RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 SP8Q8IXZ3 490 aa17.5■□□□□ 0.39
SCAF11-203ENST00000395453 BCL2L13Q9BXK5 485 aa17.5■□□□□ 0.39
SCAF11-203ENST00000395453 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
SCAF11-203ENST00000395453 HAX1O00165 279 aa17.49■□□□□ 0.39
SCAF11-203ENST00000395453 TNIP1Q15025 636 aa17.49■□□□□ 0.39
SCAF11-203ENST00000395453 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-203ENST00000395453 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
SCAF11-203ENST00000395453 DDX46Q7L014 1031 aaKnown RBP17.48■□□□□ 0.39
SCAF11-203ENST00000395453 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
SCAF11-203ENST00000395453 FAM89AQ96GI7 184 aa17.48■□□□□ 0.39
SCAF11-203ENST00000395453 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
SCAF11-203ENST00000395453 DDX60Q8IY21 1712 aaKnown RBP17.48■□□□□ 0.39
SCAF11-203ENST00000395453 HIRAP54198 1017 aaPredicted RBP17.47■□□□□ 0.39
SCAF11-203ENST00000395453 HUNKP57058 714 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 GRAPQ13588 217 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 SF3B3Q15393 1217 aaKnown RBP17.47■□□□□ 0.39
SCAF11-203ENST00000395453 TSPYL6Q8N831 410 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
SCAF11-203ENST00000395453 CCDC30Q5VVM6 783 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 DPP8Q6V1X1 898 aaPredicted RBP17.47■□□□□ 0.39
SCAF11-203ENST00000395453 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 ZNF428Q96B54 188 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 ZIC5Q96T25 663 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
SCAF11-203ENST00000395453 TAF1P21675 1872 aa17.46■□□□□ 0.39
SCAF11-203ENST00000395453 H7C1D1 291 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 ANP32CO43423 234 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 RAD17O75943 681 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 GOLGA2Q08379 1002 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 TMC4Q7Z404 712 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 MPNDQ8N594 471 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 TRPM4Q8TD43 1214 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 MRS2Q9HD23 443 aa17.46■□□□□ 0.38
SCAF11-203ENST00000395453 CNOT7Q9UIV1 285 aaKnown RBP17.46■□□□□ 0.38
SCAF11-203ENST00000395453 IL16Q14005 1332 aa17.45■□□□□ 0.38
SCAF11-203ENST00000395453 USP48Q86UV5 1035 aa17.45■□□□□ 0.38
SCAF11-203ENST00000395453 ZBTB38Q8NAP3 1195 aaPredicted RBP17.45■□□□□ 0.38
SCAF11-203ENST00000395453 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
SCAF11-203ENST00000395453 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
SCAF11-203ENST00000395453 SOX10P56693 466 aa17.44■□□□□ 0.38
SCAF11-203ENST00000395453 RGMBQ6NW40 437 aa17.44■□□□□ 0.38
SCAF11-203ENST00000395453 CCDC191Q8NCU4 936 aa17.44■□□□□ 0.38
SCAF11-203ENST00000395453 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
SCAF11-203ENST00000395453 MYD88Q99836 296 aa17.43■□□□□ 0.38
SCAF11-203ENST00000395453 METTL22Q9BUU2 404 aaPredicted RBP17.43■□□□□ 0.38
SCAF11-203ENST00000395453 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
SCAF11-203ENST00000395453 FAM155AB1AL88 458 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-203ENST00000395453 DDX58O95786 925 aaKnown RBP17.42■□□□□ 0.38
SCAF11-203ENST00000395453 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-203ENST00000395453 PRPF38BQ5VTL8 546 aaKnown RBP17.42■□□□□ 0.38
SCAF11-203ENST00000395453 MICALL2Q8IY33 904 aa17.42■□□□□ 0.38
SCAF11-203ENST00000395453 C2orf69Q8N8R5 385 aa17.42■□□□□ 0.38
SCAF11-203ENST00000395453 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
SCAF11-203ENST00000395453 GBA2Q9HCG7 927 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-203ENST00000395453 SHTN1A0MZ66 631 aa17.41■□□□□ 0.38
SCAF11-203ENST00000395453 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
SCAF11-203ENST00000395453 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
SCAF11-203ENST00000395453 KIF23Q02241 960 aaPredicted RBP17.41■□□□□ 0.38
SCAF11-203ENST00000395453 KRT26Q7Z3Y9 468 aa17.41■□□□□ 0.38
SCAF11-203ENST00000395453 DPF2Q92785 391 aa17.41■□□□□ 0.38
SCAF11-203ENST00000395453 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
SCAF11-203ENST00000395453 YDJCA8MPS7 323 aa17.4■□□□□ 0.38
SCAF11-203ENST00000395453 TRPA1O75762 1119 aa17.4■□□□□ 0.38
SCAF11-203ENST00000395453 ZNF157P51786 506 aaPredicted RBP17.4■□□□□ 0.38
SCAF11-203ENST00000395453 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
SCAF11-203ENST00000395453 KSR2Q6VAB6 950 aa17.4■□□□□ 0.38
SCAF11-203ENST00000395453 CWC25Q9NXE8 425 aaPredicted RBP17.4■□□□□ 0.38
SCAF11-203ENST00000395453 RNF186Q9NXI6 227 aa17.4■□□□□ 0.38
SCAF11-203ENST00000395453 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
SCAF11-203ENST00000395453 COL4A1P02462 1669 aa17.4■□□□□ 0.38
SCAF11-203ENST00000395453 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
SCAF11-203ENST00000395453 DLK2Q6UY11 383 aa17.39■□□□□ 0.37
SCAF11-203ENST00000395453 SAMD7Q7Z3H4 446 aa17.39■□□□□ 0.37
SCAF11-203ENST00000395453 WDR63Q8IWG1 891 aa17.39■□□□□ 0.37
SCAF11-203ENST00000395453 DCPSQ96C86 337 aaKnown RBP17.39■□□□□ 0.37
SCAF11-203ENST00000395453 PI4KAP2A4QPH2 592 aa17.38■□□□□ 0.37
SCAF11-203ENST00000395453 IGKV5-2P06315 115 aa17.38■□□□□ 0.37
SCAF11-203ENST00000395453 CTU1Q7Z7A3 348 aaKnown RBP17.38■□□□□ 0.37
SCAF11-203ENST00000395453 PI4KAP1Q8N8J0 262 aa17.38■□□□□ 0.37
SCAF11-203ENST00000395453 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
SCAF11-203ENST00000395453 PDE8AO60658 829 aa17.37■□□□□ 0.37
SCAF11-203ENST00000395453 TBC1D10BQ4KMP7 808 aaPredicted RBP17.37■□□□□ 0.37
SCAF11-203ENST00000395453 G2E3Q7L622 706 aa17.37■□□□□ 0.37
SCAF11-203ENST00000395453 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
SCAF11-203ENST00000395453 POLLQ9UGP5 575 aa17.37■□□□□ 0.37
SCAF11-203ENST00000395453 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
SCAF11-203ENST00000395453 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
SCAF11-203ENST00000395453 PSMD14O00487 310 aa17.36■□□□□ 0.37
SCAF11-203ENST00000395453 SLC10A3P09131 477 aa17.36■□□□□ 0.37
SCAF11-203ENST00000395453 RPS12P25398 132 aaKnown RBP17.36■□□□□ 0.37
SCAF11-203ENST00000395453 GPSM2P81274 684 aa17.36■□□□□ 0.37
SCAF11-203ENST00000395453 SPDYE1Q8NFV5 336 aaPredicted RBP17.36■□□□□ 0.37
SCAF11-203ENST00000395453 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
SCAF11-203ENST00000395453 AKAP11Q9UKA4 1901 aa17.35■□□□□ 0.37
SCAF11-203ENST00000395453 CACNA1FO60840 1977 aa17.35■□□□□ 0.37
SCAF11-203ENST00000395453 VAMP4O75379 141 aa17.35■□□□□ 0.37
SCAF11-203ENST00000395453 WASHC4Q2M389 1173 aa17.35■□□□□ 0.37
SCAF11-203ENST00000395453 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
SCAF11-203ENST00000395453 CSRNP1Q96S65 589 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms