RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GOLIM4O00461 696 aa12.52□□□□□ -0.41
CACNA1C-216ENST00000399638 TROQ12816 1431 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 KRT13P13646 458 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 PAIP2Q9BPZ3 127 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 KRT85P78386 507 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 PPP1R14CQ8TAE6 165 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 RPGRIP1LQ68CZ1 1315 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 MTIF2P46199 727 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 IL2RBP14784 551 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
CACNA1C-216ENST00000399638 UFL1O94874 794 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 FAM13AO94988 1023 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 MXRA7P84157 204 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 PTPDC1A2A3K4 754 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 PDE6BP35913 854 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 SAP30BPQ9UHR5 308 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
CACNA1C-216ENST00000399638 ABL1P00519 1130 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 PDCL2Q8N4E4 241 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 NR1I2O75469 434 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 HAND2P61296 217 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 IFIT1BQ5T764 474 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 PARD3Q8TEW0 1356 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 CAPN15O75808 1086 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 UGGT2Q9NYU1 1516 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 C8orf76Q96K31 380 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 IKBKGQ9Y6K9 419 aa12.49□□□□□ -0.41
CACNA1C-216ENST00000399638 UQCRFS1P1P0C7P4 283 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 DACT3Q96B18 629 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 IRAK4Q9NWZ3 460 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 WDR33Q9C0J8 1336 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 MYCLP12524 364 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 WHAMMQ8TF30 809 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 SLC8A3P57103 927 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 PDE1CQ14123 709 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 FAM107BQ9H098 131 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 GAS8O95995 478 aa12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 XRCC6P12956 609 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA1C-216ENST00000399638 K7ELQ4 463 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 NAPAP54920 295 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 DNAAF4Q8WXU2 420 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 SMTNL1A8MU46 457 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 CCDC192P0DO97 292 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 UPF3BQ9BZI7 483 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 LDHBP07195 334 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 LRRC43Q8N309 656 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 SEPT8Q92599 483 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 FNBP4Q8N3X1 1017 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 TBC1D32Q96NH3 1257 aa12.47□□□□□ -0.41
CACNA1C-216ENST00000399638 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 ERLIN1O75477 346 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 CFAP100Q494V2 611 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 TNRQ92752 1358 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 DYNC1I1O14576 645 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 POLR3GO15318 223 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 PLCG2P16885 1265 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 GLRX3O76003 335 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 ARHGAP29Q52LW3 1261 aa12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 PPP1R9BQ96SB3 815 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms