RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 DDX11Q96FC9 970 aa13.51□□□□□ -0.25
PDCD4-202ENST00000393104 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
PDCD4-202ENST00000393104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.255e-8■□□□□ 10.4
PDCD4-202ENST00000393104 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
PDCD4-202ENST00000393104 UTYO14607 1347 aa13.51□□□□□ -0.25
PDCD4-202ENST00000393104 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
PDCD4-202ENST00000393104 ECHDC1Q9NTX5 307 aa13.51□□□□□ -0.25
PDCD4-202ENST00000393104 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 H2AFXP16104 143 aaPredicted RBP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 GABPB1Q06547 395 aaPredicted RBP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 V9GYY5 206 aaPredicted RBP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 LAMB4A4D0S4 1761 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 ZNF165P49910 485 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 KRT85P78386 507 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 FGD1P98174 961 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 HDGFL1Q5TGJ6 251 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 E4F1Q66K89 784 aaPredicted RBP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 EDC3Q96F86 508 aaKnown RBP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 TNMDQ9H2S6 317 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 FHOD1Q9Y613 1164 aa13.5□□□□□ -0.25
PDCD4-202ENST00000393104 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
PDCD4-202ENST00000393104 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 A0A0G2JLW4 131 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 STOX1Q6ZVD7 989 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 ANKRD24Q8TF21 1146 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 MRFAP1L1Q96HT8 127 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 L2HGDHQ9H9P8 463 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 CLIP2Q9UDT6 1046 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 PAXBP1Q9Y5B6 917 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 TAF5LO75529 589 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 DNAAF4Q8WXU2 420 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
PDCD4-202ENST00000393104 ZNF609O15014 1411 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 CAPN2P17655 700 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 CEP135Q66GS9 1140 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 CCAR2Q8N163 923 aaKnown RBP13.48□□□□□ -0.25
PDCD4-202ENST00000393104 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 UBXN6Q9BZV1 441 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
PDCD4-202ENST00000393104 EVI5LQ96CN4 794 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 GLI3P10071 1580 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 TULP2O00295 520 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 PDIA6Q15084 440 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 SPATA32Q96LK8 384 aa13.48□□□□□ -0.25
PDCD4-202ENST00000393104 DDX19AQ9NUU7 478 aaKnown RBP13.48□□□□□ -0.25
PDCD4-202ENST00000393104 ELF2Q15723 593 aa13.47□□□□□ -0.25
PDCD4-202ENST00000393104 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
PDCD4-202ENST00000393104 CICQ96RK0 1608 aaPredicted RBP13.47□□□□□ -0.25
PDCD4-202ENST00000393104 SCRN1Q12765 414 aa13.47□□□□□ -0.25
PDCD4-202ENST00000393104 ARMCX5Q6P1M9 558 aa13.47□□□□□ -0.25
PDCD4-202ENST00000393104 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
PDCD4-202ENST00000393104 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
PDCD4-202ENST00000393104 SUCLG2Q96I99 432 aa13.46□□□□□ -0.25
PDCD4-202ENST00000393104 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.25
PDCD4-202ENST00000393104 PALLDQ8WX93 1383 aa13.46□□□□□ -0.25
PDCD4-202ENST00000393104 MEGF6O75095 1541 aa13.46□□□□□ -0.25
PDCD4-202ENST00000393104 SLFNL1Q499Z3 407 aa13.46□□□□□ -0.25
PDCD4-202ENST00000393104 RCOR1Q9UKL0 485 aa13.46□□□□□ -0.25
PDCD4-202ENST00000393104 ECM29Q5VYK3 1845 aa13.46□□□□□ -0.25
PDCD4-202ENST00000393104 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.26
PDCD4-202ENST00000393104 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.26
PDCD4-202ENST00000393104 EPHA10Q5JZY3 1008 aa13.46□□□□□ -0.26
PDCD4-202ENST00000393104 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.26
PDCD4-202ENST00000393104 ZRANB2O95218 330 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDCD4-202ENST00000393104 KLHDC4Q8TBB5 520 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 SYTL4Q96C24 671 aaPredicted RBP13.45□□□□□ -0.26
PDCD4-202ENST00000393104 GOLGA6L6A8MZA4 724 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 PLA2G4AP47712 749 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 PLEKHO1Q53GL0 409 aaPredicted RBP13.45□□□□□ -0.26
PDCD4-202ENST00000393104 BRF1Q92994 677 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 NDUFB9Q9Y6M9 179 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 DISP2A7MBM2 1401 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 STK3Q13188 491 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 NCAPHQ15003 741 aa13.45□□□□□ -0.26
PDCD4-202ENST00000393104 SEC62Q99442 399 aaKnown RBP13.45□□□□□ -0.26
PDCD4-202ENST00000393104 OSBPL5Q9H0X9 879 aaPredicted RBP13.45□□□□□ -0.26
PDCD4-202ENST00000393104 WDR17Q8IZU2 1322 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 CCDC112Q8NEF3 446 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 AGXT2Q9BYV1 514 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 CYP21A2P08686 494 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 SKILP12757 684 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
PDCD4-202ENST00000393104 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
PDCD4-202ENST00000393104 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
PDCD4-202ENST00000393104 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
PDCD4-202ENST00000393104 EIF2S2P20042 333 aaKnown RBP13.43□□□□□ -0.26
PDCD4-202ENST00000393104 TRIM65Q6PJ69 517 aa13.43□□□□□ -0.26
PDCD4-202ENST00000393104 AACSQ86V21 672 aa13.43□□□□□ -0.26
PDCD4-202ENST00000393104 NSUN7Q8NE18 718 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms