RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PDE12Q6L8Q7 609 aaKnown RBP2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 ZNF438Q7Z4V0 828 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 NBPF11Q86T75 865 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 C14orf37Q86TY3 774 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 SLC51AQ86UW1 340 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 NCAPG2Q86XI2 1143 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 GPR152Q8TDT2 470 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 NSUN5Q96P11 429 aaKnown RBP2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 ABI2Q9NYB9 513 aaPredicted RBP2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 ZFATQ9P243 1243 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 NAGPAQ9UK23 515 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 LRFN2Q9ULH4 789 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 ZMIZ1Q9ULJ6 1067 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 GSC2O15499 205 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 DYRK3O43781 588 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 NEFLP07196 543 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 HOXD8P13378 290 aaPredicted RBP2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 SELPP16109 830 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 PTPRAP18433 802 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 CDC27P30260 824 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 USP5P45974 858 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 IREB2P48200 963 aaKnown RBP2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 EHHADHQ08426 723 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 OCLNQ16625 522 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 RSPO4Q2I0M5 234 aaPredicted RBP2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 C8orf34Q49A92 452 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 NOM1Q5C9Z4 860 aaKnown RBP2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 CEP135Q66GS9 1140 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 OR13H1Q8NG92 308 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 HELQQ8TDG4 1101 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 WFDC12Q8WWY7 111 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 CEP41Q9BYV8 373 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 TPSG1Q9NRR2 321 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 USP20Q9Y2K6 914 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 PPME1Q9Y570 386 aa2.64□□□□□ -1.99
SNORD28B-201ENST00000390993 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 ZBTB42B2RXF5 422 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 J3QW42 95 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 SART1O43290 800 aaKnown RBP2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 FAM13AO94988 1023 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 GLB1P16278 677 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 CES1P23141 567 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 DNM1Q05193 864 aaKnown RBP2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 SF3B2Q13435 895 aaKnown RBP2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 COL9A3Q14050 684 aaPredicted RBP2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 SHISA2Q6UWI4 295 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 ETFBKMTQ8IXQ9 262 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 Q8N3U1 123 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 CCDC82Q8N4S0 544 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 KLHL23Q8NBE8 558 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 NUDT16Q96DE0 195 aaKnown RBP2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 SAP130Q9H0E3 1048 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 AKTIPQ9H8T0 292 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 ELP3Q9H9T3 547 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 KCNMB2Q9Y691 235 aa2.63□□□□□ -1.99
SNORD28B-201ENST00000390993 ARID3CA6NKF2 412 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 DLL1O00548 723 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 TNFRSF10BO14763 440 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 DHX15O43143 795 aaKnown RBP2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 EDN3P14138 238 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 MZF1P28698 734 aaPredicted RBP2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 GRNP28799 593 aaKnown RBP2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 CD68P34810 354 aaPredicted RBP2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 HNRNPUQ00839 825 aaKnown RBP eCLIP2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 FAM69CQ0P6D2 419 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 TRIP4Q15650 581 aaPredicted RBP2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 GRIK5Q16478 980 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 PRSS36Q5K4E3 855 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 NKAPLQ5M9Q1 402 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 TMEM130Q8N3G9 435 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 GIMAP7Q8NHV1 300 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 WNT8BQ93098 351 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 LACRTQ9GZZ8 138 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 ZFP64Q9NPA5 681 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 SEC31BQ9NQW1 1179 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 TRIM33Q9UPN9 1127 aa2.62□□□□□ -1.99
SNORD28B-201ENST00000390993 LINC01387J3KSC0 135 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 GAS2O43903 313 aaKnown RBP2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 PHACTR2O75167 634 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 KIF4AO95239 1232 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 ABL1P00519 1130 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 NOS3P29474 1203 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 GRIK1P39086 918 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 PIP4K2BP78356 416 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 SRPK2P78362 688 aaKnown RBP2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 DUOXA2Q1HG44 320 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 UVSSAQ2YD98 709 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 HP1BP3Q5SSJ5 553 aaPredicted RBP2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 XKR5Q6UX68 686 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 ACAD11Q709F0 780 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 DDX54Q8TDD1 881 aaKnown RBP2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 SNX29Q8TEQ0 813 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 GTF3C2Q8WUA4 911 aaPredicted RBP2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 EDEM1Q92611 657 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 PBX4Q9BYU1 374 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 ZFYVE1Q9HBF4 777 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 SEPT3Q9UH03 358 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 USTQ9Y2C2 406 aa2.61□□□□□ -1.99
SNORD28B-201ENST00000390993 F8W735 103 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms