RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 CBX8Q9HC52 389 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 ZNF142P52746 1687 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-204ENST00000395906 FOXO3O43524 673 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 GSPT1P15170 499 aaKnown RBP11.25□□□□□ -0.61
CDRT1-204ENST00000395906 NF2P35240 595 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 CCZ1BP86790 482 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 CCZ1P86791 482 aaPredicted RBP11.25□□□□□ -0.61
CDRT1-204ENST00000395906 SCRN1Q12765 414 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 CCDC30Q5VVM6 783 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
CDRT1-204ENST00000395906 NEK4P51957 841 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 RWDD2BP57060 319 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 ICA1Q05084 483 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 GPR161Q8N6U8 529 aaKnown RBP11.24□□□□□ -0.61
CDRT1-204ENST00000395906 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 ZNF483Q8TF39 744 aaPredicted RBP11.24□□□□□ -0.61
CDRT1-204ENST00000395906 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
CDRT1-204ENST00000395906 SRGAP3O43295 1099 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 NEFHP12036 1026 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 MAP3K11Q16584 847 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 WWC2Q6AWC2 1192 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
CDRT1-204ENST00000395906 ZNF335Q9H4Z2 1342 aaPredicted RBP11.24□□□□□ -0.61
CDRT1-204ENST00000395906 MAP2K7O14733 419 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 RDXP35241 583 aaKnown RBP11.23□□□□□ -0.61
CDRT1-204ENST00000395906 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
CDRT1-204ENST00000395906 SPATS2LQ9NUQ6 558 aaKnown RBP11.23□□□□□ -0.61
CDRT1-204ENST00000395906 RRP7AQ9Y3A4 280 aaKnown RBP11.23□□□□□ -0.61
CDRT1-204ENST00000395906 CCDC69A6NI79 296 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 CCDC27Q2M243 656 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 TPRNQ4KMQ1 711 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 MSL3Q8N5Y2 521 aaKnown RBP11.23□□□□□ -0.61
CDRT1-204ENST00000395906 KLHL23Q8NBE8 558 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 ARMC2Q8NEN0 867 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 IQSEC2Q5JU85 1478 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 MYBL2P10244 700 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 LIG3P49916 1009 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
CDRT1-204ENST00000395906 APOBRQ0VD83 1088 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 FBXW10Q5XX13 1052 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 MRFAP1L1Q96HT8 127 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 AKAP2Q9Y2D5 859 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 ATP6V1DQ9Y5K8 247 aa11.23□□□□□ -0.61
CDRT1-204ENST00000395906 SOS1Q07889 1333 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 CCNHP51946 323 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 EVCP57679 992 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 LRRFIP1Q32MZ4 808 aaKnown RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 PREPLQ4J6C6 727 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 ANO6Q4KMQ2 910 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 TTC22Q5TAA0 569 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 CABS1Q96KC9 395 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 CPSF1Q10570 1443 aaKnown RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 PSDA5PKW4 1024 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 KINO60870 393 aaKnown RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 RTN2O75298 545 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 SARM1Q6SZW1 724 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 PRPF38AQ8NAV1 312 aaKnown RBP11.22□□□□□ -0.61
CDRT1-204ENST00000395906 PPP1R13BQ96KQ4 1090 aa11.22□□□□□ -0.61
CDRT1-204ENST00000395906 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.61
CDRT1-204ENST00000395906 CHD2O14647 1828 aaKnown RBP11.21□□□□□ -0.61
CDRT1-204ENST00000395906 TTC41PQ6P2S7 1318 aa11.21□□□□□ -0.61
CDRT1-204ENST00000395906 ZSCAN22P10073 491 aaPredicted RBP11.21□□□□□ -0.61
CDRT1-204ENST00000395906 LONRF2Q1L5Z9 754 aa11.21□□□□□ -0.61
CDRT1-204ENST00000395906 C1QTNF12Q5T7M4 302 aa11.21□□□□□ -0.61
CDRT1-204ENST00000395906 KCNB2Q92953 911 aa11.21□□□□□ -0.61
CDRT1-204ENST00000395906 COG3Q96JB2 828 aa11.21□□□□□ -0.61
CDRT1-204ENST00000395906 BAG1Q99933 345 aaPredicted RBP11.21□□□□□ -0.61
CDRT1-204ENST00000395906 TMEM94Q12767 1356 aa11.21□□□□□ -0.62
CDRT1-204ENST00000395906 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.62
CDRT1-204ENST00000395906 CHUKO15111 745 aa11.21□□□□□ -0.62
CDRT1-204ENST00000395906 FIBPO43427 364 aa11.21□□□□□ -0.62
CDRT1-204ENST00000395906 CCT2P78371 535 aaKnown RBP11.21□□□□□ -0.62
CDRT1-204ENST00000395906 RBBP5Q15291 538 aaKnown RBP11.21□□□□□ -0.62
CDRT1-204ENST00000395906 PLEKHM2Q8IWE5 1019 aa11.21□□□□□ -0.62
CDRT1-204ENST00000395906 NUP62CLQ9H1M0 184 aa11.21□□□□□ -0.62
CDRT1-204ENST00000395906 ODF2LQ9ULJ1 636 aa11.21□□□□□ -0.62
CDRT1-204ENST00000395906 DIP2AQ14689 1571 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 EXOC5O00471 708 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 GSDMDP57764 484 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 NLRP6P59044 892 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 GNAI1P63096 354 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 CCDC96Q2M329 555 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 ANKRD18AQ8IVF6 992 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 PDE11AQ9HCR9 933 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 DNAI1Q9UI46 699 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 NOB1Q9ULX3 412 aaKnown RBP11.2□□□□□ -0.62
CDRT1-204ENST00000395906 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms