RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 NLRP9Q7RTR0 991 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 TXLNGQ9NUQ3 528 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 GRIN1Q05586 938 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 AFAP1L1Q8TED9 768 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 NUDCD3Q8IVD9 361 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 ANKRD35Q8N283 1001 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 MRPS26Q9BYN8 205 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 ATP6V0A4Q9HBG4 840 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 BAG4O95429 457 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 PLCB4Q15147 1175 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 GOLGA8AA7E2F4 631 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 GOLGA8BA8MQT2 603 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 SELENOSQ9BQE4 189 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 DCDC2Q9UHG0 476 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 LGSNQ5TDP6 509 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 CDV3Q9UKY7 258 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 NUMA1Q14980 2115 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 CAPN9O14815 690 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 INAQ16352 499 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 ENAHQ8N8S7 591 aaPredicted RBP9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 PDZD8Q8NEN9 1154 aa9.69□□□□□ -0.86
CACNA1C-220ENST00000399655 H0YC42 278 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 PPP1R12AO14974 1030 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 FBXO2Q9UK22 296 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 EID1Q9Y6B2 187 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 ESYT2A0FGR8 921 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 GOLGA6CA6NDK9 693 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 GOLGA6BA6NDN3 693 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 GOLGA6DP0CG33 693 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 IQCA1Q86XH1 822 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 GOLGA6AQ9NYA3 693 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 PSMD6Q15008 389 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 TEX12Q9BXU0 123 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 SESN1Q9Y6P5 492 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 STX6O43752 255 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 ARHGAP4P98171 946 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 CCDC183Q5T5S1 534 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 HDXQ7Z353 690 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 SCAND2PQ9GZW5 306 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 CEP19Q96LK0 163 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 RPGRIP1LQ68CZ1 1315 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 TXNDC9O14530 226 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 ZKSCAN5Q9Y2L8 839 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 IMPG2Q9BZV3 1241 aa9.68□□□□□ -0.86
CACNA1C-220ENST00000399655 MYH9P35579 1960 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 ITIH3Q06033 890 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 A0A087WZG4 1122 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 FAM13AO94988 1023 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 RPAINQ86UA6 219 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 NEUROD6Q96NK8 337 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 LARP1BQ659C4 914 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 PPP4R1Q8TF05 950 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 CCDC12Q8WUD4 166 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 TPX2Q9ULW0 747 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 IFT81Q8WYA0 676 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 PPME1Q9Y570 386 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 PPFIA4O75335 1185 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 NFKBIL1Q9UBC1 381 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 INPP5BP32019 993 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 FAM160A1Q05DH4 1040 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 NMIQ13287 307 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 PHBP35232 272 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 PPP2R5DQ14738 602 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 TAF11Q15544 211 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 MAD1L1Q9Y6D9 718 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 MTRF1O75570 445 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 SLC4A3P48751 1232 aa9.67□□□□□ -0.86
CACNA1C-220ENST00000399655 EVI5O60447 810 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 MTMR7Q9Y216 660 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 PRKG1Q13976 671 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 NBPF8Q3BBV2 869 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 NGDNQ8NEJ9 315 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 STX1AQ16623 288 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 NCBP1Q09161 790 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 MICAL1Q8TDZ2 1067 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 C4BPBP20851 252 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 MTIF2P46199 727 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 STX17P56962 302 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 CTAGE3PQ8IX95 158 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 ANKRD20A4Q4UJ75 823 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 ANKRD20A8PQ5CZ79 823 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 ANKRD20A2Q5SQ80 823 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 ANKRD20A1Q5TYW2 823 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 CCDC93Q567U6 631 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 AFG3L2Q9Y4W6 797 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 ZBTB24O43167 697 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 KRT13P13646 458 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 GINS4Q9BRT9 223 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 CCT6AP40227 531 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 ZNF280CQ8ND82 737 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 STMN3Q9NZ72 180 aa9.66□□□□□ -0.86
CACNA1C-220ENST00000399655 GOLGA8RI6L899 631 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 NEK11Q8NG66 645 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 RMND1Q9NWS8 449 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms