RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 AOC3Q16853 763 aa26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 LARGE2Q8N3Y3 721 aa26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 PANK1Q8TE04 598 aa26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 ZNF526Q8TF50 670 aaPredicted RBP26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 ZNF594Q96JF6 807 aaPredicted RBP26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 PODXL2Q9NZ53 605 aa26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 MINPP1Q9UNW1 487 aa26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 COL4A5P29400 1685 aa26.56■■□□□ 1.84
TSPAN4-206ENST00000397408 XDHP47989 1333 aa26.55■■□□□ 1.84
TSPAN4-206ENST00000397408 C6orf229H3BNL8 230 aa26.55■■□□□ 1.84
TSPAN4-206ENST00000397408 MS4A1P11836 297 aa26.55■■□□□ 1.84
TSPAN4-206ENST00000397408 TBC1D16Q8TBP0 767 aa26.55■■□□□ 1.84
TSPAN4-206ENST00000397408 POLLQ9UGP5 575 aa26.55■■□□□ 1.84
TSPAN4-206ENST00000397408 UFL1O94874 794 aa26.54■■□□□ 1.84
TSPAN4-206ENST00000397408 VPS33BQ9H267 617 aa26.54■■□□□ 1.84
TSPAN4-206ENST00000397408 GGA1Q9UJY5 639 aa26.54■■□□□ 1.84
TSPAN4-206ENST00000397408 KIAA2012Q0VF49 1180 aa26.53■■□□□ 1.84
TSPAN4-206ENST00000397408 JDP2Q8WYK2 163 aa26.53■■□□□ 1.84
TSPAN4-206ENST00000397408 GPR101Q96P66 508 aaPredicted RBP26.53■■□□□ 1.84
TSPAN4-206ENST00000397408 LDHAL6AQ6ZMR3 332 aa26.52■■□□□ 1.84
TSPAN4-206ENST00000397408 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.52■■□□□ 1.84
TSPAN4-206ENST00000397408 WASHC4Q2M389 1173 aa26.51■■□□□ 1.83
TSPAN4-206ENST00000397408 NIM1KQ8IY84 436 aa26.51■■□□□ 1.83
TSPAN4-206ENST00000397408 EYA3Q99504 573 aa26.51■■□□□ 1.83
TSPAN4-206ENST00000397408 CNNM1Q9NRU3 951 aa26.51■■□□□ 1.83
TSPAN4-206ENST00000397408 GNAI2P04899 355 aa26.5■■□□□ 1.83
TSPAN4-206ENST00000397408 ATP2B4P23634 1241 aa26.5■■□□□ 1.83
TSPAN4-206ENST00000397408 CHRNDQ07001 517 aa26.5■■□□□ 1.83
TSPAN4-206ENST00000397408 ANKRD2Q9GZV1 360 aa26.5■■□□□ 1.83
TSPAN4-206ENST00000397408 GPBP1L1Q9HC44 474 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-206ENST00000397408 ZNF541Q9H0D2 1346 aa26.49■■□□□ 1.83
TSPAN4-206ENST00000397408 A0A1B0GUL6 1792 aa26.49■■□□□ 1.83
TSPAN4-206ENST00000397408 FZD9O00144 591 aa26.48■■□□□ 1.83
TSPAN4-206ENST00000397408 RIMBP2O15034 1052 aa26.48■■□□□ 1.83
TSPAN4-206ENST00000397408 KLHDC4Q8TBB5 520 aa26.48■■□□□ 1.83
TSPAN4-206ENST00000397408 PUS3Q9BZE2 481 aaKnown RBP26.48■■□□□ 1.83
TSPAN4-206ENST00000397408 KDM2BQ8NHM5 1336 aa26.48■■□□□ 1.83
TSPAN4-206ENST00000397408 GLTPD2A6NH11 291 aa26.48■■□□□ 1.83
TSPAN4-206ENST00000397408 RFX5P48382 616 aaPredicted RBP26.48■■□□□ 1.83
TSPAN4-206ENST00000397408 WTIPA6NIX2 430 aaPredicted RBP26.47■■□□□ 1.83
TSPAN4-206ENST00000397408 ZBTB7BO15156 539 aaPredicted RBP26.47■■□□□ 1.83
TSPAN4-206ENST00000397408 MVPQ14764 893 aaKnown RBP26.47■■□□□ 1.83
TSPAN4-206ENST00000397408 DPY19L2Q6NUT2 758 aa26.47■■□□□ 1.83
TSPAN4-206ENST00000397408 HELBQ8NG08 1087 aaPredicted RBP26.47■■□□□ 1.83
TSPAN4-206ENST00000397408 ZC3H12CQ9C0D7 883 aaKnown RBP26.47■■□□□ 1.83
TSPAN4-206ENST00000397408 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
TSPAN4-206ENST00000397408 C20orf194Q5TEA3 1177 aa26.46■■□□□ 1.83
TSPAN4-206ENST00000397408 LEMD3Q9Y2U8 911 aa26.46■■□□□ 1.83
TSPAN4-206ENST00000397408 TAF5LO75529 589 aa26.45■■□□□ 1.82
TSPAN4-206ENST00000397408 KCNJ4P48050 445 aa26.45■■□□□ 1.82
TSPAN4-206ENST00000397408 EIF6P56537 245 aaKnown RBP26.45■■□□□ 1.82
TSPAN4-206ENST00000397408 PDE3AQ14432 1141 aa26.45■■□□□ 1.82
TSPAN4-206ENST00000397408 LRRC24Q50LG9 513 aa26.45■■□□□ 1.82
TSPAN4-206ENST00000397408 C1orf115Q9H7X2 142 aa26.45■■□□□ 1.82
TSPAN4-206ENST00000397408 ZNRF3Q9ULT6 936 aa26.45■■□□□ 1.82
TSPAN4-206ENST00000397408 MED23Q9ULK4 1368 aa26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 ZNF804BA4D1E1 1349 aa26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 DDNO94850 711 aaPredicted RBP26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 PTPN12Q05209 780 aaKnown RBP26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 MTX1Q13505 466 aa26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 DBNDD1Q9H9R9 158 aa26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 NMRK2Q9NPI5 230 aa26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 RIPOR2Q9Y4F9 1068 aa26.44■■□□□ 1.82
TSPAN4-206ENST00000397408 SRGAP3O43295 1099 aa26.43■■□□□ 1.82
TSPAN4-206ENST00000397408 MROH5Q6ZUA9 1318 aa26.42■■□□□ 1.82
TSPAN4-206ENST00000397408 SNAP23O00161 211 aa26.42■■□□□ 1.82
TSPAN4-206ENST00000397408 DOK7Q18PE1 504 aa26.42■■□□□ 1.82
TSPAN4-206ENST00000397408 DDX19BQ9UMR2 479 aa26.42■■□□□ 1.82
TSPAN4-206ENST00000397408 ECE2O60344 883 aa26.41■■□□□ 1.82
TSPAN4-206ENST00000397408 RRP1P56182 461 aaKnown RBP26.41■■□□□ 1.82
TSPAN4-206ENST00000397408 SIL1Q9H173 461 aa26.41■■□□□ 1.82
TSPAN4-206ENST00000397408 YDJCA8MPS7 323 aa26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 G3V3G9 751 aa26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 EYA2O00167 538 aa26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 KLRK1P26718 216 aa26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 METTL24Q5JXM2 366 aa26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 DCAF8Q5TAQ9 597 aa26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 PA2G4Q9UQ80 394 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 WDR90Q96KV7 1748 aa26.4■■□□□ 1.82
TSPAN4-206ENST00000397408 GJA3Q9Y6H8 435 aa26.39■■□□□ 1.82
TSPAN4-206ENST00000397408 PNMA6EA0A0J9YXQ4 647 aa26.39■■□□□ 1.81
TSPAN4-206ENST00000397408 RAD17O75943 681 aa26.39■■□□□ 1.81
TSPAN4-206ENST00000397408 CXCL9Q07325 125 aa26.39■■□□□ 1.81
TSPAN4-206ENST00000397408 TXNRD3Q86VQ6 643 aa26.39■■□□□ 1.81
TSPAN4-206ENST00000397408 GPC2Q8N158 579 aa26.39■■□□□ 1.81
TSPAN4-206ENST00000397408 RRAGCQ9HB90 399 aa26.39■■□□□ 1.81
TSPAN4-206ENST00000397408 COPRSQ9NQ92 184 aa26.39■■□□□ 1.81
TSPAN4-206ENST00000397408 CIAO1O76071 339 aa26.37■■□□□ 1.81
TSPAN4-206ENST00000397408 CIAPIN1Q6FI81 312 aa26.37■■□□□ 1.81
TSPAN4-206ENST00000397408 ATG9AQ7Z3C6 839 aa26.37■■□□□ 1.81
TSPAN4-206ENST00000397408 L3MBTL3Q96JM7 780 aaPredicted RBP26.37■■□□□ 1.81
TSPAN4-206ENST00000397408 FBXO3Q9UK99 471 aa26.37■■□□□ 1.81
TSPAN4-206ENST00000397408 KIF3CO14782 793 aa26.36■■□□□ 1.81
TSPAN4-206ENST00000397408 VGLL2Q8N8G2 317 aa26.36■■□□□ 1.81
TSPAN4-206ENST00000397408 SCN9AQ15858 1988 aa26.36■■□□□ 1.81
TSPAN4-206ENST00000397408 IRS2Q9Y4H2 1338 aa26.35■■□□□ 1.81
TSPAN4-206ENST00000397408 UBE4AQ14139 1066 aa26.35■■□□□ 1.81
TSPAN4-206ENST00000397408 CHMP4BQ9H444 224 aaKnown RBP26.35■■□□□ 1.81
TSPAN4-206ENST00000397408 PDE8BO95263 885 aa26.34■■□□□ 1.81
TSPAN4-206ENST00000397408 ATP8B2P98198 1209 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms