RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 SNED1Q8TER0 1413 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 LTBP1Q14766 1721 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 POLA2Q14181 598 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 ARHGAP27Q6ZUM4 889 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 RTKN2Q8IZC4 609 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 SSH3Q8TE77 659 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 MINPP1Q9UNW1 487 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 SIL1Q9H173 461 aa31.59■■■□□ 2.65
HOMER3-202ENST00000392351 COPRSQ9NQ92 184 aa31.58■■■□□ 2.65
HOMER3-202ENST00000392351 NSFL1CQ9UNZ2 370 aaKnown RBP31.58■■■□□ 2.65
HOMER3-202ENST00000392351 GRIPAP1Q4V328 841 aa31.57■■■□□ 2.64
HOMER3-202ENST00000392351 LRRC24Q50LG9 513 aa31.57■■■□□ 2.64
HOMER3-202ENST00000392351 MPNDQ8N594 471 aa31.57■■■□□ 2.64
HOMER3-202ENST00000392351 ANKIB1Q9P2G1 1089 aa31.57■■■□□ 2.64
HOMER3-202ENST00000392351 GPSM2P81274 684 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 AAMPQ13685 434 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 DPP8Q6V1X1 898 aaPredicted RBP31.56■■■□□ 2.64
HOMER3-202ENST00000392351 SIRT2Q8IXJ6 389 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 CCDC88AQ3V6T2 1871 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 EYA2O00167 538 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 NFKBIEO00221 500 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 CHRNDQ07001 517 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 RIPOR2Q9Y4F9 1068 aa31.56■■■□□ 2.64
HOMER3-202ENST00000392351 DUOX1Q9NRD9 1551 aa31.55■■■□□ 2.64
HOMER3-202ENST00000392351 TAOK3Q9H2K8 898 aa31.55■■■□□ 2.64
HOMER3-202ENST00000392351 SBF1O95248 1867 aa31.54■■■□□ 2.64
HOMER3-202ENST00000392351 XDHP47989 1333 aa31.54■■■□□ 2.64
HOMER3-202ENST00000392351 HMMRO75330 724 aa31.54■■■□□ 2.64
HOMER3-202ENST00000392351 FBXO3Q9UK99 471 aa31.54■■■□□ 2.64
HOMER3-202ENST00000392351 PCDHB15Q9Y5E8 787 aa31.54■■■□□ 2.64
HOMER3-202ENST00000392351 RASSF7Q02833 373 aa31.53■■■□□ 2.64
HOMER3-202ENST00000392351 ANKRD2Q9GZV1 360 aa31.53■■■□□ 2.64
HOMER3-202ENST00000392351 CIAO1O76071 339 aa31.52■■■□□ 2.64
HOMER3-202ENST00000392351 FKBP4Q02790 459 aaKnown RBP eCLIP31.52■■■□□ 2.64
HOMER3-202ENST00000392351 HELBQ8NG08 1087 aaPredicted RBP31.52■■■□□ 2.64
HOMER3-202ENST00000392351 PSMD1Q99460 953 aa31.52■■■□□ 2.64
HOMER3-202ENST00000392351 PODXL2Q9NZ53 605 aa31.52■■■□□ 2.64
HOMER3-202ENST00000392351 MROH5Q6ZUA9 1318 aa31.52■■■□□ 2.64
HOMER3-202ENST00000392351 ATG9AQ7Z3C6 839 aa31.51■■■□□ 2.64
HOMER3-202ENST00000392351 LTBP3Q9NS15 1303 aa31.51■■■□□ 2.63
HOMER3-202ENST00000392351 TAF5LO75529 589 aa31.51■■■□□ 2.63
HOMER3-202ENST00000392351 METTL24Q5JXM2 366 aa31.51■■■□□ 2.63
HOMER3-202ENST00000392351 SURF6O75683 361 aaKnown RBP31.5■■■□□ 2.63
HOMER3-202ENST00000392351 GGA1Q9UJY5 639 aa31.5■■■□□ 2.63
HOMER3-202ENST00000392351 UFL1O94874 794 aa31.49■■■□□ 2.63
HOMER3-202ENST00000392351 IL15P40933 162 aaPredicted RBP31.49■■■□□ 2.63
HOMER3-202ENST00000392351 RTFDC1Q9BY42 306 aaPredicted RBP31.49■■■□□ 2.63
HOMER3-202ENST00000392351 POLLQ9UGP5 575 aa31.49■■■□□ 2.63
HOMER3-202ENST00000392351 C6orf229H3BNL8 230 aa31.48■■■□□ 2.63
HOMER3-202ENST00000392351 G3BP1Q13283 466 aaKnown RBP eCLIP31.48■■■□□ 2.63
HOMER3-202ENST00000392351 TBC1D16Q8TBP0 767 aa31.48■■■□□ 2.63
HOMER3-202ENST00000392351 NEFLP07196 543 aa31.47■■■□□ 2.63
HOMER3-202ENST00000392351 SUPT20HQ8NEM7 779 aa31.47■■■□□ 2.63
HOMER3-202ENST00000392351 ZNF277Q9NRM2 450 aaPredicted RBP31.47■■■□□ 2.63
HOMER3-202ENST00000392351 ATP2B4P23634 1241 aa31.47■■■□□ 2.63
HOMER3-202ENST00000392351 OS9Q13438 667 aaPredicted RBP31.47■■■□□ 2.63
HOMER3-202ENST00000392351 NOP58Q9Y2X3 529 aaKnown RBP31.47■■■□□ 2.63
HOMER3-202ENST00000392351 WTIPA6NIX2 430 aaPredicted RBP31.46■■■□□ 2.63
HOMER3-202ENST00000392351 KCNJ4P48050 445 aa31.46■■■□□ 2.63
HOMER3-202ENST00000392351 VGLL2Q8N8G2 317 aa31.46■■■□□ 2.63
HOMER3-202ENST00000392351 EXOC6BQ9Y2D4 811 aa31.46■■■□□ 2.63
HOMER3-202ENST00000392351 DICER1Q9UPY3 1922 aaKnown RBP31.46■■■□□ 2.63
HOMER3-202ENST00000392351 CHD4Q14839 1912 aa31.45■■■□□ 2.63
HOMER3-202ENST00000392351 GPR101Q96P66 508 aaPredicted RBP31.45■■■□□ 2.63
HOMER3-202ENST00000392351 LEMD3Q9Y2U8 911 aa31.45■■■□□ 2.63
HOMER3-202ENST00000392351 ZNF804BA4D1E1 1349 aa31.45■■■□□ 2.62
HOMER3-202ENST00000392351 SNAP23O00161 211 aa31.44■■■□□ 2.62
HOMER3-202ENST00000392351 PDE8BO95263 885 aa31.44■■■□□ 2.62
HOMER3-202ENST00000392351 PRELPP51888 382 aa31.44■■■□□ 2.62
HOMER3-202ENST00000392351 CEP126Q9P2H0 1117 aa31.44■■■□□ 2.62
HOMER3-202ENST00000392351 LMNB1P20700 586 aa31.43■■■□□ 2.62
HOMER3-202ENST00000392351 EYA3Q99504 573 aa31.43■■■□□ 2.62
HOMER3-202ENST00000392351 IARSP41252 1262 aaKnown RBP31.42■■■□□ 2.62
HOMER3-202ENST00000392351 WASHC4Q2M389 1173 aa31.42■■■□□ 2.62
HOMER3-202ENST00000392351 PPIP5K2O43314 1243 aa31.41■■■□□ 2.62
HOMER3-202ENST00000392351 TFCP2Q12800 502 aa31.41■■■□□ 2.62
HOMER3-202ENST00000392351 AOC3Q16853 763 aa31.41■■■□□ 2.62
HOMER3-202ENST00000392351 RIMBP2O15034 1052 aa31.4■■■□□ 2.62
HOMER3-202ENST00000392351 SASH1O94885 1247 aa31.4■■■□□ 2.62
HOMER3-202ENST00000392351 HSP90AB4PQ58FF6 505 aa31.4■■■□□ 2.62
HOMER3-202ENST00000392351 TIAM2Q8IVF5 1701 aa31.4■■■□□ 2.62
HOMER3-202ENST00000392351 UBE4AQ14139 1066 aa31.39■■■□□ 2.62
HOMER3-202ENST00000392351 PUM3Q15397 648 aaKnown RBP31.39■■■□□ 2.62
HOMER3-202ENST00000392351 KIAA2012Q0VF49 1180 aa31.39■■■□□ 2.61
HOMER3-202ENST00000392351 LARGE2Q8N3Y3 721 aa31.39■■■□□ 2.61
HOMER3-202ENST00000392351 ZC3H12CQ9C0D7 883 aaKnown RBP31.39■■■□□ 2.61
HOMER3-202ENST00000392351 VPS33BQ9H267 617 aa31.39■■■□□ 2.61
HOMER3-202ENST00000392351 RNF181Q9P0P0 153 aa31.39■■■□□ 2.61
HOMER3-202ENST00000392351 MED23Q9ULK4 1368 aa31.38■■■□□ 2.61
HOMER3-202ENST00000392351 APBB1O00213 710 aa31.38■■■□□ 2.61
HOMER3-202ENST00000392351 KLRK1P26718 216 aa31.38■■■□□ 2.61
HOMER3-202ENST00000392351 COL4A5P29400 1685 aa31.38■■■□□ 2.61
HOMER3-202ENST00000392351 HDAC1Q13547 482 aaPredicted RBP31.38■■■□□ 2.61
HOMER3-202ENST00000392351 C9orf131Q5VYM1 1079 aa31.38■■■□□ 2.61
HOMER3-202ENST00000392351 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.38■■■□□ 2.61
HOMER3-202ENST00000392351 ERC1Q8IUD2 1116 aa31.37■■■□□ 2.61
HOMER3-202ENST00000392351 ATP2B3Q16720 1220 aa31.36■■■□□ 2.61
HOMER3-202ENST00000392351 DCTPP1Q9H773 170 aa31.36■■■□□ 2.61
HOMER3-202ENST00000392351 ARAP2Q8WZ64 1704 aa31.36■■■□□ 2.61
HOMER3-202ENST00000392351 FGFR2P21802 821 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms