RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 MAGEB6Q8N7X4 407 aa22.86■■□□□ 1.25
CXXC4-201ENST00000394767 LPIN2Q92539 896 aa22.86■■□□□ 1.25
CXXC4-201ENST00000394767 CCDC43Q96MW1 224 aaKnown RBP22.86■■□□□ 1.25
CXXC4-201ENST00000394767 CLEC11AQ9Y240 323 aa22.86■■□□□ 1.25
CXXC4-201ENST00000394767 MPNDQ8N594 471 aa22.86■■□□□ 1.25
CXXC4-201ENST00000394767 MIGA1Q8NAN2 632 aa22.86■■□□□ 1.25
CXXC4-201ENST00000394767 ZSCAN31Q96LW9 406 aaPredicted RBP22.86■■□□□ 1.25
CXXC4-201ENST00000394767 ATF5Q9Y2D1 282 aaPredicted RBP22.86■■□□□ 1.25
CXXC4-201ENST00000394767 PDE4BQ07343 736 aa22.85■■□□□ 1.25
CXXC4-201ENST00000394767 TXNRD1Q16881 649 aa22.85■■□□□ 1.25
CXXC4-201ENST00000394767 ERVV-1B6SEH8 477 aa22.85■■□□□ 1.25
CXXC4-201ENST00000394767 IFIT3O14879 490 aaKnown RBP22.85■■□□□ 1.25
CXXC4-201ENST00000394767 CDKL5O76039 1030 aa22.85■■□□□ 1.25
CXXC4-201ENST00000394767 MCMDC2Q4G0Z9 681 aa22.85■■□□□ 1.25
CXXC4-201ENST00000394767 VEZTQ9HBM0 779 aa22.85■■□□□ 1.25
CXXC4-201ENST00000394767 EN1Q05925 392 aaPredicted RBP22.85■■□□□ 1.25
CXXC4-201ENST00000394767 PLEKHM2Q8IWE5 1019 aa22.84■■□□□ 1.25
CXXC4-201ENST00000394767 MROH5Q6ZUA9 1318 aa22.84■■□□□ 1.25
CXXC4-201ENST00000394767 TSPY2A6NKD2 308 aa22.84■■□□□ 1.25
CXXC4-201ENST00000394767 PAXIP1Q6ZW49 1069 aaPredicted RBP22.84■■□□□ 1.25
CXXC4-201ENST00000394767 TPM4P67936 248 aa22.84■■□□□ 1.25
CXXC4-201ENST00000394767 HMGB1P09429 215 aaKnown RBP22.84■■□□□ 1.25
CXXC4-201ENST00000394767 MFSD6Q6ZSS7 791 aa22.84■■□□□ 1.25
CXXC4-201ENST00000394767 MAGEB6P1A0A0J9YX57 407 aa22.83■■□□□ 1.25
CXXC4-201ENST00000394767 NLRP10Q86W26 655 aa22.83■■□□□ 1.25
CXXC4-201ENST00000394767 CPDO75976 1380 aa22.83■■□□□ 1.25
CXXC4-201ENST00000394767 GREM2Q9H772 168 aa22.83■■□□□ 1.25
CXXC4-201ENST00000394767 OTUD7AQ8TE49 926 aaPredicted RBP22.82■■□□□ 1.24
CXXC4-201ENST00000394767 CABP5Q9NP86 173 aa22.82■■□□□ 1.24
CXXC4-201ENST00000394767 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
CXXC4-201ENST00000394767 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
CXXC4-201ENST00000394767 RNF113AO15541 343 aaKnown RBP22.82■■□□□ 1.24
CXXC4-201ENST00000394767 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
CXXC4-201ENST00000394767 NMIQ13287 307 aaPredicted RBP22.82■■□□□ 1.24
CXXC4-201ENST00000394767 L1TD1Q5T7N2 865 aaKnown RBP22.82■■□□□ 1.24
CXXC4-201ENST00000394767 LARP1BQ659C4 914 aaKnown RBP22.82■■□□□ 1.24
CXXC4-201ENST00000394767 CCDC82Q8N4S0 544 aa22.82■■□□□ 1.24
CXXC4-201ENST00000394767 FEZ1Q99689 392 aa22.82■■□□□ 1.24
CXXC4-201ENST00000394767 ERFEQ4G0M1 354 aa22.81■■□□□ 1.24
CXXC4-201ENST00000394767 CTCFLQ8NI51 663 aaPredicted RBP22.81■■□□□ 1.24
CXXC4-201ENST00000394767 DDX11Q96FC9 970 aa22.81■■□□□ 1.24
CXXC4-201ENST00000394767 CYP19A1P11511 503 aaPredicted RBP22.81■■□□□ 1.24
CXXC4-201ENST00000394767 CCDC96Q2M329 555 aa22.81■■□□□ 1.24
CXXC4-201ENST00000394767 SUPT20HQ8NEM7 779 aa22.81■■□□□ 1.24
CXXC4-201ENST00000394767 CNKSR1Q969H4 720 aa22.81■■□□□ 1.24
CXXC4-201ENST00000394767 MMP10P09238 476 aa22.8■■□□□ 1.24
CXXC4-201ENST00000394767 SLC27A3Q5K4L6 730 aa22.8■■□□□ 1.24
CXXC4-201ENST00000394767 HLFQ16534 295 aa22.8■■□□□ 1.24
CXXC4-201ENST00000394767 SLC12A7Q9Y666 1083 aa22.8■■□□□ 1.24
CXXC4-201ENST00000394767 SSH3Q8TE77 659 aa22.8■■□□□ 1.24
CXXC4-201ENST00000394767 ARHGEF28Q8N1W1 1705 aaKnown RBP22.79■■□□□ 1.24
CXXC4-201ENST00000394767 PPIP5K2O43314 1243 aa22.79■■□□□ 1.24
CXXC4-201ENST00000394767 GPR162Q16538 588 aa22.79■■□□□ 1.24
CXXC4-201ENST00000394767 ESYT1Q9BSJ8 1104 aa22.79■■□□□ 1.24
CXXC4-201ENST00000394767 PLCG2P16885 1265 aa22.79■■□□□ 1.24
CXXC4-201ENST00000394767 CEBPZQ03701 1054 aaKnown RBP22.79■■□□□ 1.24
CXXC4-201ENST00000394767 CCDC73Q6ZRK6 1079 aa22.79■■□□□ 1.24
CXXC4-201ENST00000394767 LMOD1P29536 600 aaPredicted RBP22.78■■□□□ 1.24
CXXC4-201ENST00000394767 NCOA7Q8NI08 942 aa22.78■■□□□ 1.24
CXXC4-201ENST00000394767 BRPF1P55201 1214 aaPredicted RBP22.78■■□□□ 1.24
CXXC4-201ENST00000394767 LRRC24Q50LG9 513 aa22.78■■□□□ 1.24
CXXC4-201ENST00000394767 CCDC83Q8IWF9 413 aa22.78■■□□□ 1.24
CXXC4-201ENST00000394767 LARP6Q9BRS8 491 aaKnown RBP22.78■■□□□ 1.24
CXXC4-201ENST00000394767 STX8Q9UNK0 236 aa22.78■■□□□ 1.24
CXXC4-201ENST00000394767 CLEC4GQ6UXB4 293 aa22.77■■□□□ 1.24
CXXC4-201ENST00000394767 TPD52L1Q16890 204 aaPredicted RBP22.77■■□□□ 1.24
CXXC4-201ENST00000394767 NEK1Q96PY6 1258 aa22.77■■□□□ 1.24
CXXC4-201ENST00000394767 NARFQ9UHQ1 456 aa22.77■■□□□ 1.24
CXXC4-201ENST00000394767 ITSN1Q15811 1721 aa22.77■■□□□ 1.24
CXXC4-201ENST00000394767 CCDC196A0A1B0GTZ2 297 aa22.77■■□□□ 1.24
CXXC4-201ENST00000394767 EIF6P56537 245 aaKnown RBP22.77■■□□□ 1.24
CXXC4-201ENST00000394767 TMEM67Q5HYA8 995 aa22.77■■□□□ 1.24
CXXC4-201ENST00000394767 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.24
CXXC4-201ENST00000394767 MCM9Q9NXL9 1143 aa22.77■■□□□ 1.24
CXXC4-201ENST00000394767 CCDC47Q96A33 483 aaKnown RBP22.77■■□□□ 1.24
CXXC4-201ENST00000394767 RBM8AQ9Y5S9 174 aaKnown RBP22.77■■□□□ 1.24
CXXC4-201ENST00000394767 SUSD4Q5VX71 490 aa22.76■■□□□ 1.23
CXXC4-201ENST00000394767 WDR66Q8TBY9 1149 aa22.76■■□□□ 1.23
CXXC4-201ENST00000394767 HMG20BQ9P0W2 317 aa22.76■■□□□ 1.23
CXXC4-201ENST00000394767 DNTTIP2Q5QJE6 756 aaKnown RBP22.76■■□□□ 1.23
CXXC4-201ENST00000394767 ARHGEF1Q92888 912 aaKnown RBP22.76■■□□□ 1.23
CXXC4-201ENST00000394767 NDUFB9Q9Y6M9 179 aa22.76■■□□□ 1.23
CXXC4-201ENST00000394767 SKOR2Q2VWA4 1001 aaPredicted RBP22.76■■□□□ 1.23
CXXC4-201ENST00000394767 CATIPQ7Z7H3 387 aa22.76■■□□□ 1.23
CXXC4-201ENST00000394767 NIM1KQ8IY84 436 aa22.76■■□□□ 1.23
CXXC4-201ENST00000394767 SEC31BQ9NQW1 1179 aa22.75■■□□□ 1.23
CXXC4-201ENST00000394767 SEC63Q9UGP8 760 aaKnown RBP22.75■■□□□ 1.23
CXXC4-201ENST00000394767 WDHD1O75717 1129 aaPredicted RBP22.74■■□□□ 1.23
CXXC4-201ENST00000394767 CHRNDQ07001 517 aa22.74■■□□□ 1.23
CXXC4-201ENST00000394767 HOOK1Q9UJC3 728 aaKnown RBP22.74■■□□□ 1.23
CXXC4-201ENST00000394767 GOLGA8BA8MQT2 603 aa22.74■■□□□ 1.23
CXXC4-201ENST00000394767 PES1O00541 588 aaKnown RBP22.74■■□□□ 1.23
CXXC4-201ENST00000394767 COL15A1P39059 1388 aa22.74■■□□□ 1.23
CXXC4-201ENST00000394767 STK38Q15208 465 aa22.74■■□□□ 1.23
CXXC4-201ENST00000394767 WASF1Q92558 559 aa22.74■■□□□ 1.23
CXXC4-201ENST00000394767 GNAT2P19087 354 aa22.74■■□□□ 1.23
CXXC4-201ENST00000394767 PUS3Q9BZE2 481 aaKnown RBP22.74■■□□□ 1.23
CXXC4-201ENST00000394767 MBD4O95243 580 aa22.73■■□□□ 1.23
CXXC4-201ENST00000394767 CCT2P78371 535 aaKnown RBP22.73■■□□□ 1.23
CXXC4-201ENST00000394767 ADRA2BP18089 450 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms