RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 UFL1O94874 794 aa17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 IGHMBP2P38935 993 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 C16orf71Q8IYS4 520 aaPredicted RBP17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 TNNQ9UQP3 1299 aa17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 GJA3Q9Y6H8 435 aa17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
HLA-DQB1-202ENST00000399079 ANKRD18BA2A2Z9 1011 aa17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 GPC2Q8N158 579 aa17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 MPHOSPH8Q99549 860 aa17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 BICC1Q9H694 974 aaKnown RBP17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 GGA1Q9UJY5 639 aa17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ZNRF3Q9ULT6 936 aa17.77■□□□□ 0.43
HLA-DQB1-202ENST00000399079 XDHP47989 1333 aa17.76■□□□□ 0.43
HLA-DQB1-202ENST00000399079 SPEF2Q9C093 1822 aa17.76■□□□□ 0.43
HLA-DQB1-202ENST00000399079 YDJCA8MPS7 323 aa17.76■□□□□ 0.43
HLA-DQB1-202ENST00000399079 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
HLA-DQB1-202ENST00000399079 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-202ENST00000399079 DBNDD1Q9H9R9 158 aa17.76■□□□□ 0.43
HLA-DQB1-202ENST00000399079 TRIM27P14373 513 aa17.75■□□□□ 0.43
HLA-DQB1-202ENST00000399079 CXCL9Q07325 125 aa17.75■□□□□ 0.43
HLA-DQB1-202ENST00000399079 DOK7Q18PE1 504 aa17.75■□□□□ 0.43
HLA-DQB1-202ENST00000399079 CCDC57Q2TAC2 916 aa17.75■□□□□ 0.43
HLA-DQB1-202ENST00000399079 EYA3Q99504 573 aa17.75■□□□□ 0.43
HLA-DQB1-202ENST00000399079 RAD17O75943 681 aa17.74■□□□□ 0.43
HLA-DQB1-202ENST00000399079 CLUAP1Q96AJ1 413 aa17.74■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ZC3H12CQ9C0D7 883 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-202ENST00000399079 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
HLA-DQB1-202ENST00000399079 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ANKRD44Q8N8A2 993 aa17.73■□□□□ 0.43
HLA-DQB1-202ENST00000399079 KCNQ5Q9NR82 932 aa17.73■□□□□ 0.43
HLA-DQB1-202ENST00000399079 CEP350Q5VT06 3117 aa17.73■□□□□ 0.43
HLA-DQB1-202ENST00000399079 IPO8O15397 1037 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ECE2O60344 883 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 ATP2B4P23634 1241 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 CHRNDQ07001 517 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 RABL6Q3YEC7 729 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 RBM46Q8TBY0 533 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 SNAP23O00161 211 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 SCNN1DP51172 638 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 INTS3Q68E01 1043 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 CIAPIN1Q6FI81 312 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 LDHAL6AQ6ZMR3 332 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 HELBQ8NG08 1087 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 TAF1DQ9H5J8 278 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 HACL1Q9UJ83 578 aa17.72■□□□□ 0.43
HLA-DQB1-202ENST00000399079 TAF5LO75529 589 aa17.71■□□□□ 0.43
HLA-DQB1-202ENST00000399079 MEIS3Q99687 375 aa17.71■□□□□ 0.43
HLA-DQB1-202ENST00000399079 UBTFL1P0CB47 393 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-202ENST00000399079 EPS15P42566 896 aa17.7■□□□□ 0.42
HLA-DQB1-202ENST00000399079 ZKSCAN2Q63HK3 967 aa17.7■□□□□ 0.42
HLA-DQB1-202ENST00000399079 TXNRD3Q86VQ6 643 aa17.7■□□□□ 0.42
HLA-DQB1-202ENST00000399079 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-202ENST00000399079 ANKRD2Q9GZV1 360 aa17.7■□□□□ 0.42
HLA-DQB1-202ENST00000399079 CNNM1Q9NRU3 951 aa17.7■□□□□ 0.42
HLA-DQB1-202ENST00000399079 G3V3G9 751 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 PSMD14O00487 310 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 KLRK1P26718 216 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 EPHX2P34913 555 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 EAPPQ56P03 285 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 DCAF8Q5TAQ9 597 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 KLHDC4Q8TBB5 520 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 LEMD3Q9Y2U8 911 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 SCN4AP35499 1836 aa17.69■□□□□ 0.42
HLA-DQB1-202ENST00000399079 ZNF804BA4D1E1 1349 aa17.68■□□□□ 0.42
HLA-DQB1-202ENST00000399079 PLIN1O60240 522 aa17.68■□□□□ 0.42
HLA-DQB1-202ENST00000399079 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
HLA-DQB1-202ENST00000399079 TNIP1Q15025 636 aa17.68■□□□□ 0.42
HLA-DQB1-202ENST00000399079 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
HLA-DQB1-202ENST00000399079 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
HLA-DQB1-202ENST00000399079 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
HLA-DQB1-202ENST00000399079 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 FSTL1Q12841 308 aa17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 GPRC5DQ9NZD1 345 aa17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 LRRFIP2Q9Y608 721 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 HSPA6P17066 643 aa17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 KCNJ4P48050 445 aa17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 LRRC24Q50LG9 513 aa17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
HLA-DQB1-202ENST00000399079 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
HLA-DQB1-202ENST00000399079 RIPOR2Q9Y4F9 1068 aa17.66■□□□□ 0.42
HLA-DQB1-202ENST00000399079 SCN9AQ15858 1988 aa17.65■□□□□ 0.42
HLA-DQB1-202ENST00000399079 RLBP1P12271 317 aa17.65■□□□□ 0.42
HLA-DQB1-202ENST00000399079 PNMA8AQ86V59 439 aaPredicted RBP17.65■□□□□ 0.42
HLA-DQB1-202ENST00000399079 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB1-202ENST00000399079 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
HLA-DQB1-202ENST00000399079 PODNQ7Z5L7 613 aa17.64■□□□□ 0.41
HLA-DQB1-202ENST00000399079 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
HLA-DQB1-202ENST00000399079 CNOT7Q9UIV1 285 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-202ENST00000399079 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
HLA-DQB1-202ENST00000399079 IRS2Q9Y4H2 1338 aa17.64■□□□□ 0.41
HLA-DQB1-202ENST00000399079 GNAI3P08754 354 aa17.63■□□□□ 0.41
HLA-DQB1-202ENST00000399079 VIL1P09327 827 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms