ENST00000400540 RGS19P49795 217 aa15.41■□□□□ 0.06
LINC00544-201ENST00000400540 KIF23Q02241 960 aaPredicted RBP15.41■□□□□ 0.06
LINC00544-201ENST00000400540 MLLT1Q03111 559 aaPredicted RBP15.41■□□□□ 0.06
LINC00544-201ENST00000400540 ANGEL2Q5VTE6 544 aaKnown RBP15.41■□□□□ 0.06
LINC00544-201ENST00000400540 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
LINC00544-201ENST00000400540 SULF1Q8IWU6 871 aa15.41■□□□□ 0.06
LINC00544-201ENST00000400540 METTL22Q9BUU2 404 aaPredicted RBP15.41■□□□□ 0.06
LINC00544-201ENST00000400540 ECM29Q5VYK3 1845 aa15.4■□□□□ 0.06
LINC00544-201ENST00000400540 SLC10A3P09131 477 aa15.4■□□□□ 0.06
LINC00544-201ENST00000400540 ZNF280AP59817 542 aaPredicted RBP15.4■□□□□ 0.06
LINC00544-201ENST00000400540 SCARF1Q14162 830 aa15.4■□□□□ 0.06
LINC00544-201ENST00000400540 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
LINC00544-201ENST00000400540 MAP3K2Q9Y2U5 619 aa15.4■□□□□ 0.06
LINC00544-201ENST00000400540 XDHP47989 1333 aa15.4■□□□□ 0.06
LINC00544-201ENST00000400540 CACNA1FO60840 1977 aa15.39■□□□□ 0.05
LINC00544-201ENST00000400540 IGKV5-2P06315 115 aa15.39■□□□□ 0.05
LINC00544-201ENST00000400540 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
LINC00544-201ENST00000400540 AGBL3Q8NEM8 1001 aa15.39■□□□□ 0.05
LINC00544-201ENST00000400540 CCDC102AQ96A19 550 aa15.39■□□□□ 0.05
LINC00544-201ENST00000400540 GMLQ99445 158 aa15.39■□□□□ 0.05
LINC00544-201ENST00000400540 RNF186Q9NXI6 227 aa15.39■□□□□ 0.05
LINC00544-201ENST00000400540 TRPA1O75762 1119 aa15.38■□□□□ 0.05
LINC00544-201ENST00000400540 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
LINC00544-201ENST00000400540 CTSWP56202 376 aa15.38■□□□□ 0.05
LINC00544-201ENST00000400540 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
LINC00544-201ENST00000400540 MXD3Q9BW11 206 aa15.38■□□□□ 0.05
LINC00544-201ENST00000400540 MYOZ2Q9NPC6 264 aa15.38■□□□□ 0.05
LINC00544-201ENST00000400540 SAGE1Q9NXZ1 904 aa15.38■□□□□ 0.05
LINC00544-201ENST00000400540 DDX58O95786 925 aaKnown RBP15.37■□□□□ 0.05
LINC00544-201ENST00000400540 ATP2B4P23634 1241 aa15.37■□□□□ 0.05
LINC00544-201ENST00000400540 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
LINC00544-201ENST00000400540 CWF19L2Q2TBE0 894 aaKnown RBP15.37■□□□□ 0.05
LINC00544-201ENST00000400540 CCDC30Q5VVM6 783 aa15.37■□□□□ 0.05
LINC00544-201ENST00000400540 MOB2Q70IA6 237 aa15.37■□□□□ 0.05
LINC00544-201ENST00000400540 RASAL3Q86YV0 1011 aa15.37■□□□□ 0.05
LINC00544-201ENST00000400540 CSRNP1Q96S65 589 aa15.37■□□□□ 0.05
LINC00544-201ENST00000400540 GREM2Q9H772 168 aa15.37■□□□□ 0.05
LINC00544-201ENST00000400540 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 USP17L3A6NCW0 530 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 USP17L4A6NCW7 530 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 USP17L8P0C7I0 530 aa15.36■□□□□ 0.05
LINC00544-201ENST00000400540 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms