RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TRIM28Q13263 835 aaKnown RBP27.44■■□□□ 1.98
TRAF4-203ENST00000394925 TBC1D16Q8TBP0 767 aa27.44■■□□□ 1.98
TRAF4-203ENST00000394925 MCOLN1Q9GZU1 580 aa27.44■■□□□ 1.98
TRAF4-203ENST00000394925 RTL9Q8NET4 1388 aa27.44■■□□□ 1.98
TRAF4-203ENST00000394925 RIC3Q7Z5B4 369 aa27.43■■□□□ 1.98
TRAF4-203ENST00000394925 ADM5C9JUS6 153 aa27.42■■□□□ 1.98
TRAF4-203ENST00000394925 DCPSQ96C86 337 aaKnown RBP27.42■■□□□ 1.98
TRAF4-203ENST00000394925 ZC3H12CQ9C0D7 883 aaKnown RBP27.42■■□□□ 1.98
TRAF4-203ENST00000394925 MBIPQ9NS73 344 aa27.42■■□□□ 1.98
TRAF4-203ENST00000394925 MLLT1Q03111 559 aaPredicted RBP27.41■■□□□ 1.98
TRAF4-203ENST00000394925 GBA2Q9HCG7 927 aaPredicted RBP27.41■■□□□ 1.98
TRAF4-203ENST00000394925 SEC31BQ9NQW1 1179 aa27.41■■□□□ 1.98
TRAF4-203ENST00000394925 GOLGA2Q08379 1002 aa27.4■■□□□ 1.98
TRAF4-203ENST00000394925 RGMBQ6NW40 437 aa27.4■■□□□ 1.98
TRAF4-203ENST00000394925 C2orf69Q8N8R5 385 aa27.4■■□□□ 1.98
TRAF4-203ENST00000394925 ZBTB38Q8NAP3 1195 aaPredicted RBP27.4■■□□□ 1.98
TRAF4-203ENST00000394925 SCN9AQ15858 1988 aa27.4■■□□□ 1.98
TRAF4-203ENST00000394925 G3V3G9 751 aa27.39■■□□□ 1.98
TRAF4-203ENST00000394925 DGKZQ13574 1117 aa27.39■■□□□ 1.98
TRAF4-203ENST00000394925 KIF4BQ2VIQ3 1234 aa27.39■■□□□ 1.98
TRAF4-203ENST00000394925 DCAF8Q5TAQ9 597 aa27.39■■□□□ 1.98
TRAF4-203ENST00000394925 PHAXQ9H814 394 aaKnown RBP27.39■■□□□ 1.98
TRAF4-203ENST00000394925 UFL1O94874 794 aa27.38■■□□□ 1.97
TRAF4-203ENST00000394925 VIL1P09327 827 aaKnown RBP27.38■■□□□ 1.97
TRAF4-203ENST00000394925 RGS19P49795 217 aa27.38■■□□□ 1.97
TRAF4-203ENST00000394925 PODXL2Q9NZ53 605 aa27.38■■□□□ 1.97
TRAF4-203ENST00000394925 ANKIB1Q9P2G1 1089 aa27.38■■□□□ 1.97
TRAF4-203ENST00000394925 FAM155AB1AL88 458 aaPredicted RBP27.37■■□□□ 1.97
TRAF4-203ENST00000394925 MYD88Q99836 296 aa27.37■■□□□ 1.97
TRAF4-203ENST00000394925 ELL2O00472 640 aaPredicted RBP27.36■■□□□ 1.97
TRAF4-203ENST00000394925 HSP90B1P14625 803 aaKnown RBP27.36■■□□□ 1.97
TRAF4-203ENST00000394925 GGA3Q9NZ52 723 aa27.36■■□□□ 1.97
TRAF4-203ENST00000394925 GGA1Q9UJY5 639 aa27.36■■□□□ 1.97
TRAF4-203ENST00000394925 ZNF853P0CG23 659 aa27.35■■□□□ 1.97
TRAF4-203ENST00000394925 ZNF157P51786 506 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-203ENST00000394925 SULF1Q8IWU6 871 aa27.35■■□□□ 1.97
TRAF4-203ENST00000394925 JARID2Q92833 1246 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-203ENST00000394925 CCDC102AQ96A19 550 aa27.35■■□□□ 1.97
TRAF4-203ENST00000394925 CCDC85AQ96PX6 553 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-203ENST00000394925 ASTN2O75129 1339 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-203ENST00000394925 KIF23Q02241 960 aaPredicted RBP27.34■■□□□ 1.97
TRAF4-203ENST00000394925 CCDC152Q4G0S7 254 aa27.34■■□□□ 1.97
TRAF4-203ENST00000394925 CCDC191Q8NCU4 936 aa27.33■■□□□ 1.97
TRAF4-203ENST00000394925 PDE8AO60658 829 aa27.32■■□□□ 1.96
TRAF4-203ENST00000394925 PCCAP05165 728 aaPredicted RBP27.32■■□□□ 1.96
TRAF4-203ENST00000394925 IFT57Q9NWB7 429 aa27.32■■□□□ 1.96
TRAF4-203ENST00000394925 RSBN1LQ6PCB5 846 aaPredicted RBP27.31■■□□□ 1.96
TRAF4-203ENST00000394925 CDCA5Q96FF9 252 aa27.31■■□□□ 1.96
TRAF4-203ENST00000394925 CWC25Q9NXE8 425 aaPredicted RBP27.31■■□□□ 1.96
TRAF4-203ENST00000394925 APAF1O14727 1248 aa27.3■■□□□ 1.96
TRAF4-203ENST00000394925 GNAI1P63096 354 aa27.3■■□□□ 1.96
TRAF4-203ENST00000394925 ZNF280AP59817 542 aaPredicted RBP27.29■■□□□ 1.96
TRAF4-203ENST00000394925 SCARF1Q14162 830 aa27.29■■□□□ 1.96
TRAF4-203ENST00000394925 ANGEL2Q5VTE6 544 aaKnown RBP27.29■■□□□ 1.96
TRAF4-203ENST00000394925 ANKRD18AQ8IVF6 992 aa27.29■■□□□ 1.96
TRAF4-203ENST00000394925 AGBL3Q8NEM8 1001 aa27.29■■□□□ 1.96
TRAF4-203ENST00000394925 SAGE1Q9NXZ1 904 aa27.29■■□□□ 1.96
TRAF4-203ENST00000394925 AKAP11Q9UKA4 1901 aa27.28■■□□□ 1.96
TRAF4-203ENST00000394925 XDHP47989 1333 aa27.28■■□□□ 1.96
TRAF4-203ENST00000394925 TRPA1O75762 1119 aa27.28■■□□□ 1.96
TRAF4-203ENST00000394925 SLC10A3P09131 477 aa27.28■■□□□ 1.96
TRAF4-203ENST00000394925 C8orf58Q8NAV2 365 aa27.28■■□□□ 1.96
TRAF4-203ENST00000394925 METTL22Q9BUU2 404 aaPredicted RBP27.28■■□□□ 1.96
TRAF4-203ENST00000394925 RNF186Q9NXI6 227 aa27.28■■□□□ 1.96
TRAF4-203ENST00000394925 CALD1Q05682 793 aaKnown RBP27.27■■□□□ 1.96
TRAF4-203ENST00000394925 PSME4Q14997 1843 aa27.27■■□□□ 1.96
TRAF4-203ENST00000394925 DDX58O95786 925 aaKnown RBP27.26■■□□□ 1.95
TRAF4-203ENST00000394925 ZNF609O15014 1411 aa27.25■■□□□ 1.95
TRAF4-203ENST00000394925 SLC34A2O95436 690 aa27.25■■□□□ 1.95
TRAF4-203ENST00000394925 ATP2B4P23634 1241 aa27.25■■□□□ 1.95
TRAF4-203ENST00000394925 CSRNP1Q96S65 589 aa27.25■■□□□ 1.95
TRAF4-203ENST00000394925 GMLQ99445 158 aa27.25■■□□□ 1.95
TRAF4-203ENST00000394925 MYOZ2Q9NPC6 264 aa27.25■■□□□ 1.95
TRAF4-203ENST00000394925 USP17L8P0C7I0 530 aa27.24■■□□□ 1.95
TRAF4-203ENST00000394925 CCDC30Q5VVM6 783 aa27.24■■□□□ 1.95
TRAF4-203ENST00000394925 MAP3K2Q9Y2U5 619 aa27.24■■□□□ 1.95
TRAF4-203ENST00000394925 USP17L3A6NCW0 530 aa27.23■■□□□ 1.95
TRAF4-203ENST00000394925 USP17L4A6NCW7 530 aa27.23■■□□□ 1.95
TRAF4-203ENST00000394925 USP17L1Q7RTZ2 530 aa27.23■■□□□ 1.95
TRAF4-203ENST00000394925 PODNQ7Z5L7 613 aa27.23■■□□□ 1.95
TRAF4-203ENST00000394925 PRKRIP1Q9H875 184 aaPredicted RBP27.23■■□□□ 1.95
TRAF4-203ENST00000394925 WTIPA6NIX2 430 aaPredicted RBP27.22■■□□□ 1.95
TRAF4-203ENST00000394925 RASAL3Q86YV0 1011 aa27.22■■□□□ 1.95
TRAF4-203ENST00000394925 CDC5LQ99459 802 aaKnown RBP27.22■■□□□ 1.95
TRAF4-203ENST00000394925 SCAF8Q9UPN6 1271 aaKnown RBP27.22■■□□□ 1.95
TRAF4-203ENST00000394925 TNRC18O15417 2968 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-203ENST00000394925 CTSWP56202 376 aa27.21■■□□□ 1.95
TRAF4-203ENST00000394925 TSPYL6Q8N831 410 aa27.2■■□□□ 1.94
TRAF4-203ENST00000394925 CHMP4AQ9BY43 222 aa27.2■■□□□ 1.94
TRAF4-203ENST00000394925 PITPNM2Q9BZ72 1349 aa27.19■■□□□ 1.94
TRAF4-203ENST00000394925 SPEF2Q9C093 1822 aa27.19■■□□□ 1.94
TRAF4-203ENST00000394925 IGKV5-2P06315 115 aa27.19■■□□□ 1.94
TRAF4-203ENST00000394925 FKBP1BP68106 108 aa27.19■■□□□ 1.94
TRAF4-203ENST00000394925 KSR2Q6VAB6 950 aa27.19■■□□□ 1.94
TRAF4-203ENST00000394925 TTLL11Q8NHH1 800 aa27.19■■□□□ 1.94
TRAF4-203ENST00000394925 MINPP1Q9UNW1 487 aa27.19■■□□□ 1.94
TRAF4-203ENST00000394925 PAPPA2Q9BXP8 1791 aa27.18■■□□□ 1.94
TRAF4-203ENST00000394925 PI4KAP2A4QPH2 592 aa27.18■■□□□ 1.94
TRAF4-203ENST00000394925 MOB2Q70IA6 237 aa27.18■■□□□ 1.94
TRAF4-203ENST00000394925 REM2Q8IYK8 340 aaPredicted RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms