RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 RPAP2Q8IXW5 612 aaPredicted RBP12.77□□□□□ -0.36
ITSN1-207ENST00000399338 SH3GL3Q99963 347 aa12.77□□□□□ -0.36
ITSN1-207ENST00000399338 CD248Q9HCU0 757 aa12.77□□□□□ -0.36
ITSN1-207ENST00000399338 CDC42BPBQ9Y5S2 1711 aa12.77□□□□□ -0.36
ITSN1-207ENST00000399338 SHOX2O60902 331 aaPredicted RBP12.77□□□□□ -0.37
ITSN1-207ENST00000399338 LARGE1O95461 756 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 RBM5P52756 815 aaKnown RBP eCLIP12.77□□□□□ -0.37
ITSN1-207ENST00000399338 ICA1Q05084 483 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 TEX13AQ9BXU3 409 aaPredicted RBP12.77□□□□□ -0.37
ITSN1-207ENST00000399338 ANKZF1Q9H8Y5 726 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 ODF2LQ9ULJ1 636 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 TSPY4P0CV99 314 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 TSPY10P0CW01 314 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 INPP5BP32019 993 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 ISM2Q6H9L7 571 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 SCAND2PQ9GZW5 306 aaPredicted RBP12.77□□□□□ -0.37
ITSN1-207ENST00000399338 NUCKS1Q9H1E3 243 aaKnown RBP12.77□□□□□ -0.37
ITSN1-207ENST00000399338 PTPRTO14522 1441 aa12.77□□□□□ -0.37
ITSN1-207ENST00000399338 VPS37CA5D8V6 355 aaPredicted RBP12.76□□□□□ -0.37
ITSN1-207ENST00000399338 BECN2A8MW95 431 aa12.76□□□□□ -0.37
ITSN1-207ENST00000399338 MYBL2P10244 700 aa12.76□□□□□ -0.37
ITSN1-207ENST00000399338 BAG1Q99933 345 aaPredicted RBP12.76□□□□□ -0.37
ITSN1-207ENST00000399338 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
ITSN1-207ENST00000399338 EME2A4GXA9 379 aaPredicted RBP12.76□□□□□ -0.37
ITSN1-207ENST00000399338 VWA3AA6NCI4 1184 aa12.76□□□□□ -0.37
ITSN1-207ENST00000399338 GOLGA6L4A6NEF3 574 aa12.76□□□□□ -0.37
ITSN1-207ENST00000399338 ARID4AP29374 1257 aaPredicted RBP12.76□□□□□ -0.37
ITSN1-207ENST00000399338 HSP90B2PQ58FF3 399 aa12.76□□□□□ -0.37
ITSN1-207ENST00000399338 AMOTL1Q8IY63 956 aa12.76□□□□□ -0.37
ITSN1-207ENST00000399338 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
ITSN1-207ENST00000399338 RDXP35241 583 aaKnown RBP12.75□□□□□ -0.37
ITSN1-207ENST00000399338 MSANTD4Q8NCY6 345 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 LEO1Q8WVC0 666 aaPredicted RBP12.75□□□□□ -0.37
ITSN1-207ENST00000399338 PGBD1Q96JS3 809 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 SALL3Q9BXA9 1300 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 APBB1O00213 710 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 EBAG9O00559 213 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 NRDCO43847 1150 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 PHACTR2O75167 634 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
ITSN1-207ENST00000399338 PRPF6O94906 941 aaKnown RBP12.75□□□□□ -0.37
ITSN1-207ENST00000399338 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 IQCA1Q86XH1 822 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 NUTM1Q86Y26 1132 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 ARMC2Q8NEN0 867 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 AFAP1L1Q8TED9 768 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 ACBD3Q9H3P7 528 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 ABCB6Q9NP58 842 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 CAND2O75155 1236 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 CCT5P48643 541 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 RWDD2BP57060 319 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 CASP8Q14790 479 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 TMC6Q7Z403 805 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 WDR24Q96S15 920 aa12.75□□□□□ -0.37
ITSN1-207ENST00000399338 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
ITSN1-207ENST00000399338 COQ9O75208 318 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 WWC2Q6AWC2 1192 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 CCDC83Q8IWF9 413 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 PNKPQ96T60 521 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
ITSN1-207ENST00000399338 SNX14Q9Y5W7 946 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 MYO1FO00160 1098 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 FSBPO95073 299 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 ZNF513Q8N8E2 541 aaPredicted RBP12.74□□□□□ -0.37
ITSN1-207ENST00000399338 IRAK4Q9NWZ3 460 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 CAPN7Q9Y6W3 813 aa12.74□□□□□ -0.37
ITSN1-207ENST00000399338 INO80Q9ULG1 1556 aaPredicted RBP12.74□□□□□ -0.37
ITSN1-207ENST00000399338 ADCY9O60503 1353 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 RNF40O75150 1001 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 ERLIN1O75477 346 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 IL25Q9H293 177 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 SPATS2LQ9NUQ6 558 aaKnown RBP12.73□□□□□ -0.37
ITSN1-207ENST00000399338 DTNBO60941 627 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 SYF2O95926 243 aaKnown RBP12.73□□□□□ -0.37
ITSN1-207ENST00000399338 TRAF1Q13077 416 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 TSPYL6Q8N831 410 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 AARSP49588 968 aaKnown RBP eCLIP12.73□□□□□ -0.37
ITSN1-207ENST00000399338 SKIDA1Q1XH10 827 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 AOPEPQ8N6M6 819 aa12.73□□□□□ -0.37
ITSN1-207ENST00000399338 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
ITSN1-207ENST00000399338 XPO4Q9C0E2 1151 aaKnown RBP12.73□□□□□ -0.37
ITSN1-207ENST00000399338 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
ITSN1-207ENST00000399338 MICAL1Q8TDZ2 1067 aa12.72□□□□□ -0.37
ITSN1-207ENST00000399338 DHX58Q96C10 678 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms