RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
HIF1A-203ENST00000394997 LRRC37AA6NMS7 1700 aa12.35□□□□□ -0.43
HIF1A-203ENST00000394997 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
HIF1A-203ENST00000394997 UBR3Q6ZT12 1888 aa12.35□□□□□ -0.43
HIF1A-203ENST00000394997 DTNBO60941 627 aa12.35□□□□□ -0.43
HIF1A-203ENST00000394997 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
HIF1A-203ENST00000394997 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
HIF1A-203ENST00000394997 SYT1P21579 422 aa12.34□□□□□ -0.43
HIF1A-203ENST00000394997 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
HIF1A-203ENST00000394997 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
HIF1A-203ENST00000394997 PUS3Q9BZE2 481 aaKnown RBP12.34□□□□□ -0.43
HIF1A-203ENST00000394997 ABCC12Q96J65 1359 aa12.34□□□□□ -0.43
HIF1A-203ENST00000394997 NEDD4P46934 1319 aa12.34□□□□□ -0.43
HIF1A-203ENST00000394997 CDHR2Q9BYE9 1310 aa12.34□□□□□ -0.43
HIF1A-203ENST00000394997 CTDNEP1O95476 244 aa12.34□□□□□ -0.43
HIF1A-203ENST00000394997 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
HIF1A-203ENST00000394997 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
HIF1A-203ENST00000394997 CYP19A1P11511 503 aaPredicted RBP12.34□□□□□ -0.43
HIF1A-203ENST00000394997 CABP4P57796 275 aa12.34□□□□□ -0.43
HIF1A-203ENST00000394997 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
HIF1A-203ENST00000394997 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
HIF1A-203ENST00000394997 TPM2P07951 284 aa12.33□□□□□ -0.43
HIF1A-203ENST00000394997 EVCP57679 992 aa12.33□□□□□ -0.43
HIF1A-203ENST00000394997 CCDC191Q8NCU4 936 aa12.33□□□□□ -0.43
HIF1A-203ENST00000394997 CYP21A2P08686 494 aa12.33□□□□□ -0.44
HIF1A-203ENST00000394997 HLFQ16534 295 aa12.33□□□□□ -0.44
HIF1A-203ENST00000394997 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
HIF1A-203ENST00000394997 CDK11BP21127 795 aaKnown RBP12.33□□□□□ -0.44
HIF1A-203ENST00000394997 SIL1Q9H173 461 aa12.33□□□□□ -0.44
HIF1A-203ENST00000394997 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
HIF1A-203ENST00000394997 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 SCARF1Q14162 830 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
HIF1A-203ENST00000394997 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 LMBR1LQ6UX01 489 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
HIF1A-203ENST00000394997 BOLA2Q9H3K6 86 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 RIPOR2Q9Y4F9 1068 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 A0A087WZG4 1122 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 NOL8Q76FK4 1167 aaKnown RBP12.32□□□□□ -0.44
HIF1A-203ENST00000394997 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
HIF1A-203ENST00000394997 RNF214Q8ND24 703 aa12.32□□□□□ -0.44
HIF1A-203ENST00000394997 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
HIF1A-203ENST00000394997 CASTP20810 708 aaKnown RBP12.31□□□□□ -0.44
HIF1A-203ENST00000394997 ZMYM1Q5SVZ6 1142 aa12.31□□□□□ -0.44
HIF1A-203ENST00000394997 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
HIF1A-203ENST00000394997 AP5Z1O43299 807 aa12.31□□□□□ -0.44
HIF1A-203ENST00000394997 PTMSP20962 102 aa12.31□□□□□ -0.44
HIF1A-203ENST00000394997 TCIRG1Q13488 830 aa12.31□□□□□ -0.44
HIF1A-203ENST00000394997 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
HIF1A-203ENST00000394997 ZNF594Q96JF6 807 aaPredicted RBP12.31□□□□□ -0.44
HIF1A-203ENST00000394997 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
HIF1A-203ENST00000394997 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
HIF1A-203ENST00000394997 INTS5Q6P9B9 1019 aaKnown RBP12.31□□□□□ -0.44
HIF1A-203ENST00000394997 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
HIF1A-203ENST00000394997 LRSAM1Q6UWE0 723 aa12.3□□□□□ -0.44
HIF1A-203ENST00000394997 RBM43Q6ZSC3 357 aaKnown RBP12.3□□□□□ -0.44
HIF1A-203ENST00000394997 KBTBD3Q8NAB2 608 aa12.3□□□□□ -0.44
HIF1A-203ENST00000394997 M0R2C6 588 aa12.3□□□□□ -0.44
HIF1A-203ENST00000394997 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
HIF1A-203ENST00000394997 MAST3O60307 1309 aa12.3□□□□□ -0.44
HIF1A-203ENST00000394997 F13A1P00488 732 aa12.3□□□□□ -0.44
HIF1A-203ENST00000394997 FGFR2P21802 821 aa12.3□□□□□ -0.44
HIF1A-203ENST00000394997 ZNF512BQ96KM6 892 aaPredicted RBP12.3□□□□□ -0.44
HIF1A-203ENST00000394997 TCRBV5S4A2TA0A5A2 114 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 PCCAP05165 728 aaPredicted RBP12.29□□□□□ -0.44
HIF1A-203ENST00000394997 ZNF34Q8IZ26 560 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 MYH6P13533 1939 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
HIF1A-203ENST00000394997 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 NRXN2Q9P2S2 1712 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
HIF1A-203ENST00000394997 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
HIF1A-203ENST00000394997 BAZ2AQ9UIF9 1905 aaKnown RBP12.29□□□□□ -0.44
HIF1A-203ENST00000394997 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 PDCL3Q9H2J4 239 aa12.29□□□□□ -0.44
HIF1A-203ENST00000394997 EYA2O00167 538 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 IFIT2P09913 472 aaKnown RBP12.28□□□□□ -0.44
HIF1A-203ENST00000394997 ADORA1P30542 326 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 SPATA31A1Q5TZJ5 1347 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 NLRP10Q86W26 655 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 IRS2Q9Y4H2 1338 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 TOM1L2Q6ZVM7 507 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 JAKMIP1Q96N16 626 aaKnown RBP12.28□□□□□ -0.44
HIF1A-203ENST00000394997 DUOX1Q9NRD9 1551 aa12.28□□□□□ -0.44
HIF1A-203ENST00000394997 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 UQCRHLA0A096LP55 91 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 STX6O43752 255 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 UQCRHP07919 91 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.44
HIF1A-203ENST00000394997 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 KLHL34Q8N239 644 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 ZBTB38Q8NAP3 1195 aaPredicted RBP12.27□□□□□ -0.44
HIF1A-203ENST00000394997 FBXO3Q9UK99 471 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms