RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 AIMP1Q12904 312 aaKnown RBP23.74■■□□□ 1.39
UFD1-202ENST00000399523 SF3B3Q15393 1217 aaKnown RBP23.74■■□□□ 1.39
UFD1-202ENST00000399523 DOK7Q18PE1 504 aa23.74■■□□□ 1.39
UFD1-202ENST00000399523 EYA3Q99504 573 aa23.74■■□□□ 1.39
UFD1-202ENST00000399523 TBC1D16Q8TBP0 767 aa23.72■■□□□ 1.39
UFD1-202ENST00000399523 ZNF296Q8WUU4 475 aaPredicted RBP23.72■■□□□ 1.39
UFD1-202ENST00000399523 BABAM1Q9NWV8 329 aa23.72■■□□□ 1.39
UFD1-202ENST00000399523 ZNF280AP59817 542 aaPredicted RBP23.71■■□□□ 1.39
UFD1-202ENST00000399523 HDAC9Q9UKV0 1011 aa23.71■■□□□ 1.39
UFD1-202ENST00000399523 PAPPA2Q9BXP8 1791 aa23.7■■□□□ 1.39
UFD1-202ENST00000399523 ZNF609O15014 1411 aa23.7■■□□□ 1.38
UFD1-202ENST00000399523 NOM1Q5C9Z4 860 aaKnown RBP23.7■■□□□ 1.38
UFD1-202ENST00000399523 ANGEL2Q5VTE6 544 aaKnown RBP23.7■■□□□ 1.38
UFD1-202ENST00000399523 COL4A1P02462 1669 aa23.7■■□□□ 1.38
UFD1-202ENST00000399523 SCARF1Q14162 830 aa23.69■■□□□ 1.38
UFD1-202ENST00000399523 GCC1Q96CN9 775 aa23.69■■□□□ 1.38
UFD1-202ENST00000399523 ZC3H12CQ9C0D7 883 aaKnown RBP23.69■■□□□ 1.38
UFD1-202ENST00000399523 MKI67P46013 3256 aaKnown RBP23.68■■□□□ 1.38
UFD1-202ENST00000399523 TBC1D8O95759 1140 aa23.68■■□□□ 1.38
UFD1-202ENST00000399523 AGBL3Q8NEM8 1001 aa23.68■■□□□ 1.38
UFD1-202ENST00000399523 NECTIN2Q92692 538 aa23.68■■□□□ 1.38
UFD1-202ENST00000399523 PODXL2Q9NZ53 605 aa23.68■■□□□ 1.38
UFD1-202ENST00000399523 FBXO46Q6PJ61 603 aaPredicted RBP23.67■■□□□ 1.38
UFD1-202ENST00000399523 ZNF428Q96B54 188 aa23.67■■□□□ 1.38
UFD1-202ENST00000399523 FAM89AQ96GI7 184 aa23.67■■□□□ 1.38
UFD1-202ENST00000399523 ISCA1Q9BUE6 129 aa23.67■■□□□ 1.38
UFD1-202ENST00000399523 PNNQ9H307 717 aaKnown RBP23.67■■□□□ 1.38
UFD1-202ENST00000399523 PITPNM2Q9BZ72 1349 aa23.66■■□□□ 1.38
UFD1-202ENST00000399523 MAPK8IP3Q9UPT6 1336 aa23.66■■□□□ 1.38
UFD1-202ENST00000399523 TM4SF4P48230 202 aa23.66■■□□□ 1.38
UFD1-202ENST00000399523 RPS8P62241 208 aaKnown RBP23.66■■□□□ 1.38
UFD1-202ENST00000399523 GPR25O00155 361 aa23.65■■□□□ 1.38
UFD1-202ENST00000399523 RSBN1LQ6PCB5 846 aaPredicted RBP23.65■■□□□ 1.38
UFD1-202ENST00000399523 PLBD2Q8NHP8 589 aa23.65■■□□□ 1.38
UFD1-202ENST00000399523 MOB2Q70IA6 237 aa23.64■■□□□ 1.37
UFD1-202ENST00000399523 GMLQ99445 158 aa23.64■■□□□ 1.37
UFD1-202ENST00000399523 PSME4Q14997 1843 aa23.63■■□□□ 1.37
UFD1-202ENST00000399523 G3V3G9 751 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 UBE2Q2LH0YL09 131 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 USP17L8P0C7I0 530 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 DCAF8Q5TAQ9 597 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 ANKRD13DQ6ZTN6 518 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 CFHR5Q9BXR6 569 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 MYOZ2Q9NPC6 264 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 HTTP42858 3142 aa23.62■■□□□ 1.37
UFD1-202ENST00000399523 UFL1O94874 794 aa23.61■■□□□ 1.37
UFD1-202ENST00000399523 RIPK4P57078 832 aa23.61■■□□□ 1.37
UFD1-202ENST00000399523 TRIM28Q13263 835 aaKnown RBP23.61■■□□□ 1.37
UFD1-202ENST00000399523 ATP5J2-PTCD1G3V325 749 aa23.6■■□□□ 1.37
UFD1-202ENST00000399523 IRS4O14654 1257 aaPredicted RBP23.6■■□□□ 1.37
UFD1-202ENST00000399523 HABP4Q5JVS0 413 aaKnown RBP23.6■■□□□ 1.37
UFD1-202ENST00000399523 CHPF2Q9P2E5 772 aa23.6■■□□□ 1.37
UFD1-202ENST00000399523 ANKIB1Q9P2G1 1089 aa23.6■■□□□ 1.37
UFD1-202ENST00000399523 GGA1Q9UJY5 639 aa23.6■■□□□ 1.37
UFD1-202ENST00000399523 KIAA0100Q14667 2235 aaKnown RBP23.6■■□□□ 1.37
UFD1-202ENST00000399523 FKTNO75072 461 aa23.58■■□□□ 1.37
UFD1-202ENST00000399523 RTL5Q5HYW3 569 aaPredicted RBP23.58■■□□□ 1.37
UFD1-202ENST00000399523 SCAF8Q9UPN6 1271 aaKnown RBP23.58■■□□□ 1.37
UFD1-202ENST00000399523 SREBF2Q12772 1141 aa23.57■■□□□ 1.36
UFD1-202ENST00000399523 KRT24Q2M2I5 525 aa23.57■■□□□ 1.36
UFD1-202ENST00000399523 PRAMEF18Q5VWM3 479 aa23.57■■□□□ 1.36
UFD1-202ENST00000399523 SEC31BQ9NQW1 1179 aa23.57■■□□□ 1.36
UFD1-202ENST00000399523 CENPFP49454 3210 aa23.56■■□□□ 1.36
UFD1-202ENST00000399523 USP17L3A6NCW0 530 aa23.56■■□□□ 1.36
UFD1-202ENST00000399523 USP17L4A6NCW7 530 aa23.56■■□□□ 1.36
UFD1-202ENST00000399523 CHL1O00533 1208 aa23.56■■□□□ 1.36
UFD1-202ENST00000399523 USP17L1Q7RTZ2 530 aa23.56■■□□□ 1.36
UFD1-202ENST00000399523 R3HDMLQ9H3Y0 253 aa23.56■■□□□ 1.36
UFD1-202ENST00000399523 LMOD3Q0VAK6 560 aa23.55■■□□□ 1.36
UFD1-202ENST00000399523 TTLL12Q14166 644 aaPredicted RBP23.55■■□□□ 1.36
UFD1-202ENST00000399523 NBPF9Q3BBW0 867 aa23.55■■□□□ 1.36
UFD1-202ENST00000399523 PODNQ7Z5L7 613 aa23.55■■□□□ 1.36
UFD1-202ENST00000399523 TMPOP42166 694 aaKnown RBP23.54■■□□□ 1.36
UFD1-202ENST00000399523 HDGFL1Q5TGJ6 251 aa23.54■■□□□ 1.36
UFD1-202ENST00000399523 ZBTB38Q8NAP3 1195 aaPredicted RBP23.54■■□□□ 1.36
UFD1-202ENST00000399523 DBF4Q9UBU7 674 aaPredicted RBP23.54■■□□□ 1.36
UFD1-202ENST00000399523 HOXB7P09629 217 aa23.53■■□□□ 1.36
UFD1-202ENST00000399523 HSP90B1P14625 803 aaKnown RBP23.53■■□□□ 1.36
UFD1-202ENST00000399523 MKRN3Q13064 507 aaKnown RBP23.53■■□□□ 1.36
UFD1-202ENST00000399523 NF2P35240 595 aa23.52■■□□□ 1.36
UFD1-202ENST00000399523 PTPN12Q05209 780 aaKnown RBP23.52■■□□□ 1.36
UFD1-202ENST00000399523 INTS3Q68E01 1043 aaKnown RBP23.52■■□□□ 1.36
UFD1-202ENST00000399523 XDHP47989 1333 aa23.52■■□□□ 1.36
UFD1-202ENST00000399523 HYPKQ9NX55 129 aa23.51■■□□□ 1.35
UFD1-202ENST00000399523 BRCA2P51587 3418 aa23.5■■□□□ 1.35
UFD1-202ENST00000399523 WNT10BO00744 389 aa23.5■■□□□ 1.35
UFD1-202ENST00000399523 ALDH1A1P00352 501 aa23.5■■□□□ 1.35
UFD1-202ENST00000399523 ATP2B4P23634 1241 aa23.5■■□□□ 1.35
UFD1-202ENST00000399523 CCDC152Q4G0S7 254 aa23.5■■□□□ 1.35
UFD1-202ENST00000399523 POTEFA5A3E0 1075 aa23.49■■□□□ 1.35
UFD1-202ENST00000399523 LDLRAD1Q5T700 205 aa23.49■■□□□ 1.35
UFD1-202ENST00000399523 SPRYD7Q5W111 196 aa23.49■■□□□ 1.35
UFD1-202ENST00000399523 ARMC9Q7Z3E5 817 aa23.49■■□□□ 1.35
UFD1-202ENST00000399523 DACT2Q5SW24 774 aa23.48■■□□□ 1.35
UFD1-202ENST00000399523 OGFOD1Q8N543 542 aa23.48■■□□□ 1.35
UFD1-202ENST00000399523 TRIM17Q9Y577 477 aa23.48■■□□□ 1.35
UFD1-202ENST00000399523 MMP14P50281 582 aa23.47■■□□□ 1.35
UFD1-202ENST00000399523 OTOP1Q7RTM1 612 aa23.47■■□□□ 1.35
UFD1-202ENST00000399523 RBBP6Q7Z6E9 1792 aaKnown RBP23.47■■□□□ 1.35
UFD1-202ENST00000399523 CEP290O15078 2479 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms