RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 WTIPA6NIX2 430 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-202ENST00000396828 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.28
NEDD8-202ENST00000396828 GNAI1P63096 354 aa13.33□□□□□ -0.28
NEDD8-202ENST00000396828 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
NEDD8-202ENST00000396828 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
NEDD8-202ENST00000396828 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-202ENST00000396828 TBC1D16Q8TBP0 767 aa13.33□□□□□ -0.28
NEDD8-202ENST00000396828 TSKSQ9UJT2 592 aa13.33□□□□□ -0.28
NEDD8-202ENST00000396828 ECE2O60344 883 aa13.32□□□□□ -0.28
NEDD8-202ENST00000396828 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-202ENST00000396828 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
NEDD8-202ENST00000396828 TBC1D10BQ4KMP7 808 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-202ENST00000396828 USP48Q86UV5 1035 aa13.32□□□□□ -0.28
NEDD8-202ENST00000396828 ZIC5Q96T25 663 aa13.32□□□□□ -0.28
NEDD8-202ENST00000396828 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
NEDD8-202ENST00000396828 CDHR2Q9BYE9 1310 aa13.32□□□□□ -0.28
NEDD8-202ENST00000396828 H7C1D1 291 aa13.31□□□□□ -0.28
NEDD8-202ENST00000396828 HNRNPUQ00839 825 aaKnown RBP eCLIP13.31□□□□□ -0.28
NEDD8-202ENST00000396828 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
NEDD8-202ENST00000396828 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
NEDD8-202ENST00000396828 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
NEDD8-202ENST00000396828 ASTN2O75129 1339 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-202ENST00000396828 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-202ENST00000396828 IGKV5-2P06315 115 aa13.3□□□□□ -0.28
NEDD8-202ENST00000396828 ECE1P42892 770 aa13.3□□□□□ -0.28
NEDD8-202ENST00000396828 CDC37L1Q7L3B6 337 aa13.3□□□□□ -0.28
NEDD8-202ENST00000396828 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
NEDD8-202ENST00000396828 DPF2Q92785 391 aa13.3□□□□□ -0.28
NEDD8-202ENST00000396828 METTL22Q9BUU2 404 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-202ENST00000396828 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
NEDD8-202ENST00000396828 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
NEDD8-202ENST00000396828 ADM5C9JUS6 153 aa13.29□□□□□ -0.28
NEDD8-202ENST00000396828 G2E3Q7L622 706 aa13.29□□□□□ -0.28
NEDD8-202ENST00000396828 CWC25Q9NXE8 425 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-202ENST00000396828 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
NEDD8-202ENST00000396828 PDE8AO60658 829 aa13.28□□□□□ -0.28
NEDD8-202ENST00000396828 UFL1O94874 794 aa13.28□□□□□ -0.28
NEDD8-202ENST00000396828 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
NEDD8-202ENST00000396828 EYA3Q99504 573 aa13.28□□□□□ -0.28
NEDD8-202ENST00000396828 ANKIB1Q9P2G1 1089 aa13.28□□□□□ -0.28
NEDD8-202ENST00000396828 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.29
NEDD8-202ENST00000396828 MAP2K2P36507 400 aa13.27□□□□□ -0.29
NEDD8-202ENST00000396828 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.29
NEDD8-202ENST00000396828 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.29
NEDD8-202ENST00000396828 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
NEDD8-202ENST00000396828 CCDC30Q5VVM6 783 aa13.27□□□□□ -0.29
NEDD8-202ENST00000396828 ABHD8Q96I13 439 aa13.27□□□□□ -0.29
NEDD8-202ENST00000396828 HHIPL1Q96JK4 782 aa13.27□□□□□ -0.29
NEDD8-202ENST00000396828 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
NEDD8-202ENST00000396828 SPEF2Q9C093 1822 aa13.27□□□□□ -0.29
NEDD8-202ENST00000396828 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
NEDD8-202ENST00000396828 HUNKP57058 714 aa13.26□□□□□ -0.29
NEDD8-202ENST00000396828 KSR2Q6VAB6 950 aa13.26□□□□□ -0.29
NEDD8-202ENST00000396828 KRT26Q7Z3Y9 468 aa13.26□□□□□ -0.29
NEDD8-202ENST00000396828 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
NEDD8-202ENST00000396828 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
NEDD8-202ENST00000396828 GREM2Q9H772 168 aa13.26□□□□□ -0.29
NEDD8-202ENST00000396828 GGA1Q9UJY5 639 aa13.26□□□□□ -0.29
NEDD8-202ENST00000396828 SCAF8Q9UPN6 1271 aaKnown RBP13.26□□□□□ -0.29
NEDD8-202ENST00000396828 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
NEDD8-202ENST00000396828 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
NEDD8-202ENST00000396828 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-202ENST00000396828 CTSWP56202 376 aa13.25□□□□□ -0.29
NEDD8-202ENST00000396828 KIF4BQ2VIQ3 1234 aa13.25□□□□□ -0.29
NEDD8-202ENST00000396828 BEGAINQ9BUH8 593 aa13.25□□□□□ -0.29
NEDD8-202ENST00000396828 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
NEDD8-202ENST00000396828 PSME4Q14997 1843 aa13.25□□□□□ -0.29
NEDD8-202ENST00000396828 TNRC18O15417 2968 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-202ENST00000396828 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-202ENST00000396828 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-202ENST00000396828 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
NEDD8-202ENST00000396828 DCPSQ96C86 337 aaKnown RBP13.24□□□□□ -0.29
NEDD8-202ENST00000396828 GMLQ99445 158 aa13.24□□□□□ -0.29
NEDD8-202ENST00000396828 GGA3Q9NZ52 723 aa13.24□□□□□ -0.29
NEDD8-202ENST00000396828 ZNF646O15015 1829 aaPredicted RBP13.24□□□□□ -0.29
NEDD8-202ENST00000396828 MYH3P11055 1940 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 XDHP47989 1333 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-202ENST00000396828 ZNF280AP59817 542 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-202ENST00000396828 SCARF1Q14162 830 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-202ENST00000396828 TXNRD3Q86VQ6 643 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 GBA2Q9HCG7 927 aaPredicted RBP13.23□□□□□ -0.29
NEDD8-202ENST00000396828 MINPP1Q9UNW1 487 aa13.23□□□□□ -0.29
NEDD8-202ENST00000396828 G3V3G9 751 aa13.22□□□□□ -0.29
NEDD8-202ENST00000396828 H7C1W4 665 aa13.22□□□□□ -0.29
NEDD8-202ENST00000396828 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
NEDD8-202ENST00000396828 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
NEDD8-202ENST00000396828 ATP2B4P23634 1241 aa13.22□□□□□ -0.29
NEDD8-202ENST00000396828 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
NEDD8-202ENST00000396828 ANGEL2Q5VTE6 544 aaKnown RBP13.22□□□□□ -0.29
NEDD8-202ENST00000396828 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
NEDD8-202ENST00000396828 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
NEDD8-202ENST00000396828 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
NEDD8-202ENST00000396828 KLRK1P26718 216 aa13.21□□□□□ -0.29
NEDD8-202ENST00000396828 CASP7P55210 303 aa13.21□□□□□ -0.29
NEDD8-202ENST00000396828 NOGQ13253 232 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms