RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 ANKIB1Q9P2G1 1089 aa18.36■□□□□ 0.53
SNRNP25-203ENST00000397876 ZBTB12Q9Y330 459 aaPredicted RBP18.36■□□□□ 0.53
SNRNP25-203ENST00000397876 SHTN1A0MZ66 631 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 UFL1O94874 794 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 RPS12P25398 132 aaKnown RBP18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 HIRAP54198 1017 aaPredicted RBP18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 NEXNQ0ZGT2 675 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 GRM1Q13255 1194 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 DOK7Q18PE1 504 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 JARID2Q92833 1246 aaPredicted RBP18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 GPR101Q96P66 508 aaPredicted RBP18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 CCDC85AQ96PX6 553 aaPredicted RBP18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 GGA1Q9UJY5 639 aa18.35■□□□□ 0.53
SNRNP25-203ENST00000397876 IL16Q14005 1332 aa18.34■□□□□ 0.53
SNRNP25-203ENST00000397876 G3V3G9 751 aa18.34■□□□□ 0.53
SNRNP25-203ENST00000397876 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
SNRNP25-203ENST00000397876 DCAF8Q5TAQ9 597 aa18.34■□□□□ 0.53
SNRNP25-203ENST00000397876 CYP4F22Q6NT55 531 aa18.34■□□□□ 0.53
SNRNP25-203ENST00000397876 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
SNRNP25-203ENST00000397876 RTL9Q8NET4 1388 aa18.33■□□□□ 0.53
SNRNP25-203ENST00000397876 ZEB1P37275 1124 aaPredicted RBP18.33■□□□□ 0.52
SNRNP25-203ENST00000397876 ZNF408Q9H9D4 720 aa18.33■□□□□ 0.52
SNRNP25-203ENST00000397876 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
SNRNP25-203ENST00000397876 XDHP47989 1333 aa18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 IGKV5-2P06315 115 aa18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 LBX1P52954 281 aa18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 CTSWP56202 376 aa18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 TBC1D10BQ4KMP7 808 aaPredicted RBP18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 SAMD7Q7Z3H4 446 aa18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 SAPCD2Q86UD0 394 aa18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 CDC5LQ99459 802 aaKnown RBP18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 BEGAINQ9BUH8 593 aa18.32■□□□□ 0.52
SNRNP25-203ENST00000397876 HSPA8P11142 646 aaKnown RBP18.31■□□□□ 0.52
SNRNP25-203ENST00000397876 HHIPL1Q96JK4 782 aa18.31■□□□□ 0.52
SNRNP25-203ENST00000397876 KCNQ5Q9NR82 932 aa18.31■□□□□ 0.52
SNRNP25-203ENST00000397876 MYH3P11055 1940 aa18.31■□□□□ 0.52
SNRNP25-203ENST00000397876 ANP32CO43423 234 aa18.3■□□□□ 0.52
SNRNP25-203ENST00000397876 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
SNRNP25-203ENST00000397876 CWF19L2Q2TBE0 894 aaKnown RBP18.3■□□□□ 0.52
SNRNP25-203ENST00000397876 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
SNRNP25-203ENST00000397876 NEURL1BA8MQ27 555 aa18.29■□□□□ 0.52
SNRNP25-203ENST00000397876 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
SNRNP25-203ENST00000397876 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
SNRNP25-203ENST00000397876 MAP2K2P36507 400 aa18.29■□□□□ 0.52
SNRNP25-203ENST00000397876 G2E3Q7L622 706 aa18.29■□□□□ 0.52
SNRNP25-203ENST00000397876 USP48Q86UV5 1035 aa18.29■□□□□ 0.52
SNRNP25-203ENST00000397876 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 EGFRP00533 1210 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 FLIIQ13045 1269 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 KIF4BQ2VIQ3 1234 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 RBM26Q5T8P6 1007 aaKnown RBP18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 UBE3BQ7Z3V4 1068 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 KRT26Q7Z3Y9 468 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 ZNF609O15014 1411 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 SPEF2Q9C093 1822 aa18.28■□□□□ 0.52
SNRNP25-203ENST00000397876 AOC2O75106 756 aa18.27■□□□□ 0.52
SNRNP25-203ENST00000397876 GREM2Q9H772 168 aa18.27■□□□□ 0.52
SNRNP25-203ENST00000397876 PSME4Q14997 1843 aa18.27■□□□□ 0.52
SNRNP25-203ENST00000397876 FKBP5Q13451 457 aaPredicted RBP18.26■□□□□ 0.51
SNRNP25-203ENST00000397876 RSBN1LQ6PCB5 846 aaPredicted RBP18.26■□□□□ 0.51
SNRNP25-203ENST00000397876 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
SNRNP25-203ENST00000397876 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
SNRNP25-203ENST00000397876 BSDC1Q9NW68 430 aaPredicted RBP18.26■□□□□ 0.51
SNRNP25-203ENST00000397876 MED23Q9ULK4 1368 aa18.26■□□□□ 0.51
SNRNP25-203ENST00000397876 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
SNRNP25-203ENST00000397876 H7C1W4 665 aa18.25■□□□□ 0.51
SNRNP25-203ENST00000397876 HUNKP57058 714 aa18.25■□□□□ 0.51
SNRNP25-203ENST00000397876 PODNQ7Z5L7 613 aa18.25■□□□□ 0.51
SNRNP25-203ENST00000397876 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
SNRNP25-203ENST00000397876 GGA3Q9NZ52 723 aa18.25■□□□□ 0.51
SNRNP25-203ENST00000397876 ADM5C9JUS6 153 aa18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 IGHMBP2P38935 993 aaKnown RBP18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 GCKRQ14397 625 aa18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 SULF1Q8IWU6 871 aa18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 DNAAF4Q8WXU2 420 aa18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 CACNA1FO60840 1977 aa18.24■□□□□ 0.51
SNRNP25-203ENST00000397876 USP17L3A6NCW0 530 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 USP17L4A6NCW7 530 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 CA12O43570 354 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 BRPF1P55201 1214 aaPredicted RBP18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 ZNF280AP59817 542 aaPredicted RBP18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 NOGQ13253 232 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 DLK2Q6UY11 383 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 USP17L1Q7RTZ2 530 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 C2orf69Q8N8R5 385 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 LINS1Q8NG48 757 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 GBA2Q9HCG7 927 aaPredicted RBP18.23■□□□□ 0.51
SNRNP25-203ENST00000397876 USP17L8P0C7I0 530 aa18.22■□□□□ 0.51
SNRNP25-203ENST00000397876 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
SNRNP25-203ENST00000397876 VAMP4O75379 141 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms