RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
C4orf3-201ENST00000399075 HELLSQ9NRZ9 838 aa13.49□□□□□ -0.25
C4orf3-201ENST00000399075 CCDC191Q8NCU4 936 aa13.48□□□□□ -0.25
C4orf3-201ENST00000399075 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
C4orf3-201ENST00000399075 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
C4orf3-201ENST00000399075 KDM4AO75164 1064 aa13.48□□□□□ -0.25
C4orf3-201ENST00000399075 CIAO1O76071 339 aa13.48□□□□□ -0.25
C4orf3-201ENST00000399075 TCEANC2Q96MN5 208 aa13.48□□□□□ -0.25
C4orf3-201ENST00000399075 DSCC1Q9BVC3 393 aa13.48□□□□□ -0.25
C4orf3-201ENST00000399075 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
C4orf3-201ENST00000399075 CYP21A2P08686 494 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 GIMAP6Q6P9H5 292 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 ARID3AQ99856 593 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 LLPHQ9BRT6 129 aaKnown RBP13.47□□□□□ -0.25
C4orf3-201ENST00000399075 USP25Q9UHP3 1055 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 LAMA4Q16363 1823 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
C4orf3-201ENST00000399075 ADCY5O95622 1261 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 CCDC192P0DO97 292 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
C4orf3-201ENST00000399075 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
C4orf3-201ENST00000399075 COL5A2P05997 1499 aaPredicted RBP13.47□□□□□ -0.25
C4orf3-201ENST00000399075 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 DDX46Q7L014 1031 aaKnown RBP13.47□□□□□ -0.25
C4orf3-201ENST00000399075 PAG1Q9NWQ8 432 aa13.47□□□□□ -0.25
C4orf3-201ENST00000399075 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
C4orf3-201ENST00000399075 Q6ZUG5 572 aa13.46□□□□□ -0.25
C4orf3-201ENST00000399075 EYA2O00167 538 aa13.46□□□□□ -0.26
C4orf3-201ENST00000399075 ZMYM1Q5SVZ6 1142 aa13.46□□□□□ -0.26
C4orf3-201ENST00000399075 CCDC129Q6ZRS4 1044 aa13.46□□□□□ -0.26
C4orf3-201ENST00000399075 FERMT3Q86UX7 667 aa13.46□□□□□ -0.26
C4orf3-201ENST00000399075 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.26
C4orf3-201ENST00000399075 SMARCC2Q8TAQ2 1214 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 SEC62Q99442 399 aaKnown RBP13.45□□□□□ -0.26
C4orf3-201ENST00000399075 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 NUP62CLQ9H1M0 184 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
C4orf3-201ENST00000399075 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 NDUFB9Q9Y6M9 179 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 ABCA3Q99758 1704 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 PFKFB2O60825 505 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 RESTQ13127 1097 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 MAP3K11Q16584 847 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 RBM43Q6ZSC3 357 aaKnown RBP13.45□□□□□ -0.26
C4orf3-201ENST00000399075 LEO1Q8WVC0 666 aaPredicted RBP13.45□□□□□ -0.26
C4orf3-201ENST00000399075 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
C4orf3-201ENST00000399075 DTNBO60941 627 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 STK3Q13188 491 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
C4orf3-201ENST00000399075 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 MYH15Q9Y2K3 1946 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 BRD2P25440 801 aaKnown RBP13.44□□□□□ -0.26
C4orf3-201ENST00000399075 PRDM11Q9NQV5 511 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 GOLIM4O00461 696 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 STOX1Q6ZVD7 989 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 BRINP3Q76B58 766 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 FAM200AQ8TCP9 573 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
C4orf3-201ENST00000399075 JAK2O60674 1132 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 TPM3P06753 285 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 LIG1P18858 919 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 NAA16Q6N069 864 aaPredicted RBP13.43□□□□□ -0.26
C4orf3-201ENST00000399075 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 PIBF1Q8WXW3 757 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 BRF1Q92994 677 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 CHMP4CQ96CF2 233 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 NEUROD6Q96NK8 337 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 ISCA1Q9BUE6 129 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
C4orf3-201ENST00000399075 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 A1BGP04217 495 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 CHGBP05060 677 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 HSP90B1P14625 803 aaKnown RBP13.43□□□□□ -0.26
C4orf3-201ENST00000399075 HMGN5P82970 282 aaKnown RBP13.43□□□□□ -0.26
C4orf3-201ENST00000399075 EXOSC10Q01780 885 aaKnown RBP13.43□□□□□ -0.26
C4orf3-201ENST00000399075 FAM173BQ6P4H8 233 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 FBXL16Q8N461 479 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
C4orf3-201ENST00000399075 ABCC12Q96J65 1359 aa13.42□□□□□ -0.26
C4orf3-201ENST00000399075 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
C4orf3-201ENST00000399075 RNF113AO15541 343 aaKnown RBP13.42□□□□□ -0.26
C4orf3-201ENST00000399075 IL2RBP14784 551 aa13.42□□□□□ -0.26
C4orf3-201ENST00000399075 SCRN1Q12765 414 aa13.42□□□□□ -0.26
C4orf3-201ENST00000399075 TRIM28Q13263 835 aaKnown RBP13.42□□□□□ -0.26
C4orf3-201ENST00000399075 LRRFIP1Q32MZ4 808 aaKnown RBP13.42□□□□□ -0.26
C4orf3-201ENST00000399075 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
C4orf3-201ENST00000399075 CLSTN2Q9H4D0 955 aa13.42□□□□□ -0.26
C4orf3-201ENST00000399075 CFAP45Q9UL16 551 aa13.42□□□□□ -0.26
C4orf3-201ENST00000399075 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
C4orf3-201ENST00000399075 MAST3O60307 1309 aa13.42□□□□□ -0.26
C4orf3-201ENST00000399075 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
C4orf3-201ENST00000399075 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
C4orf3-201ENST00000399075 TIMM10P62072 90 aa13.41□□□□□ -0.26
C4orf3-201ENST00000399075 TYRO3Q06418 890 aa13.41□□□□□ -0.26
C4orf3-201ENST00000399075 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
C4orf3-201ENST00000399075 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
C4orf3-201ENST00000399075 TNMDQ9H2S6 317 aa13.41□□□□□ -0.26
C4orf3-201ENST00000399075 H3BQV1 296 aa13.41□□□□□ -0.26
C4orf3-201ENST00000399075 HSPD1P10809 573 aaKnown RBP13.41□□□□□ -0.26
C4orf3-201ENST00000399075 LRRC24Q50LG9 513 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms