RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RPS8P62241 208 aaKnown RBP18.3■□□□□ 0.52
CAPN3-207ENST00000397200 ZNF622Q969S3 477 aaKnown RBP eCLIP18.3■□□□□ 0.52
CAPN3-207ENST00000397200 CNNM1Q9NRU3 951 aa18.3■□□□□ 0.52
CAPN3-207ENST00000397200 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
CAPN3-207ENST00000397200 CACNA1SQ13698 1873 aa18.3■□□□□ 0.52
CAPN3-207ENST00000397200 APBB1O00213 710 aa18.29■□□□□ 0.52
CAPN3-207ENST00000397200 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
CAPN3-207ENST00000397200 CIAO1O76071 339 aa18.29■□□□□ 0.52
CAPN3-207ENST00000397200 ALDH1B1P30837 517 aa18.29■□□□□ 0.52
CAPN3-207ENST00000397200 TGFB2P61812 414 aa18.29■□□□□ 0.52
CAPN3-207ENST00000397200 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
CAPN3-207ENST00000397200 ERC1Q8IUD2 1116 aa18.29■□□□□ 0.52
CAPN3-207ENST00000397200 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
CAPN3-207ENST00000397200 LRRC24Q50LG9 513 aa18.28■□□□□ 0.52
CAPN3-207ENST00000397200 PUS3Q9BZE2 481 aaKnown RBP18.28■□□□□ 0.52
CAPN3-207ENST00000397200 KIAA1551Q9HCM1 1747 aa18.28■□□□□ 0.52
CAPN3-207ENST00000397200 BSDC1Q9NW68 430 aaPredicted RBP18.27■□□□□ 0.52
CAPN3-207ENST00000397200 BBOX1O75936 387 aa18.27■□□□□ 0.51
CAPN3-207ENST00000397200 ATG9AQ7Z3C6 839 aa18.27■□□□□ 0.51
CAPN3-207ENST00000397200 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.51
CAPN3-207ENST00000397200 CNKSR1Q969H4 720 aa18.27■□□□□ 0.51
CAPN3-207ENST00000397200 A0A0G2JLW4 131 aa18.26■□□□□ 0.51
CAPN3-207ENST00000397200 DPEP1P16444 411 aa18.26■□□□□ 0.51
CAPN3-207ENST00000397200 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
CAPN3-207ENST00000397200 KIF1BPQ96EK5 621 aa18.26■□□□□ 0.51
CAPN3-207ENST00000397200 LRRCC1Q9C099 1032 aa18.26■□□□□ 0.51
CAPN3-207ENST00000397200 RIPOR2Q9Y4F9 1068 aa18.26■□□□□ 0.51
CAPN3-207ENST00000397200 METTL24Q5JXM2 366 aa18.25■□□□□ 0.51
CAPN3-207ENST00000397200 TMC4Q7Z404 712 aa18.25■□□□□ 0.51
CAPN3-207ENST00000397200 MROH5Q6ZUA9 1318 aa18.25■□□□□ 0.51
CAPN3-207ENST00000397200 PPEF1O14829 653 aaPredicted RBP18.24■□□□□ 0.51
CAPN3-207ENST00000397200 SASH1O94885 1247 aa18.24■□□□□ 0.51
CAPN3-207ENST00000397200 CEP126Q9P2H0 1117 aa18.24■□□□□ 0.51
CAPN3-207ENST00000397200 A0A1B0GUL6 1792 aa18.24■□□□□ 0.51
CAPN3-207ENST00000397200 GSPT1P15170 499 aaKnown RBP18.23■□□□□ 0.51
CAPN3-207ENST00000397200 TFCP2Q12800 502 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 TTC22Q5TAA0 569 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 SMARCA5O60264 1052 aaPredicted RBP18.23■□□□□ 0.51
CAPN3-207ENST00000397200 KCNA3P22001 575 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 RBM25P49756 843 aaKnown RBP18.23■□□□□ 0.51
CAPN3-207ENST00000397200 CHRNDQ07001 517 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
CAPN3-207ENST00000397200 TTLL6Q8N841 843 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 MINPP1Q9UNW1 487 aa18.23■□□□□ 0.51
CAPN3-207ENST00000397200 BRCA1P38398 1863 aaKnown RBP18.23■□□□□ 0.51
CAPN3-207ENST00000397200 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
CAPN3-207ENST00000397200 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
CAPN3-207ENST00000397200 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
CAPN3-207ENST00000397200 SALL3Q9BXA9 1300 aa18.22■□□□□ 0.51
CAPN3-207ENST00000397200 MFAP1P55081 439 aaKnown RBP18.21■□□□□ 0.51
CAPN3-207ENST00000397200 SP8Q8IXZ3 490 aa18.21■□□□□ 0.51
CAPN3-207ENST00000397200 CLASRPQ8N2M8 674 aaKnown RBP18.21■□□□□ 0.51
CAPN3-207ENST00000397200 HELBQ8NG08 1087 aaPredicted RBP18.21■□□□□ 0.51
CAPN3-207ENST00000397200 FHDC1Q9C0D6 1143 aaPredicted RBP18.21■□□□□ 0.51
CAPN3-207ENST00000397200 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
CAPN3-207ENST00000397200 TMX4Q9H1E5 349 aaPredicted RBP18.21■□□□□ 0.51
CAPN3-207ENST00000397200 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
CAPN3-207ENST00000397200 BECN1Q14457 450 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 NLGN2Q8NFZ4 835 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 DAXXQ9UER7 740 aaPredicted RBP18.2■□□□□ 0.5
CAPN3-207ENST00000397200 AKAP2Q9Y2D5 859 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 CDC45O75419 566 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 TAF5LO75529 589 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 PDE8BO95263 885 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
CAPN3-207ENST00000397200 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.2■□□□□ 0.5
CAPN3-207ENST00000397200 EIF5BO60841 1220 aaKnown RBP18.19■□□□□ 0.5
CAPN3-207ENST00000397200 SLC4A3P48751 1232 aa18.19■□□□□ 0.5
CAPN3-207ENST00000397200 GPR108Q9NPR9 543 aa18.19■□□□□ 0.5
CAPN3-207ENST00000397200 ANKIB1Q9P2G1 1089 aa18.19■□□□□ 0.5
CAPN3-207ENST00000397200 ZNF609O15014 1411 aa18.18■□□□□ 0.5
CAPN3-207ENST00000397200 XDHP47989 1333 aa18.18■□□□□ 0.5
CAPN3-207ENST00000397200 PUM3Q15397 648 aaKnown RBP18.18■□□□□ 0.5
CAPN3-207ENST00000397200 TNNI3KQ59H18 835 aa18.18■□□□□ 0.5
CAPN3-207ENST00000397200 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
CAPN3-207ENST00000397200 SLC51AQ86UW1 340 aa18.18■□□□□ 0.5
CAPN3-207ENST00000397200 AACSQ86V21 672 aa18.18■□□□□ 0.5
CAPN3-207ENST00000397200 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
CAPN3-207ENST00000397200 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
CAPN3-207ENST00000397200 FPGT-TNNI3KV9GXZ4 949 aa18.18■□□□□ 0.5
CAPN3-207ENST00000397200 KCNJ4P48050 445 aa18.17■□□□□ 0.5
CAPN3-207ENST00000397200 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
CAPN3-207ENST00000397200 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
CAPN3-207ENST00000397200 AK9Q5TCS8 1911 aa18.17■□□□□ 0.5
CAPN3-207ENST00000397200 IFIT2P09913 472 aaKnown RBP18.16■□□□□ 0.5
CAPN3-207ENST00000397200 GPSM2P81274 684 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 EAF2Q96CJ1 260 aaPredicted RBP18.16■□□□□ 0.5
CAPN3-207ENST00000397200 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 NSFL1CQ9UNZ2 370 aaKnown RBP18.16■□□□□ 0.5
CAPN3-207ENST00000397200 ARAP2Q8WZ64 1704 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 A0A1B0GUL7 405 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 C21orf2O43822 256 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 CC2D2BQ6DHV5 1058 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms