RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 KRT32Q14532 448 aa21.78■■□□□ 1.08
CHRFAM7A-202ENST00000397827 Q6ZUG5 572 aa21.77■■□□□ 1.08
CHRFAM7A-202ENST00000397827 RFX7Q2KHR2 1363 aa21.77■■□□□ 1.08
CHRFAM7A-202ENST00000397827 A0A1B0GUL7 405 aa21.77■■□□□ 1.08
CHRFAM7A-202ENST00000397827 MAP7D2Q96T17 732 aa21.77■■□□□ 1.08
CHRFAM7A-202ENST00000397827 BCL11BQ9C0K0 894 aaPredicted RBP21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 JAK2O60674 1132 aa21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 HS1BP3Q53T59 392 aa21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 SMAP1Q8IYB5 467 aaPredicted RBP21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 TMOD3Q9NYL9 352 aa21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 CSPP1Q1MSJ5 1256 aa21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 GIMAP6Q6P9H5 292 aa21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 STOX1Q6ZVD7 989 aa21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 ASAP1Q9ULH1 1129 aa21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 NOL7Q9UMY1 257 aaKnown RBP21.76■■□□□ 1.07
CHRFAM7A-202ENST00000397827 HCLS1P14317 486 aaPredicted RBP21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 HSP90B1P14625 803 aaKnown RBP21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 PDCP20941 246 aa21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 TTC6Q86TZ1 520 aa21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 SH3TC1Q8TE82 1336 aa21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 A0A0G2JLW4 131 aa21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 IFIT1P09914 478 aaKnown RBP21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 GPR108Q9NPR9 543 aa21.75■■□□□ 1.07
CHRFAM7A-202ENST00000397827 SHANK3Q9BYB0 1731 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 TNS2Q63HR2 1409 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 OFD1O75665 1012 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 DNAJC10Q8IXB1 793 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 BRF1Q92994 677 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 GTF3C6Q969F1 213 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 FAM89AQ96GI7 184 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 PRDM10Q9NQV6 1147 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
CHRFAM7A-202ENST00000397827 PAPPAQ13219 1627 aa21.73■■□□□ 1.07
CHRFAM7A-202ENST00000397827 KRT85P78386 507 aa21.73■■□□□ 1.07
CHRFAM7A-202ENST00000397827 TCIRG1Q13488 830 aa21.73■■□□□ 1.07
CHRFAM7A-202ENST00000397827 CCDC57Q2TAC2 916 aa21.73■■□□□ 1.07
CHRFAM7A-202ENST00000397827 BBXQ8WY36 941 aaPredicted RBP21.72■■□□□ 1.07
CHRFAM7A-202ENST00000397827 TFIP11Q9UBB9 837 aaKnown RBP21.72■■□□□ 1.07
CHRFAM7A-202ENST00000397827 LETM1O95202 739 aaPredicted RBP21.72■■□□□ 1.07
CHRFAM7A-202ENST00000397827 PIGBQ92521 554 aa21.72■■□□□ 1.07
CHRFAM7A-202ENST00000397827 DDX11Q96FC9 970 aa21.72■■□□□ 1.07
CHRFAM7A-202ENST00000397827 FKBP4Q02790 459 aaKnown RBP eCLIP21.71■■□□□ 1.07
CHRFAM7A-202ENST00000397827 HELLSQ9NRZ9 838 aa21.71■■□□□ 1.07
CHRFAM7A-202ENST00000397827 CEP126Q9P2H0 1117 aa21.71■■□□□ 1.07
CHRFAM7A-202ENST00000397827 USP25Q9UHP3 1055 aa21.71■■□□□ 1.07
CHRFAM7A-202ENST00000397827 ZMYM1Q5SVZ6 1142 aa21.71■■□□□ 1.07
CHRFAM7A-202ENST00000397827 SYNE4Q8N205 404 aa21.71■■□□□ 1.07
CHRFAM7A-202ENST00000397827 CIAO1O76071 339 aa21.7■■□□□ 1.07
CHRFAM7A-202ENST00000397827 ADORA1P30542 326 aa21.7■■□□□ 1.07
CHRFAM7A-202ENST00000397827 MPNDQ8N594 471 aa21.7■■□□□ 1.07
CHRFAM7A-202ENST00000397827 FAM184AQ8NB25 1140 aa21.7■■□□□ 1.07
CHRFAM7A-202ENST00000397827 KAT6BQ8WYB5 2073 aa21.7■■□□□ 1.07
CHRFAM7A-202ENST00000397827 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
CHRFAM7A-202ENST00000397827 HSPD1P10809 573 aaKnown RBP21.7■■□□□ 1.06
CHRFAM7A-202ENST00000397827 ATG3Q9NT62 314 aa21.7■■□□□ 1.06
CHRFAM7A-202ENST00000397827 MAST3O60307 1309 aa21.7■■□□□ 1.06
CHRFAM7A-202ENST00000397827 SCRN1Q12765 414 aa21.7■■□□□ 1.06
CHRFAM7A-202ENST00000397827 ZKSCAN5Q9Y2L8 839 aa21.7■■□□□ 1.06
CHRFAM7A-202ENST00000397827 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.69■■□□□ 1.06
CHRFAM7A-202ENST00000397827 CCDC39Q9UFE4 941 aa21.69■■□□□ 1.06
CHRFAM7A-202ENST00000397827 R3HCC1Q9Y3T6 440 aaKnown RBP21.69■■□□□ 1.06
CHRFAM7A-202ENST00000397827 ABCA3Q99758 1704 aa21.69■■□□□ 1.06
CHRFAM7A-202ENST00000397827 PDIA4P13667 645 aaKnown RBP21.69■■□□□ 1.06
CHRFAM7A-202ENST00000397827 DSCC1Q9BVC3 393 aa21.69■■□□□ 1.06
CHRFAM7A-202ENST00000397827 RNF113AO15541 343 aaKnown RBP21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 PTMAP06454 111 aaKnown RBP21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 LIG1P18858 919 aa21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 GORABQ5T7V8 394 aa21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 KIF6Q6ZMV9 814 aa21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 CHST3Q7LGC8 479 aa21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 FUCA2Q9BTY2 467 aa21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 M0R2C6 588 aa21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 DHX32Q7L7V1 743 aaKnown RBP21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 BTG4Q9NY30 223 aa21.68■■□□□ 1.06
CHRFAM7A-202ENST00000397827 PPFIA3O75145 1194 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 GPTP24298 496 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 APOBRQ0VD83 1088 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 TTLL5Q6EMB2 1281 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 XAGE2Q96GT9 111 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 CAMK4Q16566 473 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 TAF7LQ5H9L4 462 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 OSBP2Q969R2 916 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 SPATA32Q96LK8 384 aa21.67■■□□□ 1.06
CHRFAM7A-202ENST00000397827 TERF1P54274 439 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 SCARF1Q14162 830 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 HLFQ16534 295 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 UVSSAQ2YD98 709 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 TTC39AQ5SRH9 613 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 LAMA4Q16363 1823 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 STRCQ7RTU9 1775 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 E7EWF7 191 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 FOSBP53539 338 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 CCDC158Q5M9N0 1113 aa21.66■■□□□ 1.06
CHRFAM7A-202ENST00000397827 NAP1L2Q9ULW6 460 aaPredicted RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 ELP1O95163 1332 aa21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 H3BQV1 296 aa21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 PCCAP05165 728 aaPredicted RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 HMGB1P09429 215 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms