RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 TRPA1O75762 1119 aa20.72■□□□□ 0.91
SNCA-205ENST00000394991 SLC10A3P09131 477 aa20.72■□□□□ 0.91
SNCA-205ENST00000394991 KIF4BQ2VIQ3 1234 aa20.72■□□□□ 0.91
SNCA-205ENST00000394991 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
SNCA-205ENST00000394991 GGA3Q9NZ52 723 aa20.72■□□□□ 0.91
SNCA-205ENST00000394991 PCDH10Q9P2E7 1040 aa20.72■□□□□ 0.91
SNCA-205ENST00000394991 ATP5J2-PTCD1G3V325 749 aa20.71■□□□□ 0.91
SNCA-205ENST00000394991 TBC1D16Q8TBP0 767 aa20.71■□□□□ 0.91
SNCA-205ENST00000394991 PAPPA2Q9BXP8 1791 aa20.7■□□□□ 0.9
SNCA-205ENST00000394991 LMOD3Q0VAK6 560 aa20.7■□□□□ 0.9
SNCA-205ENST00000394991 CDCA5Q96FF9 252 aa20.7■□□□□ 0.9
SNCA-205ENST00000394991 CSRNP1Q96S65 589 aa20.7■□□□□ 0.9
SNCA-205ENST00000394991 EYA3Q99504 573 aa20.7■□□□□ 0.9
SNCA-205ENST00000394991 CHL1O00533 1208 aa20.69■□□□□ 0.9
SNCA-205ENST00000394991 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
SNCA-205ENST00000394991 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
SNCA-205ENST00000394991 ZNF646O15015 1829 aaPredicted RBP20.69■□□□□ 0.9
SNCA-205ENST00000394991 ZNF609O15014 1411 aa20.69■□□□□ 0.9
SNCA-205ENST00000394991 HDGFL1Q5TGJ6 251 aa20.68■□□□□ 0.9
SNCA-205ENST00000394991 ANKRD13DQ6ZTN6 518 aa20.68■□□□□ 0.9
SNCA-205ENST00000394991 SULF1Q8IWU6 871 aa20.68■□□□□ 0.9
SNCA-205ENST00000394991 IRS4O14654 1257 aaPredicted RBP20.67■□□□□ 0.9
SNCA-205ENST00000394991 RPS8P62241 208 aaKnown RBP20.67■□□□□ 0.9
SNCA-205ENST00000394991 RASAL3Q86YV0 1011 aa20.67■□□□□ 0.9
SNCA-205ENST00000394991 CTU1Q7Z7A3 348 aaKnown RBP20.66■□□□□ 0.9
SNCA-205ENST00000394991 PODXL2Q9NZ53 605 aa20.66■□□□□ 0.9
SNCA-205ENST00000394991 SPEF2Q9C093 1822 aa20.65■□□□□ 0.9
SNCA-205ENST00000394991 ZNF280AP59817 542 aaPredicted RBP20.65■□□□□ 0.9
SNCA-205ENST00000394991 NEUROD2Q15784 382 aa20.65■□□□□ 0.9
SNCA-205ENST00000394991 ZC3H12CQ9C0D7 883 aaKnown RBP20.65■□□□□ 0.9
SNCA-205ENST00000394991 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
SNCA-205ENST00000394991 TRIM35Q9UPQ4 493 aa20.65■□□□□ 0.9
SNCA-205ENST00000394991 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
SNCA-205ENST00000394991 UFL1O94874 794 aa20.64■□□□□ 0.89
SNCA-205ENST00000394991 HOXB7P09629 217 aa20.64■□□□□ 0.89
SNCA-205ENST00000394991 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.89
SNCA-205ENST00000394991 ANGEL2Q5VTE6 544 aaKnown RBP20.64■□□□□ 0.89
SNCA-205ENST00000394991 CCDC146Q8IYE0 955 aa20.64■□□□□ 0.89
SNCA-205ENST00000394991 DBF4Q9UBU7 674 aaPredicted RBP20.64■□□□□ 0.89
SNCA-205ENST00000394991 SCARF1Q14162 830 aa20.63■□□□□ 0.89
SNCA-205ENST00000394991 RSBN1LQ6PCB5 846 aaPredicted RBP20.63■□□□□ 0.89
SNCA-205ENST00000394991 MOB2Q70IA6 237 aa20.62■□□□□ 0.89
SNCA-205ENST00000394991 GMLQ99445 158 aa20.62■□□□□ 0.89
SNCA-205ENST00000394991 AGBL3Q8NEM8 1001 aa20.61■□□□□ 0.89
SNCA-205ENST00000394991 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
SNCA-205ENST00000394991 GGA1Q9UJY5 639 aa20.61■□□□□ 0.89
SNCA-205ENST00000394991 SCAF8Q9UPN6 1271 aaKnown RBP20.61■□□□□ 0.89
SNCA-205ENST00000394991 HPS5Q9UPZ3 1129 aa20.61■□□□□ 0.89
SNCA-205ENST00000394991 MYH3P11055 1940 aa20.61■□□□□ 0.89
SNCA-205ENST00000394991 G3V3G9 751 aa20.6■□□□□ 0.89
SNCA-205ENST00000394991 DCAF8Q5TAQ9 597 aa20.6■□□□□ 0.89
SNCA-205ENST00000394991 REM2Q8IYK8 340 aaPredicted RBP20.6■□□□□ 0.89
SNCA-205ENST00000394991 ZBTB38Q8NAP3 1195 aaPredicted RBP20.6■□□□□ 0.89
SNCA-205ENST00000394991 ANKIB1Q9P2G1 1089 aa20.6■□□□□ 0.89
SNCA-205ENST00000394991 PITPNM2Q9BZ72 1349 aa20.59■□□□□ 0.89
SNCA-205ENST00000394991 FKBP1BP68106 108 aa20.59■□□□□ 0.89
SNCA-205ENST00000394991 PRPF38BQ5VTL8 546 aaKnown RBP20.59■□□□□ 0.89
SNCA-205ENST00000394991 DUSP27Q5VZP5 1158 aa20.59■□□□□ 0.89
SNCA-205ENST00000394991 MYOZ2Q9NPC6 264 aa20.59■□□□□ 0.89
SNCA-205ENST00000394991 UBE2Q2LH0YL09 131 aa20.57■□□□□ 0.88
SNCA-205ENST00000394991 USP17L8P0C7I0 530 aa20.57■□□□□ 0.88
SNCA-205ENST00000394991 RIC3Q7Z5B4 369 aa20.57■□□□□ 0.88
SNCA-205ENST00000394991 ZNF296Q8WUU4 475 aaPredicted RBP20.57■□□□□ 0.88
SNCA-205ENST00000394991 JARID2Q92833 1246 aaPredicted RBP20.57■□□□□ 0.88
SNCA-205ENST00000394991 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
SNCA-205ENST00000394991 PHAXQ9H814 394 aaKnown RBP20.57■□□□□ 0.88
SNCA-205ENST00000394991 TBC1D8O95759 1140 aa20.56■□□□□ 0.88
SNCA-205ENST00000394991 RALBP1Q15311 655 aa20.56■□□□□ 0.88
SNCA-205ENST00000394991 PRAMEF18Q5VWM3 479 aa20.56■□□□□ 0.88
SNCA-205ENST00000394991 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
SNCA-205ENST00000394991 MYD88Q99836 296 aa20.56■□□□□ 0.88
SNCA-205ENST00000394991 XDHP47989 1333 aa20.55■□□□□ 0.88
SNCA-205ENST00000394991 WTIPA6NIX2 430 aaPredicted RBP20.55■□□□□ 0.88
SNCA-205ENST00000394991 PCCAP05165 728 aaPredicted RBP20.55■□□□□ 0.88
SNCA-205ENST00000394991 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
SNCA-205ENST00000394991 CCDC152Q4G0S7 254 aa20.55■□□□□ 0.88
SNCA-205ENST00000394991 MBIPQ9NS73 344 aa20.55■□□□□ 0.88
SNCA-205ENST00000394991 USP17L3A6NCW0 530 aa20.54■□□□□ 0.88
SNCA-205ENST00000394991 USP17L4A6NCW7 530 aa20.54■□□□□ 0.88
SNCA-205ENST00000394991 PDE8AO60658 829 aa20.54■□□□□ 0.88
SNCA-205ENST00000394991 NBPF9Q3BBW0 867 aa20.54■□□□□ 0.88
SNCA-205ENST00000394991 USP17L1Q7RTZ2 530 aa20.54■□□□□ 0.88
SNCA-205ENST00000394991 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
SNCA-205ENST00000394991 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
SNCA-205ENST00000394991 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
SNCA-205ENST00000394991 MXD3Q9BW11 206 aa20.53■□□□□ 0.88
SNCA-205ENST00000394991 HDAC9Q9UKV0 1011 aa20.53■□□□□ 0.88
SNCA-205ENST00000394991 MED23Q9ULK4 1368 aa20.52■□□□□ 0.88
SNCA-205ENST00000394991 HSP90B1P14625 803 aaKnown RBP20.52■□□□□ 0.88
SNCA-205ENST00000394991 PODNQ7Z5L7 613 aa20.52■□□□□ 0.88
SNCA-205ENST00000394991 ANKRD18AQ8IVF6 992 aa20.52■□□□□ 0.88
SNCA-205ENST00000394991 LAMB1P07942 1786 aa20.51■□□□□ 0.87
SNCA-205ENST00000394991 GPR25O00155 361 aa20.51■□□□□ 0.87
SNCA-205ENST00000394991 ZNF853P0CG23 659 aa20.51■□□□□ 0.87
SNCA-205ENST00000394991 TM4SF4P48230 202 aa20.51■□□□□ 0.87
SNCA-205ENST00000394991 CWC25Q9NXE8 425 aaPredicted RBP20.51■□□□□ 0.87
SNCA-205ENST00000394991 MYBBP1AQ9BQG0 1328 aaKnown RBP20.51■□□□□ 0.87
SNCA-205ENST00000394991 MKRN3Q13064 507 aaKnown RBP20.5■□□□□ 0.87
SNCA-205ENST00000394991 DACT2Q5SW24 774 aa20.5■□□□□ 0.87
SNCA-205ENST00000394991 ECM29Q5VYK3 1845 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms