RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 L1TD1Q5T7N2 865 aaKnown RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 TAS1R3Q7RTX0 852 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 THEMISQ8N1K5 641 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 INTUQ9ULD6 942 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 SLC45A1Q9Y2W3 748 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 PCDHB15Q9Y5E8 787 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 SETD1AO15047 1707 aaKnown RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 RRM1P23921 792 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 ZNF76P36508 570 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 ALDH1L2Q3SY69 923 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 ZSCAN29Q8IWY8 852 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 RETREG1Q9H6L5 497 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 GPHNQ9NQX3 736 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 CWC25Q9NXE8 425 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 DIS3Q9Y2L1 958 aaKnown RBP7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 IQGAP1P46940 1657 aa7.53□□□□□ -1.2
TRAPPC13-202ENST00000399438 LILRB3O75022 631 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 ABL1P00519 1130 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 RACK1P63244 317 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 EXOSC9Q06265 439 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 ANKRD23Q86SG2 305 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 C1orf216Q8TAB5 229 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 RBM33Q96EV2 1170 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 SLKQ9H2G2 1235 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 CREBZFQ9NS37 354 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 SYNPO2Q9UMS6 1093 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 NOL7Q9UMY1 257 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 INPP5FQ9Y2H2 1132 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 CGNL1Q0VF96 1302 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 CCDC163A0A0D9SF12 145 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 DYTNA2CJ06 578 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 FAM196BA6NMK8 535 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L15C9J2P7 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L10C9JJH3 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L13C9JLJ4 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L12C9JPN9 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L11C9JVI0 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L21D6R901 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L18D6R9N7 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L22D6RA61 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L17D6RBQ6 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L19D6RCP7 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L20D6RJB6 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 TSPAN6O43657 245 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 RNASEH2AO75792 299 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 USP17L24Q0WX57 530 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 RRS1Q15050 365 aaKnown RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 EVC2Q86UK5 1308 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 PRMT3O60678 531 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 CDC27P30260 824 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 DCTN1Q14203 1278 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 KRT77Q7Z794 578 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 ZSCAN30Q86W11 494 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 MPNDQ8N594 471 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 CDK19Q9BWU1 502 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 ALDH8A1Q9H2A2 487 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 PLEKHG1Q9ULL1 1385 aa7.52□□□□□ -1.21
TRAPPC13-202ENST00000399438 KDM2BQ8NHM5 1336 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 TDO2P48775 406 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 C8orf34Q49A92 452 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 PAF1Q8N7H5 531 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 SEZ6LQ9BYH1 1024 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 HOMER2Q9NSB8 354 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 PARP2Q9UGN5 583 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 EMILIN1Q9Y6C2 1016 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 ALKQ9UM73 1620 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 ADGRB1O14514 1584 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 A0A1W2PP64 1363 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 PIK3CDO00329 1044 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 SOX11P35716 441 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 CDKN1CP49918 316 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 HDGFP51858 240 aaKnown RBP7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 MTA1Q13330 715 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 LRRC41Q15345 812 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 CARD10Q9BWT7 1032 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 SMC4Q9NTJ3 1288 aa7.51□□□□□ -1.21
TRAPPC13-202ENST00000399438 FYB1O15117 783 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 SPTLC1O15269 473 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 LTKP29376 864 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 EXOSC10Q01780 885 aaKnown RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 NME9Q86XW9 330 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 ITPRIPQ8IWB1 547 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 CFAP53Q96M91 514 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 PTPRHQ9HD43 1115 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 DIP2AQ14689 1571 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 MED14O60244 1454 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 FAM83GA6ND36 823 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 KRT18P05783 430 aaKnown RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 CTHP32929 405 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 ZNF394Q53GI3 561 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 CENPQQ7L2Z9 268 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 SPIRE2Q8WWL2 714 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 ERP27Q96DN0 273 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 MYCBPQ99417 103 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 RIPK4P57078 832 aa7.5□□□□□ -1.21
TRAPPC13-202ENST00000399438 PTK7Q13308 1070 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms