RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CCDC57Q2TAC2 916 aa15.52■□□□□ 0.08
HLA-DQB1-203ENST00000399082 EXOC6Q8TAG9 804 aa15.52■□□□□ 0.08
HLA-DQB1-203ENST00000399082 HDAC5Q9UQL6 1122 aa15.52■□□□□ 0.08
HLA-DQB1-203ENST00000399082 SRGAP3O43295 1099 aa15.51■□□□□ 0.07
HLA-DQB1-203ENST00000399082 PRELPP51888 382 aa15.51■□□□□ 0.07
HLA-DQB1-203ENST00000399082 GPR162Q16538 588 aa15.51■□□□□ 0.07
HLA-DQB1-203ENST00000399082 SP8Q8IXZ3 490 aa15.51■□□□□ 0.07
HLA-DQB1-203ENST00000399082 SSH3Q8TE77 659 aa15.51■□□□□ 0.07
HLA-DQB1-203ENST00000399082 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
HLA-DQB1-203ENST00000399082 PA2G4Q9UQ80 394 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB1-203ENST00000399082 IGHMBP2P38935 993 aaKnown RBP15.5■□□□□ 0.07
HLA-DQB1-203ENST00000399082 LRRC24Q50LG9 513 aa15.5■□□□□ 0.07
HLA-DQB1-203ENST00000399082 CCDC93Q567U6 631 aa15.5■□□□□ 0.07
HLA-DQB1-203ENST00000399082 TMC4Q7Z404 712 aa15.5■□□□□ 0.07
HLA-DQB1-203ENST00000399082 MINPP1Q9UNW1 487 aa15.5■□□□□ 0.07
HLA-DQB1-203ENST00000399082 PCDHB15Q9Y5E8 787 aa15.5■□□□□ 0.07
HLA-DQB1-203ENST00000399082 SBF1O95248 1867 aa15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 WTIPA6NIX2 430 aaPredicted RBP15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 GPSM2P81274 684 aa15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 RASSF7Q02833 373 aa15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 ATG9AQ7Z3C6 839 aa15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 COPRSQ9NQ92 184 aa15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 RIPOR2Q9Y4F9 1068 aa15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 UTRNP46939 3433 aa15.49■□□□□ 0.07
HLA-DQB1-203ENST00000399082 COL4A5P29400 1685 aa15.48■□□□□ 0.07
HLA-DQB1-203ENST00000399082 CC2D2BQ6DHV5 1058 aa15.48■□□□□ 0.07
HLA-DQB1-203ENST00000399082 LDHAL6AQ6ZMR3 332 aa15.48■□□□□ 0.07
HLA-DQB1-203ENST00000399082 CHMP4BQ9H444 224 aaKnown RBP15.48■□□□□ 0.07
HLA-DQB1-203ENST00000399082 LTBP3Q9NS15 1303 aa15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 CHRNDQ07001 517 aa15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 TAF7LQ5H9L4 462 aa15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 SOGA3Q5TF21 947 aa15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 RPAP2Q8IXW5 612 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 VGLL2Q8N8G2 317 aa15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 MPHOSPH8Q99549 860 aa15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 PODXL2Q9NZ53 605 aa15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQB1-203ENST00000399082 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 SNAP23O00161 211 aa15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 EYA2O00167 538 aa15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 ARHGAP27Q6ZUM4 889 aa15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 HELBQ8NG08 1087 aaPredicted RBP15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 PSMD1Q99460 953 aa15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 SIL1Q9H173 461 aa15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 POLLQ9UGP5 575 aa15.46■□□□□ 0.07
HLA-DQB1-203ENST00000399082 IRS2Q9Y4H2 1338 aa15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 GRIN3BO60391 1043 aa15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 CIAO1O76071 339 aa15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 DPP8Q6V1X1 898 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 RTKN2Q8IZC4 609 aa15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 MPNDQ8N594 471 aa15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 TBC1D16Q8TBP0 767 aa15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 GPR101Q96P66 508 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 CNNM1Q9NRU3 951 aa15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 NSFL1CQ9UNZ2 370 aaKnown RBP15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
HLA-DQB1-203ENST00000399082 XDHP47989 1333 aa15.44■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ABCB7O75027 752 aa15.44■□□□□ 0.06
HLA-DQB1-203ENST00000399082 TAF5LO75529 589 aa15.44■□□□□ 0.06
HLA-DQB1-203ENST00000399082 TAOK3Q9H2K8 898 aa15.44■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ZNF277Q9NRM2 450 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQB1-203ENST00000399082 FBXO3Q9UK99 471 aa15.44■□□□□ 0.06
HLA-DQB1-203ENST00000399082 DICER1Q9UPY3 1922 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB1-203ENST00000399082 KLRK1P26718 216 aa15.43■□□□□ 0.06
HLA-DQB1-203ENST00000399082 TIAM2Q8IVF5 1701 aa15.43■□□□□ 0.06
HLA-DQB1-203ENST00000399082 MROH5Q6ZUA9 1318 aa15.43■□□□□ 0.06
HLA-DQB1-203ENST00000399082 UFL1O94874 794 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 SASH1O94885 1247 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 GRIPAP1Q4V328 841 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ANKRD2Q9GZV1 360 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ANKIB1Q9P2G1 1089 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 GGA1Q9UJY5 639 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 EXOC6BQ9Y2D4 811 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ARAP2Q8WZ64 1704 aa15.42■□□□□ 0.06
HLA-DQB1-203ENST00000399082 SURF6O75683 361 aaKnown RBP15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 PDE8BO95263 885 aa15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 FGFR2P21802 821 aa15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ATP2B4P23634 1241 aa15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 IL15P40933 162 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 AAMPQ13685 434 aa15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 METTL24Q5JXM2 366 aa15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 CHD4Q14839 1912 aa15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ZNF804BA4D1E1 1349 aa15.41■□□□□ 0.06
HLA-DQB1-203ENST00000399082 C6orf229H3BNL8 230 aa15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 TFCP2Q12800 502 aa15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 AOC3Q16853 763 aa15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 LEMD3Q9Y2U8 911 aa15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ZNF609O15014 1411 aa15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 ZNF646O15015 1829 aaPredicted RBP15.4■□□□□ 0.06
HLA-DQB1-203ENST00000399082 MED23Q9ULK4 1368 aa15.39■□□□□ 0.05
HLA-DQB1-203ENST00000399082 HMMRO75330 724 aa15.39■□□□□ 0.05
HLA-DQB1-203ENST00000399082 LMNB1P20700 586 aa15.39■□□□□ 0.05
HLA-DQB1-203ENST00000399082 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB1-203ENST00000399082 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms