RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZBTB12Q9Y330 459 aaPredicted RBP23.16■■□□□ 1.3
CXCL12-204ENST00000395793 PSME4Q14997 1843 aa23.16■■□□□ 1.3
CXCL12-204ENST00000395793 ECE2O60344 883 aa23.15■■□□□ 1.3
CXCL12-204ENST00000395793 HSP90B1P14625 803 aaKnown RBP23.15■■□□□ 1.3
CXCL12-204ENST00000395793 CTSWP56202 376 aa23.15■■□□□ 1.3
CXCL12-204ENST00000395793 DOK7Q18PE1 504 aa23.15■■□□□ 1.3
CXCL12-204ENST00000395793 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
CXCL12-204ENST00000395793 EXOSC9Q06265 439 aaKnown RBP23.14■■□□□ 1.29
CXCL12-204ENST00000395793 FLIIQ13045 1269 aa23.14■■□□□ 1.29
CXCL12-204ENST00000395793 CNOT7Q9UIV1 285 aaKnown RBP23.14■■□□□ 1.29
CXCL12-204ENST00000395793 THSD7BQ9C0I4 1608 aa23.14■■□□□ 1.29
CXCL12-204ENST00000395793 VAMP4O75379 141 aa23.13■■□□□ 1.29
CXCL12-204ENST00000395793 UFL1O94874 794 aa23.13■■□□□ 1.29
CXCL12-204ENST00000395793 NEXNQ0ZGT2 675 aa23.13■■□□□ 1.29
CXCL12-204ENST00000395793 CST9Q5W186 159 aa23.13■■□□□ 1.29
CXCL12-204ENST00000395793 EYA3Q99504 573 aa23.13■■□□□ 1.29
CXCL12-204ENST00000395793 PGAP2Q9UHJ9 254 aa23.13■■□□□ 1.29
CXCL12-204ENST00000395793 MICALL2Q8IY33 904 aa23.12■■□□□ 1.29
CXCL12-204ENST00000395793 TTLL11Q8NHH1 800 aa23.12■■□□□ 1.29
CXCL12-204ENST00000395793 GLIS2Q9BZE0 524 aaPredicted RBP23.12■■□□□ 1.29
CXCL12-204ENST00000395793 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
CXCL12-204ENST00000395793 H7C1W4 665 aa23.11■■□□□ 1.29
CXCL12-204ENST00000395793 UBE3BQ7Z3V4 1068 aa23.11■■□□□ 1.29
CXCL12-204ENST00000395793 ANKRD18AQ8IVF6 992 aa23.11■■□□□ 1.29
CXCL12-204ENST00000395793 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
CXCL12-204ENST00000395793 GREM2Q9H772 168 aa23.11■■□□□ 1.29
CXCL12-204ENST00000395793 ANKIB1Q9P2G1 1089 aa23.11■■□□□ 1.29
CXCL12-204ENST00000395793 GGA1Q9UJY5 639 aa23.11■■□□□ 1.29
CXCL12-204ENST00000395793 ABT1Q9ULW3 272 aaKnown RBP23.11■■□□□ 1.29
CXCL12-204ENST00000395793 POLR2AP24928 1970 aaKnown RBP23.1■■□□□ 1.29
CXCL12-204ENST00000395793 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
CXCL12-204ENST00000395793 EGFRP00533 1210 aa23.1■■□□□ 1.29
CXCL12-204ENST00000395793 CASP7P55210 303 aa23.1■■□□□ 1.29
CXCL12-204ENST00000395793 DEFB115Q30KQ5 88 aa23.1■■□□□ 1.29
CXCL12-204ENST00000395793 DPF2Q92785 391 aa23.1■■□□□ 1.29
CXCL12-204ENST00000395793 FOXN1O15353 648 aa23.09■■□□□ 1.29
CXCL12-204ENST00000395793 FKBP5Q13451 457 aaPredicted RBP23.09■■□□□ 1.29
CXCL12-204ENST00000395793 GCKRQ14397 625 aa23.09■■□□□ 1.29
CXCL12-204ENST00000395793 SAMD7Q7Z3H4 446 aa23.09■■□□□ 1.29
CXCL12-204ENST00000395793 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
CXCL12-204ENST00000395793 XDHP47989 1333 aa23.08■■□□□ 1.29
CXCL12-204ENST00000395793 ZC3H12CQ9C0D7 883 aaKnown RBP23.08■■□□□ 1.29
CXCL12-204ENST00000395793 H7C1D1 291 aa23.07■■□□□ 1.28
CXCL12-204ENST00000395793 ZC3H15Q8WU90 426 aaKnown RBP23.07■■□□□ 1.28
CXCL12-204ENST00000395793 CDC5LQ99459 802 aaKnown RBP23.07■■□□□ 1.28
CXCL12-204ENST00000395793 WDR33Q9C0J8 1336 aaKnown RBP23.07■■□□□ 1.28
CXCL12-204ENST00000395793 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
CXCL12-204ENST00000395793 TBC1D10BQ4KMP7 808 aaPredicted RBP23.06■■□□□ 1.28
CXCL12-204ENST00000395793 DLK2Q6UY11 383 aa23.06■■□□□ 1.28
CXCL12-204ENST00000395793 PLA2G12BQ9BX93 195 aa23.06■■□□□ 1.28
CXCL12-204ENST00000395793 TLL2Q9Y6L7 1015 aa23.06■■□□□ 1.28
CXCL12-204ENST00000395793 F6X3S4 739 aa23.05■■□□□ 1.28
CXCL12-204ENST00000395793 VIL1P09327 827 aaKnown RBP23.05■■□□□ 1.28
CXCL12-204ENST00000395793 RPS12P25398 132 aaKnown RBP23.05■■□□□ 1.28
CXCL12-204ENST00000395793 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
CXCL12-204ENST00000395793 BSDC1Q9NW68 430 aaPredicted RBP23.05■■□□□ 1.28
CXCL12-204ENST00000395793 WBP1LQ9NX94 342 aa23.05■■□□□ 1.28
CXCL12-204ENST00000395793 MINPP1Q9UNW1 487 aa23.05■■□□□ 1.28
CXCL12-204ENST00000395793 ZNF609O15014 1411 aa23.05■■□□□ 1.28
CXCL12-204ENST00000395793 CELF2O95319 508 aaKnown RBP23.04■■□□□ 1.28
CXCL12-204ENST00000395793 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
CXCL12-204ENST00000395793 CYP4F22Q6NT55 531 aa23.04■■□□□ 1.28
CXCL12-204ENST00000395793 TNS4Q8IZW8 715 aa23.04■■□□□ 1.28
CXCL12-204ENST00000395793 ZNF521Q96K83 1311 aa23.04■■□□□ 1.28
CXCL12-204ENST00000395793 ATP2B4P23634 1241 aa23.03■■□□□ 1.28
CXCL12-204ENST00000395793 CAPNS2Q96L46 248 aa23.03■■□□□ 1.28
CXCL12-204ENST00000395793 MED23Q9ULK4 1368 aa23.02■■□□□ 1.28
CXCL12-204ENST00000395793 RBM26Q5T8P6 1007 aaKnown RBP23.02■■□□□ 1.28
CXCL12-204ENST00000395793 CDC37L1Q7L3B6 337 aa23.02■■□□□ 1.28
CXCL12-204ENST00000395793 USP48Q86UV5 1035 aa23.02■■□□□ 1.28
CXCL12-204ENST00000395793 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
CXCL12-204ENST00000395793 G3V3G9 751 aa23.01■■□□□ 1.27
CXCL12-204ENST00000395793 CSF1RP07333 972 aa23.01■■□□□ 1.27
CXCL12-204ENST00000395793 ITGA6P23229 1130 aa23.01■■□□□ 1.27
CXCL12-204ENST00000395793 BEND3Q5T5X7 828 aa23.01■■□□□ 1.27
CXCL12-204ENST00000395793 DCAF8Q5TAQ9 597 aa23.01■■□□□ 1.27
CXCL12-204ENST00000395793 SAPCD2Q86UD0 394 aa23.01■■□□□ 1.27
CXCL12-204ENST00000395793 ASTN2O75129 1339 aaPredicted RBP23.01■■□□□ 1.27
CXCL12-204ENST00000395793 CCT4P50991 539 aaKnown RBP23■■□□□ 1.27
CXCL12-204ENST00000395793 KIF4BQ2VIQ3 1234 aa23■■□□□ 1.27
CXCL12-204ENST00000395793 RSBN1LQ6PCB5 846 aaPredicted RBP23■■□□□ 1.27
CXCL12-204ENST00000395793 PAXIP1Q6ZW49 1069 aaPredicted RBP23■■□□□ 1.27
CXCL12-204ENST00000395793 ZNF408Q9H9D4 720 aa23■■□□□ 1.27
CXCL12-204ENST00000395793 GRM1Q13255 1194 aa22.99■■□□□ 1.27
CXCL12-204ENST00000395793 TXNRD3Q86VQ6 643 aa22.99■■□□□ 1.27
CXCL12-204ENST00000395793 AIDAQ96BJ3 306 aa22.99■■□□□ 1.27
CXCL12-204ENST00000395793 GMLQ99445 158 aa22.99■■□□□ 1.27
CXCL12-204ENST00000395793 ADM5C9JUS6 153 aa22.98■■□□□ 1.27
CXCL12-204ENST00000395793 KLRK1P26718 216 aa22.98■■□□□ 1.27
CXCL12-204ENST00000395793 CTCFP49711 727 aaPredicted RBP22.98■■□□□ 1.27
CXCL12-204ENST00000395793 ZNF280AP59817 542 aaPredicted RBP22.98■■□□□ 1.27
CXCL12-204ENST00000395793 FOXO4P98177 505 aa22.98■■□□□ 1.27
CXCL12-204ENST00000395793 AOC2O75106 756 aa22.97■■□□□ 1.27
CXCL12-204ENST00000395793 IGHMBP2P38935 993 aaKnown RBP22.97■■□□□ 1.27
CXCL12-204ENST00000395793 KRT26Q7Z3Y9 468 aa22.97■■□□□ 1.27
CXCL12-204ENST00000395793 PODNQ7Z5L7 613 aa22.97■■□□□ 1.27
CXCL12-204ENST00000395793 AGBL3Q8NEM8 1001 aa22.97■■□□□ 1.27
CXCL12-204ENST00000395793 USP17L3A6NCW0 530 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 USP17L4A6NCW7 530 aa22.96■■□□□ 1.27
CXCL12-204ENST00000395793 HSPA8P11142 646 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms