RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 LDHAL6AQ6ZMR3 332 aa36.74■■■■□ 3.47
CHCHD4-202ENST00000396914 MINPP1Q9UNW1 487 aa36.74■■■■□ 3.47
CHCHD4-202ENST00000396914 PDE3AQ14432 1141 aa36.73■■■■□ 3.47
CHCHD4-202ENST00000396914 MVPQ14764 893 aaKnown RBP36.73■■■■□ 3.47
CHCHD4-202ENST00000396914 C20orf194Q5TEA3 1177 aa36.73■■■■□ 3.47
CHCHD4-202ENST00000396914 ZBTB7BO15156 539 aaPredicted RBP36.72■■■■□ 3.47
CHCHD4-202ENST00000396914 RRP1P56182 461 aaKnown RBP36.71■■■■□ 3.47
CHCHD4-202ENST00000396914 XDHP47989 1333 aa36.7■■■■□ 3.47
CHCHD4-202ENST00000396914 PPIP5K2O43314 1243 aa36.7■■■■□ 3.47
CHCHD4-202ENST00000396914 UFL1O94874 794 aa36.7■■■■□ 3.47
CHCHD4-202ENST00000396914 LARGE2Q8N3Y3 721 aa36.7■■■■□ 3.47
CHCHD4-202ENST00000396914 RTFDC1Q9BY42 306 aaPredicted RBP36.7■■■■□ 3.47
CHCHD4-202ENST00000396914 GGA1Q9UJY5 639 aa36.7■■■■□ 3.47
CHCHD4-202ENST00000396914 C1orf115Q9H7X2 142 aa36.69■■■■□ 3.46
CHCHD4-202ENST00000396914 DDX19BQ9UMR2 479 aa36.69■■■■□ 3.46
CHCHD4-202ENST00000396914 AOC3Q16853 763 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 KLHDC4Q8TBB5 520 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 ANKRD2Q9GZV1 360 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 CHRNDQ07001 517 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 TBC1D16Q8TBP0 767 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 JDP2Q8WYK2 163 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 PODXL2Q9NZ53 605 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 POLLQ9UGP5 575 aa36.68■■■■□ 3.46
CHCHD4-202ENST00000396914 EYA3Q99504 573 aa36.67■■■■□ 3.46
CHCHD4-202ENST00000396914 RIMBP2O15034 1052 aa36.66■■■■□ 3.46
CHCHD4-202ENST00000396914 SRGAP3O43295 1099 aa36.66■■■■□ 3.46
CHCHD4-202ENST00000396914 WASHC4Q2M389 1173 aa36.66■■■■□ 3.46
CHCHD4-202ENST00000396914 GPR101Q96P66 508 aaPredicted RBP36.66■■■■□ 3.46
CHCHD4-202ENST00000396914 TIAM2Q8IVF5 1701 aa36.65■■■■□ 3.46
CHCHD4-202ENST00000396914 ATP2B4P23634 1241 aa36.65■■■■□ 3.46
CHCHD4-202ENST00000396914 KCNJ4P48050 445 aa36.65■■■■□ 3.46
CHCHD4-202ENST00000396914 HELBQ8NG08 1087 aaPredicted RBP36.65■■■■□ 3.46
CHCHD4-202ENST00000396914 PUS3Q9BZE2 481 aaKnown RBP36.65■■■■□ 3.46
CHCHD4-202ENST00000396914 DUOX1Q9NRD9 1551 aa36.64■■■■□ 3.46
CHCHD4-202ENST00000396914 ZNF526Q8TF50 670 aaPredicted RBP36.64■■■■□ 3.46
CHCHD4-202ENST00000396914 VPS33BQ9H267 617 aa36.64■■■■□ 3.46
CHCHD4-202ENST00000396914 CHMP4BQ9H444 224 aaKnown RBP36.64■■■■□ 3.46
CHCHD4-202ENST00000396914 DICER1Q9UPY3 1922 aaKnown RBP36.64■■■■□ 3.46
CHCHD4-202ENST00000396914 NIM1KQ8IY84 436 aa36.63■■■■□ 3.45
CHCHD4-202ENST00000396914 ZC3H12CQ9C0D7 883 aaKnown RBP36.62■■■■□ 3.45
CHCHD4-202ENST00000396914 SIL1Q9H173 461 aa36.62■■■■□ 3.45
CHCHD4-202ENST00000396914 TAF5LO75529 589 aa36.61■■■■□ 3.45
CHCHD4-202ENST00000396914 RFX5P48382 616 aaPredicted RBP36.61■■■■□ 3.45
CHCHD4-202ENST00000396914 KIAA2012Q0VF49 1180 aa36.61■■■■□ 3.45
CHCHD4-202ENST00000396914 LTBP1Q14766 1721 aa36.6■■■■□ 3.45
CHCHD4-202ENST00000396914 G3V3G9 751 aa36.6■■■■□ 3.45
CHCHD4-202ENST00000396914 PTPN12Q05209 780 aaKnown RBP36.6■■■■□ 3.45
CHCHD4-202ENST00000396914 LRRC24Q50LG9 513 aa36.6■■■■□ 3.45
CHCHD4-202ENST00000396914 DCAF8Q5TAQ9 597 aa36.6■■■■□ 3.45
CHCHD4-202ENST00000396914 ZC3H4Q9UPT8 1303 aaKnown RBP36.6■■■■□ 3.45
CHCHD4-202ENST00000396914 LEMD3Q9Y2U8 911 aa36.59■■■■□ 3.45
CHCHD4-202ENST00000396914 MTX1Q13505 466 aa36.59■■■■□ 3.45
CHCHD4-202ENST00000396914 METTL24Q5JXM2 366 aa36.59■■■■□ 3.45
CHCHD4-202ENST00000396914 MROH5Q6ZUA9 1318 aa36.58■■■■□ 3.45
CHCHD4-202ENST00000396914 WTIPA6NIX2 430 aaPredicted RBP36.58■■■■□ 3.45
CHCHD4-202ENST00000396914 PA2G4Q9UQ80 394 aaKnown RBP36.58■■■■□ 3.45
CHCHD4-202ENST00000396914 RIPOR2Q9Y4F9 1068 aa36.58■■■■□ 3.45
CHCHD4-202ENST00000396914 ZNF804BA4D1E1 1349 aa36.57■■■■□ 3.45
CHCHD4-202ENST00000396914 PNMA6EA0A0J9YXQ4 647 aa36.56■■■■□ 3.44
CHCHD4-202ENST00000396914 EYA2O00167 538 aa36.56■■■■□ 3.44
CHCHD4-202ENST00000396914 DPY19L2Q6NUT2 758 aa36.56■■■■□ 3.44
CHCHD4-202ENST00000396914 EIF6P56537 245 aaKnown RBP36.55■■■■□ 3.44
CHCHD4-202ENST00000396914 DOK7Q18PE1 504 aa36.55■■■■□ 3.44
CHCHD4-202ENST00000396914 SUPT16HQ9Y5B9 1047 aaKnown RBP36.55■■■■□ 3.44
CHCHD4-202ENST00000396914 COL4A5P29400 1685 aa36.55■■■■□ 3.44
CHCHD4-202ENST00000396914 ATP8B2P98198 1209 aa36.54■■■■□ 3.44
CHCHD4-202ENST00000396914 DBNDD1Q9H9R9 158 aa36.54■■■■□ 3.44
CHCHD4-202ENST00000396914 ZBTB40Q9NUA8 1239 aa36.54■■■■□ 3.44
CHCHD4-202ENST00000396914 SNAP23O00161 211 aa36.53■■■■□ 3.44
CHCHD4-202ENST00000396914 ZNF784Q8NCA9 323 aaPredicted RBP36.52■■■■□ 3.44
CHCHD4-202ENST00000396914 COPRSQ9NQ92 184 aa36.52■■■■□ 3.44
CHCHD4-202ENST00000396914 ZNRF3Q9ULT6 936 aa36.52■■■■□ 3.44
CHCHD4-202ENST00000396914 KDM2BQ8NHM5 1336 aa36.52■■■■□ 3.44
CHCHD4-202ENST00000396914 FZD9O00144 591 aa36.51■■■■□ 3.44
CHCHD4-202ENST00000396914 A0A1B0GUL6 1792 aa36.51■■■■□ 3.43
CHCHD4-202ENST00000396914 GLTPD2A6NH11 291 aa36.51■■■■□ 3.43
CHCHD4-202ENST00000396914 CEP85Q6P2H3 762 aa36.51■■■■□ 3.43
CHCHD4-202ENST00000396914 GPBP1L1Q9HC44 474 aaPredicted RBP36.51■■■■□ 3.43
CHCHD4-202ENST00000396914 FBXO3Q9UK99 471 aa36.51■■■■□ 3.43
CHCHD4-202ENST00000396914 MED23Q9ULK4 1368 aa36.5■■■■□ 3.43
CHCHD4-202ENST00000396914 ZNF541Q9H0D2 1346 aa36.5■■■■□ 3.43
CHCHD4-202ENST00000396914 CIAO1O76071 339 aa36.5■■■■□ 3.43
CHCHD4-202ENST00000396914 GJA3Q9Y6H8 435 aa36.5■■■■□ 3.43
CHCHD4-202ENST00000396914 ECE2O60344 883 aa36.49■■■■□ 3.43
CHCHD4-202ENST00000396914 KLRK1P26718 216 aa36.48■■■■□ 3.43
CHCHD4-202ENST00000396914 ATG9AQ7Z3C6 839 aa36.48■■■■□ 3.43
CHCHD4-202ENST00000396914 DDNO94850 711 aaPredicted RBP36.47■■■■□ 3.43
CHCHD4-202ENST00000396914 PDE8BO95263 885 aa36.47■■■■□ 3.43
CHCHD4-202ENST00000396914 IL15P40933 162 aaPredicted RBP36.47■■■■□ 3.43
CHCHD4-202ENST00000396914 CRBNQ96SW2 442 aa36.47■■■■□ 3.43
CHCHD4-202ENST00000396914 G3BP1Q13283 466 aaKnown RBP eCLIP36.46■■■■□ 3.43
CHCHD4-202ENST00000396914 POLA2Q14181 598 aa36.46■■■■□ 3.43
CHCHD4-202ENST00000396914 TXNRD3Q86VQ6 643 aa36.46■■■■□ 3.43
CHCHD4-202ENST00000396914 SSH3Q8TE77 659 aa36.46■■■■□ 3.43
CHCHD4-202ENST00000396914 CEP126Q9P2H0 1117 aa36.46■■■■□ 3.43
CHCHD4-202ENST00000396914 RAD17O75943 681 aa36.45■■■■□ 3.43
CHCHD4-202ENST00000396914 OS9Q13438 667 aaPredicted RBP36.45■■■■□ 3.43
CHCHD4-202ENST00000396914 UBE4AQ14139 1066 aa36.45■■■■□ 3.43
CHCHD4-202ENST00000396914 RPAP2Q8IXW5 612 aaPredicted RBP36.43■■■■□ 3.42
CHCHD4-202ENST00000396914 YDJCA8MPS7 323 aa36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms