RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 TNS4Q8IZW8 715 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 NEDD1Q8NHV4 660 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 KLRG1Q96E93 195 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 MAFBQ9Y5Q3 323 aaPredicted RBP8.77□□□□□ -1.01
AP3S1-202ENST00000395548 PARP3Q9Y6F1 533 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 UTRNP46939 3433 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 ASXL1Q8IXJ9 1541 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 TET3O43151 1660 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 ATXN7O15265 892 aaPredicted RBP8.76□□□□□ -1.01
AP3S1-202ENST00000395548 KCNQ2O43526 872 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 RASA1P20936 1047 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 BICDL1Q6ZP65 573 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 SIX5Q8N196 739 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 GDF2Q9UK05 429 aaPredicted RBP8.76□□□□□ -1.01
AP3S1-202ENST00000395548 ZNF232Q9UNY5 417 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 FMN1Q68DA7 1419 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 MAST1Q9Y2H9 1570 aa8.76□□□□□ -1.01
AP3S1-202ENST00000395548 GPATCH8Q9UKJ3 1502 aaKnown RBP8.75□□□□□ -1.01
AP3S1-202ENST00000395548 OIP5O43482 229 aa8.75□□□□□ -1.01
AP3S1-202ENST00000395548 RASSF7Q02833 373 aa8.75□□□□□ -1.01
AP3S1-202ENST00000395548 TMEM151AQ8N4L1 468 aa8.75□□□□□ -1.01
AP3S1-202ENST00000395548 ZIC5Q96T25 663 aa8.75□□□□□ -1.01
AP3S1-202ENST00000395548 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
AP3S1-202ENST00000395548 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 SERTM1A2A2V5 107 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 HSPA6P17066 643 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 KANK3Q6NY19 840 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 LARP1Q6PKG0 1096 aaKnown RBP8.74□□□□□ -1.01
AP3S1-202ENST00000395548 GOLGA6L1Q8N7Z2 621 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 ZDHHC1Q8WTX9 485 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
AP3S1-202ENST00000395548 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 NEUROD4Q9HD90 331 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 GPC6Q9Y625 555 aaPredicted RBP8.74□□□□□ -1.01
AP3S1-202ENST00000395548 CAMSAP2Q08AD1 1489 aa8.74□□□□□ -1.01
AP3S1-202ENST00000395548 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.74□□□□□ -1.01
AP3S1-202ENST00000395548 DCCP43146 1447 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 GDF11O95390 407 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 TXLNAP40222 546 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 GSK3AP49840 483 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 PSMA6P60900 246 aaKnown RBP8.73□□□□□ -1.01
AP3S1-202ENST00000395548 CTBSQ01459 385 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 TBCELQ5QJ74 424 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 PODNQ7Z5L7 613 aa8.73□□□□□ -1.01
AP3S1-202ENST00000395548 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
AP3S1-202ENST00000395548 CFDP1Q9UEE9 299 aaPredicted RBP8.73□□□□□ -1.01
AP3S1-202ENST00000395548 FAM83GA6ND36 823 aa8.72□□□□□ -1.01
AP3S1-202ENST00000395548 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
AP3S1-202ENST00000395548 MAPTP10636 758 aaKnown RBP8.72□□□□□ -1.01
AP3S1-202ENST00000395548 IRS1P35568 1242 aa8.72□□□□□ -1.01
AP3S1-202ENST00000395548 TNP2Q05952 138 aa8.72□□□□□ -1.01
AP3S1-202ENST00000395548 SAMD5Q5TGI4 173 aa8.72□□□□□ -1.01
AP3S1-202ENST00000395548 UNC5CLQ8IV45 518 aa8.72□□□□□ -1.01
AP3S1-202ENST00000395548 GALNT6Q8NCL4 622 aa8.72□□□□□ -1.01
AP3S1-202ENST00000395548 DISP2A7MBM2 1401 aa8.71□□□□□ -1.01
AP3S1-202ENST00000395548 DCDC2BA2VCK2 349 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 SFI1A8K8P3 1242 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 EML1O00423 815 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 C2CD2LO14523 706 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 KHNYNO15037 678 aaKnown RBP8.71□□□□□ -1.02
AP3S1-202ENST00000395548 FAM157BP0CG42 384 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 SEC13P55735 322 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 FAM182BQ5T319 152 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 TSPAN10Q9H1Z9 355 aaPredicted RBP8.71□□□□□ -1.02
AP3S1-202ENST00000395548 CHD4Q14839 1912 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 PARD3Q8TEW0 1356 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 CDC42BPAQ5VT25 1732 aa8.71□□□□□ -1.02
AP3S1-202ENST00000395548 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 DKK1O94907 266 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 ARAFP10398 606 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 EZH2Q15910 746 aaKnown RBP8.7□□□□□ -1.02
AP3S1-202ENST00000395548 COL13A1Q5TAT6 717 aaPredicted RBP8.7□□□□□ -1.02
AP3S1-202ENST00000395548 C1orf53Q5VUE5 145 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 TSEN2Q8NCE0 465 aaKnown RBP8.7□□□□□ -1.02
AP3S1-202ENST00000395548 EDARADDQ8WWZ3 215 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 VRTNQ9H8Y1 702 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 TBX22Q9Y458 520 aa8.7□□□□□ -1.02
AP3S1-202ENST00000395548 DNMT3AQ9Y6K1 912 aaPredicted RBP8.7□□□□□ -1.02
AP3S1-202ENST00000395548 LMOD1P29536 600 aaPredicted RBP8.69□□□□□ -1.02
AP3S1-202ENST00000395548 HIRAP54198 1017 aaPredicted RBP8.69□□□□□ -1.02
AP3S1-202ENST00000395548 KANK4Q5T7N3 995 aaPredicted RBP8.69□□□□□ -1.02
AP3S1-202ENST00000395548 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
AP3S1-202ENST00000395548 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
AP3S1-202ENST00000395548 GGA1Q9UJY5 639 aa8.69□□□□□ -1.02
AP3S1-202ENST00000395548 EFCAB6Q5THR3 1501 aa8.69□□□□□ -1.02
AP3S1-202ENST00000395548 PPP1R12BO60237 982 aaPredicted RBP8.68□□□□□ -1.02
AP3S1-202ENST00000395548 CD33P20138 364 aa8.68□□□□□ -1.02
AP3S1-202ENST00000395548 LRRC69Q6ZNQ3 347 aa8.68□□□□□ -1.02
AP3S1-202ENST00000395548 SLCO4C1Q6ZQN7 724 aa8.68□□□□□ -1.02
AP3S1-202ENST00000395548 RHPN1Q8TCX5 695 aa8.68□□□□□ -1.02
AP3S1-202ENST00000395548 DDX17Q92841 729 aaKnown RBP8.68□□□□□ -1.02
AP3S1-202ENST00000395548 AVENQ9NQS1 362 aaPredicted RBP8.68□□□□□ -1.02
AP3S1-202ENST00000395548 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
AP3S1-202ENST00000395548 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms